Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2418 ATGGCGCTGTTTAGAAAATTATTCTACCGGAAGCCTCCAGATCGGCTTCTCGAGATCGCCGAGAGAGTGTACGTGTTTGATTGTTGTTTCTCTACCGACGTCTTGGAAGAGGATGAGTACAAAGGGTACTTGGCTAGCATTGTACCAAAGCTGCAAGACCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTTAGTGAACGAAAGAGGAAGACTAGAACTTCAGATACATTGTCTCATTATGGTATGACAGTTATGGAATATCCTCTGCAATTTGAAGGCTGTCCTCTACTGCCATTCGAGATGATCCACCACTTCATTCGGTCGAGTGAAAGCTGGTTGTCCTTGGAGAGACAGAAAAATGTATTGTTGATGAACTGTGAGCGAGGAGGATGGCCAATCCTTGCTTTCATGCTATCAGGTCTCTTACTGTACCGTAAACAATATGAGGGGGAGCAGAAGACCCTTGAAATGGTCTATAGGCAAGCTCCTAGAGAACTTTTCCATGTTCTTTCTCCTGTAAACTCACAGCCTTCTCAAATGAGATACCTTCAGTATATTTCTAGGAGAAATCTACGTTCTGATTGGCCTCCACCTGATACACCTCTAATTTTTGACTGTCTGATACTTCGAGACCTTCCTATGCTTGATAGAGGAAAAGAGTGCAGGCTTGTCATACGCATTTACGGTCAGGACCCGTTAACACCACGAAATAGAAGTCCAAAACTCGTTTTTTCTAGTGCAAAGATGAAAAGACAGGGTTGCCAGTATATACAGGCAGGAAGCGGACTGGTAAAAATGGACGTCCATTGTCATGTTCAAGGGGATGTTGTTCTTGAGTGCATCCATTTAGATGGAGATCAAATACACGAGGAAGTGATCTTTAGAGTTATGTTTCACACGGCGTTTGTGCATTCAAACAGTTTGAAGCTCAATCGTGATGAGGTTGATGTTATATGGGATGCCAAGGAGCAGTTTCCTAAAGATTTTAGAGCAGAGGTACTTTTTCTGGATGCTGATGATGTTGTACCAAACCTCTCTACAGCGACAAAAAGTGATGAAAAAATTGAAATCGAAAGCAATTCGACTGAGGAGTTTTTCGAAGTGGAAGAAATATTTAGCAATATTGTTGACGTGCAGGAAGTTAAGAGGGACTACGATGTTCAAATGGTACATGCAAACGCAACTGATGATATTGACCATCAAGCAGTTTGGAAGGAGGATGCAGATCCTCCTACATTCCAACGCTGTAAATCTTTTGGAGGGAGTCAAAACTTGGACAAGAAAATGGATTGTAACGTTGAAGCAGTGAAGGACATAGCTGTTGATGACATGACTTTCAAGACAGATGGAAAAGTGGACTCTGGTCTTCATGTAGTGAAGGACATTGTTGTGGATTATGGAGAAAAAAAGCCAAATTCTCTGCTATTTTCTGTTAATGTACTGAGACGTGTGGGAATCAAGGAACTGATAGACGATGCTTACGAAAAGTTGGAAGGGGTAGAGCATAAAGGGTACAGAGAAGATGCTTCTATTTCAGACTTTGAATCAAAGGTTCCTGCAAAAAAGTTGGATTCTGATTTATGGAGGCTTAAGTATGAGAAGTCGCAGTCACTAGCATCAAGGAAACAGCCTTCATCAACAGTTAAGCTAATAAATCATACAACTGTGGCTAAACAGAAGACCAAACAGCCAGAAGATCAGGACTTCCTTATAAAACAGGCAAAACCAAATACACTTTCTAGATGGACTGCACATGACAAAGAATCTTGCATAAACTCCATGCATGTGTTTTATCCACCATCAAGGCACACCAGTGCCTCAGCAACATCTATCAGTTCTCCTACTAGAGATTCTTATTCATATTCAACTTCAAAATCTGCTTCTGCTACTTTAGGACTGCTGCTGTCAACTGAAACAGCTGATGAACAAAAAAGTAACAAGGTGAGTCCGAAAAAACCTTTATGGTCTGCAACAGATATTCTCACGAGTAAAACACAATCACCACTTGGCTCCCCAAGACCATTGCCAAATGCTGTTCTGCATCAAGATCCTACTTTCCCTCTATCTCCAACTACACTTCTCCAGCCACCAGCTCTTCGAACTAACGCATCTTTCTTGCATGCATCATCTCCTAAATCTTCTTTGTCACCCCCTTCATATTTTCACATAAATGCAAGATCTCCTCCTCCACCTCCACCACCACCTCCTCCACCTTCCATTCACGTGGCACCTAAAAGTTCAGCATTGGTGTATGGAAATACGCTTAAGCAAAGGGCTCCACCGATACCACCTCCGCCTCCTGTACGTAGAGCTCAACCACAATTACCTCCCCCACGGCCACCCCCTTCACATGGAGCTCTGATTTCTCCACGCCCATCAAATGCTGGAGCTTTGCCGCCACCCCCTCCCCCACCTCCTCCAATTCAGAGGGCAGCTCCTCCACATTTAACCCAGGGGCGACAGGCTTTAACATCTACAACAACCTCTGTAGTTTCATCATCCTTGCCATCAATTTGTGATGCACCTTCACCTCCTCAACCTACTACTGGTCCCCTTCCACTGGTTCCTTCTCCTTCCAGACCTTCAGGAGCTAAAGGAGTAAGTTCTTCAACTGATGTGAAAACATCATCTATAGTGAGGGGACGTGGGTTCTCACGGTCAGTGGGCATGGGGGTTGCTGCTACAGTGCCTCAACGATCATCATTAAAGCCTCTGCACTGGAGCAAGGTCACTCGGGTACTACAAGGAAGCTTATGGGAAGAATTGCAAAGATCTGGAGATCCTGAAAGTGCACCGGAATTTGATGTATCTGAGCTGGAGACACTTTTCTCTGTCGTTGTCCCTAAACCTATTGTTGATTCAGGAGGTAAATCTGGAGGACGAAGGAAGTCAGTTGGATCAAAATTGGACAAAGTTCACTTGATTGATCTTAGGAGGGCAAATAACACTGAAATCATGCTAACAAAAGTTAGGATGCCACTATCTGACATGATGGCAGCAGTACTCTCCATGGATGAGTCTGTATTAGATGTAGACCAAGTGGAAAATCTTATCAAATTTTGCCCCACCAAAGAGGAGATGGAGCTTCTCAAGGGATATGGTGGTGACAAGGATAAACTTGGAAAATGCGAACAGTACTTTTTGGAGATGATGCAAGTTCCTCGTGTGGAGTCGAAGTTAAGAGTGTTCTCTTTCAAGATTCACTTCAGCTCTCAGATAGTAGAGTTCAAAAAAAGCCTAAACACTGTAAACTCTGTCTGTCAAGAGGTGAAAAATTCTTGCAAATTGAAGGAGATATTGAAGAGAATTCTTTGCCTAGGAAATATGCTGAACCAAGGAACTGCTAGGGGTTCTGCAATTGGATTCAGGTTGGATAGTCTCTCAAAACTCACTGATACACGTGCTTCTAACAATAAGATGACTCTCATGCATTATCTCTGTAAGGTCCTTGCTTCGAAGTCACCATCACTTCTTGATTTTCATCTGGACCTTGGTAGCTTGGAAGCTGCGTCTAAGATACAATTGAAATCTTTGGCAGAAGAAATGCAAGCAATAACAAAAGGATTGGAAAAGGTGAAGCAGGAACTAGTTGCATCTGAAAGCGATGGCCCCATCTCTGAAACTTTTCGTAAGACATTGAAAGGATTTGTTACTCTTGCCAAGACAGAGGTGGAATCTGTGACAGTTCTTTACTCGGTGGCGGGTAGAAATGCTGATGCACTTGCACTTTATTTTGGCGAGGATCCTGCCCGTTGTCCATTTGAACAAGTTACAGGAACTCTCTTCCATTTTACAAGGTCCTTTCTGAAAGCACATGAAGAGAATTGCAAGCAGTTAGAAATAGAGATGAGAAGGCTGAGAAAATAG 3870 43.07 MALFRKLFYRKPPDRLLEIAERVYVFDCCFSTDVLEEDEYKGYLASIVPKLQDHFPDASFMVFNFSERKRKTRTSDTLSHYGMTVMEYPLQFEGCPLLPFEMIHHFIRSSESWLSLERQKNVLLMNCERGGWPILAFMLSGLLLYRKQYEGEQKTLEMVYRQAPRELFHVLSPVNSQPSQMRYLQYISRRNLRSDWPPPDTPLIFDCLILRDLPMLDRGKECRLVIRIYGQDPLTPRNRSPKLVFSSAKMKRQGCQYIQAGSGLVKMDVHCHVQGDVVLECIHLDGDQIHEEVIFRVMFHTAFVHSNSLKLNRDEVDVIWDAKEQFPKDFRAEVLFLDADDVVPNLSTATKSDEKIEIESNSTEEFFEVEEIFSNIVDVQEVKRDYDVQMVHANATDDIDHQAVWKEDADPPTFQRCKSFGGSQNLDKKMDCNVEAVKDIAVDDMTFKTDGKVDSGLHVVKDIVVDYGEKKPNSLLFSVNVLRRVGIKELIDDAYEKLEGVEHKGYREDASISDFESKVPAKKLDSDLWRLKYEKSQSLASRKQPSSTVKLINHTTVAKQKTKQPEDQDFLIKQAKPNTLSRWTAHDKESCINSMHVFYPPSRHTSASATSISSPTRDSYSYSTSKSASATLGLLLSTETADEQKSNKVSPKKPLWSATDILTSKTQSPLGSPRPLPNAVLHQDPTFPLSPTTLLQPPALRTNASFLHASSPKSSLSPPSYFHINARSPPPPPPPPPPPSIHVAPKSSALVYGNTLKQRAPPIPPPPPVRRAQPQLPPPRPPPSHGALISPRPSNAGALPPPPPPPPPIQRAAPPHLTQGRQALTSTTTSVVSSSLPSICDAPSPPQPTTGPLPLVPSPSRPSGAKGVSSSTDVKTSSIVRGRGFSRSVGMGVAATVPQRSSLKPLHWSKVTRVLQGSLWEELQRSGDPESAPEFDVSELETLFSVVVPKPIVDSGGKSGGRRKSVGSKLDKVHLIDLRRANNTEIMLTKVRMPLSDMMAAVLSMDESVLDVDQVENLIKFCPTKEEMELLKGYGGDKDKLGKCEQYFLEMMQVPRVESKLRVFSFKIHFSSQIVEFKKSLNTVNSVCQEVKNSCKLKEILKRILCLGNMLNQGTARGSAIGFRLDSLSKLTDTRASNNKMTLMHYLCKVLASKSPSLLDFHLDLGSLEAASKIQLKSLAEEMQAITKGLEKVKQELVASESDGPISETFRKTLKGFVTLAKTEVESVTVLYSVAGRNADALALYFGEDPARCPFEQVTGTLFHFTRSFLKAHEENCKQLEIEMRRLRK 1289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 75369701 75381846 + Tan0019620.1 Tan05g2418 753726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2418 1289 Coils Coil 1176 1196 - -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 819 840 - -
Tan05g2418 1289 SMART PTEN_C2_2 198 338 IPR014020 -
Tan05g2418 1289 SMART it6_source 893 1288 IPR015425 -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 709 879 - -
Tan05g2418 1289 Gene3D - 205 336 - -
Tan05g2418 1289 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 759 788 - -
Tan05g2418 1289 Pfam C2 domain of PTEN tumour-suppressor protein 198 336 IPR014020 -
Tan05g2418 1289 Gene3D Formin, FH2 domain 891 1280 IPR042201 -
Tan05g2418 1289 Pfam Formin Homology 2 Domain 897 1269 IPR015425 -
Tan05g2418 1289 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Tan05g2418 1289 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 665 696 - -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 841 859 - -
Tan05g2418 1289 PANTHER FORMIN-J 1 1285 IPR051144 -
Tan05g2418 1289 ProSiteProfiles Formin homology-2 (FH2) domain profile. 893 1289 IPR015425 -
Tan05g2418 1289 SUPERFAMILY Formin homology 2 domain (FH2 domain) 800 1288 - -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 724 743 - -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 795 813 - -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 603 623 - -
Tan05g2418 1289 MobiDBLite consensus disorder prediction 863 879 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2418 Tan-Chr5:75369701 Tan09g1556 Tan-Chr9:67424989 3.40E-252 dispersed
Tan09g2089 Tan-Chr9:71269366 Tan05g2418 Tan-Chr5:75369701 4.60E-31 transposed
Tan05g2418 Tan-Chr5:75369701 Tan09g2088 Tan-Chr9:71256094 1.10E-282 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2418 K28090 - csv:101221127 2032.68