Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2416 | ATGGGGTGTGTGAACACGAAGCAGGCGGTGTCCGTTACGCCTGCATTCGATCACTCCGGTGTGTTTCGGGACAATGAATCGACGGCGATGGGCAACTCGGGTCGGAGCCAACTTGGGTTTGGAGAGATTGAGAAGGGTTCGAAGCCGAAGGCCAAGACGAAGACGAAGGGGTCCAGTGAATTCAATGGGGTTGCGAGCGAGTTCGGTGAGTCGGGTCGGGCGAGTTCTAATGGCGGAGGGAATGAGACTTTGAGCTTCAGATTGGGGAATTTGAATAAGTATATGGAAGGCGAGCAAGTGGCGGCGGGGTGGCCGGTTTGGCTCAGCGCCGTCGCCGGTGAAGCCATTCAGGGTTGGGTTCCACTCCGGTCTGATGCCTATGAGAAGTTGGAAAAGATTGGACAAGGTACATACAGCAGCGTATTCCGAGCACGTGAACTTGAAACGGGGAGGATAGTAGCTTTAAAGAAGGTTCGGTTCGATAATTTTGAGCCTGAAAGTGTTCGGTTTATGGCACGAGAGATAATGATTCTCCGCAGGCTTGATCACCCCAACATCATCAAATTGGAGGGCTTGATTACATCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGACCATGACATTACTGGACTCCTGTCCTGCCCCGATATCACTTTTAGTGAATCACAGATTAAATGCTACATGAAACAATTGTTATCCGGGCTTGAGCATTGTCACTCACGTGGCGTAATGCATCGGGATATTAAAGGATCTAATCTTCTAGTCAATAATGAAGGGGTATTGAAGGTGGCTGATTTTGGATTGGCAAACTTTTGTAATTCCAGCCACCGGCAACCTCTAACCAGTCGTGTTGTCACTCTATGGTATCGTCCTCCTGAACTTCTACTGGGTTCAACAGACTATAATGCATCTGTGGATATTTGGAGTGTTGGCTGTGTTTTCGCAGAACTCCTTGTTGGGAAGCCTATTCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGCGGCTCTCCTCCTGATGAATACTGGAAAAAATCTAAACTTCCTCATGCCACTTTGTTCAAGCCACAACATCCTTATAATAATTGTTTACGGCAGACCTTCAAAGATTATCCTTCGACAACTGTGAACTTGTTAGAAACTCTTCTTTCCATCGAACCATACAAGCGTGGAGTTGCCTCCTCTGCTCTCACATCTGAGTATTTCAGTACAAAACCGTATGCGTGCGATCCATCAAGCATGCCGATATATCCACCTAGCAAAGAGATTGATGCCAAACAAAGAGAGGAGTCTAGAAGGAAAAAAGGTAGTGGAAGATCCCGTGGTCTAGATAGCAGAAGGTTAACGCGAAAGCATCTTGGAATCAGTAAATTGGCACCAGCAGAGGACTTATCGGTCTCAGCTCGAGATTTGCATAAAATTAGTATTAATGCACAAAATCTTAAAGAAGAAAACGCTATCAAAGGTGGCGAGGTGCAAAAGCTGCCGATTGATAAATTGGAAGAGTCTATCCATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCCCTACAAGTTTCTACATCAAGTGGATTTGCATGGGCAAGACGACGAAGAGACGATGCCTCTATTAGATCGCATTCGAGATCAATTTCACGTGGACACCTAATTAATGGGCTGGACCATTCTGCTATATTGCATTCAAGAAGCAATGTGGACTCTAAGTTTCATGAAAAGGGAGACATGTCGTCCATCAGCCGCTCAAGTTCCAAGGGTCATGAATCAAATGAGAGATCCAAGGTTGTGATACGGAATCAGTGGGGCAAGTTTGAGCGTCCTGATTCGTTTGATACTTCGGATGAGTACCACTCACAGGAATTTGCAGTGGCACTTTACTTGCGAGATGAAATGGAAGCTAAGAGGAGTAATCTGAGTTATCAGGACCAAGTGGACAAAGTTGAATATTCTGGGCCCTTGTTATCTCAATCTAGCAGAGTGGATGAACTGCTAGACAGACATGAGAGGCACATCCGACAGACAGTTCGAAGATCGTGGTTCCAAAGAGGTAAAAATTGA | 2091 | 45.77 | MGCVNTKQAVSVTPAFDHSGVFRDNESTAMGNSGRSQLGFGEIEKGSKPKAKTKTKGSSEFNGVASEFGESGRASSNGGGNETLSFRLGNLNKYMEGEQVAAGWPVWLSAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSSVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSSHRQPLTSRVVTLWYRPPELLLGSTDYNASVDIWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDYPSTTVNLLETLLSIEPYKRGVASSALTSEYFSTKPYACDPSSMPIYPPSKEIDAKQREESRRKKGSGRSRGLDSRRLTRKHLGISKLAPAEDLSVSARDLHKISINAQNLKEENAIKGGEVQKLPIDKLEESIHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDDASIRSHSRSISRGHLINGLDHSAILHSRSNVDSKFHEKGDMSSISRSSSKGHESNERSKVVIRNQWGKFERPDSFDTSDEYHSQEFAVALYLRDEMEAKRSNLSYQDQVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRGKN | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 75359941 | 75365660 | + | Tan0021999.1 | Tan05g2416 | 753724 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2416 | 696 | MobiDBLite | consensus disorder prediction | 431 | 456 | - | - | |
Tan05g2416 | 696 | MobiDBLite | consensus disorder prediction | 56 | 81 | - | - | |
Tan05g2416 | 696 | ProSiteProfiles | Protein kinase domain profile. | 127 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2416 | 696 | MobiDBLite | consensus disorder prediction | 578 | 604 | - | - | |
Tan05g2416 | 696 | FunFam | probable serine/threonine-protein kinase At1g54610 | 210 | 450 | - | - | |
Tan05g2416 | 696 | FunFam | probable serine/threonine-protein kinase At1g54610 | 114 | 209 | - | - | |
Tan05g2416 | 696 | Gene3D | Transferase(Phosphotransferase) domain 1 | 210 | 449 | - | - | |
Tan05g2416 | 696 | PANTHER | CELL DIVISION PROTEIN KINASE | 127 | 411 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Tan05g2416 | 696 | CDD | STKc_CDK9_like | 127 | 411 | - | - | |
Tan05g2416 | 696 | SMART | serkin_6 | 127 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2416 | 696 | SUPERFAMILY | Protein kinase-like (PK-like) | 121 | 417 | IPR011009 | - | |
Tan05g2416 | 696 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 247 | 259 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g2416 | 696 | Pfam | Protein kinase domain | 127 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g2416 | 696 | MobiDBLite | consensus disorder prediction | 18 | 81 | - | - | |
Tan05g2416 | 696 | ProSitePatterns | Protein kinases ATP-binding region signature. | 133 | 156 | IPR017441 | GO:0005524(InterPro) | |
Tan05g2416 | 696 | MobiDBLite | consensus disorder prediction | 421 | 456 | - | - | |
Tan05g2416 | 696 | Gene3D | Phosphorylase Kinase; domain 1 | 114 | 209 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2416 | Tan-Chr5:75359941 | Tan11g0460 | Tan-Chr11:3722755 | 2.90E-189 | dispersed | |
Tan05g2416 | Tan-Chr5:75359941 | Tan05g2417 | Tan-Chr5:75359941 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67660 | PF00069 | Pkinase | 4.60E-69 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2416 | - | - | - | 0.0 |