Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2424 ATGAACCGTACATTCAATTCATACCCAGATGAAAATTATGCAAATATCAGGAGATTGATGAGGCAGAGTGAGGATGATCACAAGAGCCTATCGGACAAGGATCCGCTCAGTGATTTGAAGAGTAACCAAGAAATGAAATGTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGTGGTTTTGATGATGTTCATTTCTGTGATCTTTTCGGTCTCTGTGGTTCTTAGAGACCCGCCATCGGATGCTGTAATTGAAGGTTCAGATGTGTGGATTTCTCAGTGGAATTCTGAACCAGATTCTAAGGATGGCGATCTTCATTCGGTTATAGAGCCAGTTGATAAACTGCTCAGTGGCCTTCTTTCTGCCAAACATGGTGTAGGTTCTTGTCTCAGTAGGTACAGTTCAGTTGCTTATCAGCACAAGCTGGCTTATGAACCCTCTTCTTATCTAATCTCCAAATTGCGAAGTTACGAAGATCTTCATAAGCGTTGTGGAGTTTATACCGAATCTTACAACAAAACTTTGGAGCAGCTTAGGTCTAATGGTAATAGCAGCACCTCAGACTGTAAATATCTTCTGTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACTCTCGCGTCGGCGTTTCTTTATGCTCTTCTCACAAATCGTGTCCTACTAGTTGACCCTGGAACTGACATGGCTGATCTCTTTTGTGAACCATTTCCTGAGGTTTCCTGGTTTCTCCCCCAAGATTTCCTATTAAAAGATGAGTTCAGCAACTTCAACCAGAACTCTCCTAATTGCTATGGGAAAATAGTGAAGAATAGCATGACAACAGATTCGAGCGGAATGATCTTGCCATCTGTTGTTTATCTTCATTTGCTCCATGATTATGATGACGATGATAAGCTTTTTTTCTGTGATCAAGACCAAGCTCTTCTGCAGAAATCGCCTTGGCTTGCTATGAAAACAGACAACTATTTTGTGCCATCTCTCTTTTTGATCCCATCGTTTGAAAAAGAACTTAATGATCTTTTCCCAAATAAAGATACAGTCTTCCACTTCTTGGGTCGATATCTGTTTCACCCTACGAATTCGGTTTGGGGACTGATTACAAGATATTATCAAGCTTACTTGGCTAGAGCTAGTGAAAGAATAGGCATTCAGATTAGAGTGTTTGATAGAGGGACTGGACCTTTTCAACACATCCTGGATCAGGTTCTGGCCTGTACCCTGAAGGAGAATCTGTTGCCAAAAACCGATAGGCAGACGAATATCATCAGTCCAGCTAGTAATCCAAAGTCGAAGGCCGTGCTGATAACTTCCCTGAGCGCTGGTTACTTCGAGAAGTTGAGAGACATTTACTGGGAGAATCCGACAGTGACGGGAGAGAGAATTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACTGAGAAGAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTGATGTATTGGTCACAAGCTCATGGTCGACTTTCGGATATGTGGCTCAAGGTCTTGGCGGTCTGAAACCATGGATATTATACAAACCCGAGAATCAGACTGCACCCGATCCACCTTGTCGTCGAGCCATGTCCATGGAGCCCTGTTTCCATGCACCTCCTTTCTACGACTGCAAGGCTAAGAAAGGAGTGGACACTGGTAAACTTGTTCCTCATGTGAGGCATTGTGAGGACATGGCCTGGGGGCTTAAGCTGGTTGATCAATATGATTGA 1752 42.87 MNRTFNSYPDENYANIRRLMRQSEDDHKSLSDKDPLSDLKSNQEMKCGFSSIRVMGMFVVLMMFISVIFSVSVVLRDPPSDAVIEGSDVWISQWNSEPDSKDGDLHSVIEPVDKLLSGLLSAKHGVGSCLSRYSSVAYQHKLAYEPSSYLISKLRSYEDLHKRCGVYTESYNKTLEQLRSNGNSSTSDCKYLLWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFLLKDEFSNFNQNSPNCYGKIVKNSMTTDSSGMILPSVVYLHLLHDYDDDDKLFFCDQDQALLQKSPWLAMKTDNYFVPSLFLIPSFEKELNDLFPNKDTVFHFLGRYLFHPTNSVWGLITRYYQAYLARASERIGIQIRVFDRGTGPFQHILDQVLACTLKENLLPKTDRQTNIISPASNPKSKAVLITSLSAGYFEKLRDIYWENPTVTGERISFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENQTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMAWGLKLVDQYD 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 75408324 75412020 + Tan0015375.1 Tan05g2424 753732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2424 583 FunFam Galactoside 2-alpha-L-fucosyltransferase 187 238 - -
Tan05g2424 583 Pfam Xyloglucan fucosyltransferase 107 552 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Tan05g2424 583 Gene3D - 186 240 - -
Tan05g2424 583 PANTHER FUCOSYLTRANSFERASE 2-RELATED 46 581 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Tan05g2424 583 Gene3D - 366 535 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0973 Tan-Chr1:9484535 Tan05g2424 Tan-Chr5:75408324 1.30E-147 dispersed
Tan04g1055 Tan-Chr4:9399811 Tan05g2424 Tan-Chr5:75408324 4.40E-199 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2424 K13681 - csv:101219153 1047.34