Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2431 | ATGGCAACTGTCATGACCCAGGCTTCGGCCGTCTTCCGACCATGTGCGTCGAGATCGAGGTTCCTTTCGGGGTCGTCAAGAAAGTTTAACAGAACTTTGTCTGTTAAGCCAACAACTTCTCCAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAGGGAGAGTGGCTACCAGGTTTGCCATCACCAGCTTACCTTGATGGCAGTCTAGCAGGTGACAATGGATTTGATCCTCTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTAGTGAATGGTCGATGGGCGATGCTCGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTTTGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAATATTTCGCATCGTCGTCGACTCTCTTTGTGATTGAGTTCATTCTGTTTCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAATCCACTCAACTTTGAGCCAACTCTTGAGGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGTTGGCATTCTTGGGATTCATTGTTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTACAGATCCATGGCACAACACTATTCTCCAAACACTAAGGGGATAG | 753 | 45.82 | MATVMTQASAVFRPCASRSRFLSGSSRKFNRTLSVKPTTSPVPSSFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHITDPWHNTILQTLRG | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 75463232 | 75464150 | + | Tan0022228.1 | Tan05g2431 | 753739 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2431 | 250 | Gene3D | Chlorophyll a/b binding protein domain | 62 | 241 | - | - | |
Tan05g2431 | 250 | SUPERFAMILY | Chlorophyll a-b binding protein | 52 | 248 | - | - | |
Tan05g2431 | 250 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 62 | 241 | - | - | |
Tan05g2431 | 250 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 30 | 244 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Tan05g2431 | 250 | Pfam | Chlorophyll A-B binding protein | 62 | 221 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2431 | Tan-Chr5:75463232 | Tan09g1055 | Tan-Chr9:62798005 | 7.50E-55 | dispersed | |
Tan02g1837 | Tan-Chr2:84416418 | Tan05g2431 | Tan-Chr5:75463232 | 3.00E-54 | transposed | |
Tan05g2431 | Tan-Chr5:75463232 | Tan09g2110 | Tan-Chr9:71467726 | 2.90E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2431 | K08910 | - | csv:101218675 | 471.855 |