Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2431 ATGGCAACTGTCATGACCCAGGCTTCGGCCGTCTTCCGACCATGTGCGTCGAGATCGAGGTTCCTTTCGGGGTCGTCAAGAAAGTTTAACAGAACTTTGTCTGTTAAGCCAACAACTTCTCCAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAGGGAGAGTGGCTACCAGGTTTGCCATCACCAGCTTACCTTGATGGCAGTCTAGCAGGTGACAATGGATTTGATCCTCTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTAGTGAATGGTCGATGGGCGATGCTCGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAATATTTCGCATCGTCGTCGACTCTCTTTGTGATTGAGTTCATTCTGTTTCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAATCCACTCAACTTTGAGCCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTACAGATCCATGGCACAACACTATTCTCCAAACACTAAGGGGATAG 753 45.82 MATVMTQASAVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 75463232 75464150 + Tan0022228.1 Tan05g2431 753739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2431 250 Gene3D Chlorophyll a/b binding protein domain 62 241 - -
Tan05g2431 250 SUPERFAMILY Chlorophyll a-b binding protein 52 248 - -
Tan05g2431 250 FunFam Chlorophyll a-b binding protein, chloroplastic 62 241 - -
Tan05g2431 250 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 30 244 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Tan05g2431 250 Pfam Chlorophyll A-B binding protein 62 221 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2431 Tan-Chr5:75463232 Tan09g1055 Tan-Chr9:62798005 7.50E-55 dispersed
Tan02g1837 Tan-Chr2:84416418 Tan05g2431 Tan-Chr5:75463232 3.00E-54 transposed
Tan05g2431 Tan-Chr5:75463232 Tan09g2110 Tan-Chr9:71467726 2.90E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2431 K08910 - csv:101218675 471.855