Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2466 ATGCTTCTCCCACTCTTCTTCTTCCTCTCCACCTTCCTCTCAAACCCTTCTCTCCTCTCCCTTTCCCTCTCCCAAGAAGGCCTTTATCTCCACACCATCAAGCTCTCTCTCGACGACCCTGATTCCTCCCTCCGATCATGGAACGACCGCGACGACACTCCCTGTTCCTGGTTCGGCGTCTCTTGCGACCCCAAAACCAACTCCGTCCACTCCCTCGACCTCTCCAACACCAATATAGCCGGCCCATTTCCCTCCCTGCTCTGCCGCCTCCAGAATCTCTCTTCCCTCTCTCTTTACAACAATTCCATCAACATGTCCCTTCCTTCTGTTATTTCCGACTGTTCTAGCCTCCAGCATCTCGACCTCTCTCAGAATCTCCTCACCGGCGAGCTTCCCAGTTCGATTTCTGATCTTCCGAACCTCCGGTATTTGGATTTGACTGGGAATAACTTCTCCGGCGACATTCCGGCGAGTTTCGCCCGGTTTCGGAAGTTGGAGGTTCTGTCTCTTGTTTATAATCTTCTCGATGGGCCGGTGCCGGCGTTTCTCGGCAACATTACGTCGTTGAAGATGTTGAACCTGTCTTACAACCCGTTTGAGCCGAGCCGGATCCCGCCGGAGTTCGGGAATTTGACGAATCTTGAGGTGCTTTGGCTGACTCAGTGTAATTTGGTTGGGGAAATTCCGCAGTCTCTTGGTCGGTTGAAACGGCTGACCGATTTGGACTTGGCGTTGAATAATCTTTATGGTCCAATTCCAAAGTCACTGACGGAGTTGAGTAGTGTGGTTCAGATTGAGTTGTATAATAACTCGTTAACCGGGGAGTTGCCTTCTGGGTTTTCGAATCTGACCTCCTTGCGACTGTTTGACGCGTCGATGAACGGTTTGACTGGGGCGATTCCGGATGAGTTGTGTCAGTTGCCGCTTGAGAGTCTCAATCTCTACGAGAACAAGTTCGAGGGGAAGTTACCGGAAAGCATTGCGAACTCGCCGGGTTTGTACGAACTCAGACTGTTCCGTAACCGGCTCACCGGCGAGTTACCGCGAAATCTTGGGAAGAACTCACCTTTGAGATGGATCGATATTTCTGACAACCAGTTCACCGGCGAAATCCCGGGGAATTTGTGTGAGAAGGGCGAGTTGGAGGAGCTTCTGATGATCAACAACCAGTTTTCCGGGGAGATTCCGGCGAGTTTAGGTGGGTGCGAGAGCTTAACAAGGGTGCGATTGGGTTACAATCGGTTTTCCGGGGAGGTTCCGGCGGGATTTTGGGGGCTCCCACATGTGTATCTGTTTGAGCTGGTGAGCAACTCGTTTTCCGGGGGTATTTCCGATGCCATTGCCACTGCGAAGAACCTTTCGATTTTCATTATCTCGAAGAACAACTTCACGGGCACGATTCCGGCGGAGCTGGGGCGGTTGGAGAATCTTGTGAAGTTTTTAGCGACTGATAACAAACTCAATGGATCATTACCAGGGAGTCTTGTGAATCTCAGGCAGCTTTCGAGTTTGGATCTTCGAAACAACGAACTCTCTGGGGAACTTTCCAGTGGAATCAAATCCTGGAAGAATCTCAACGAACTCAATTTAGCAAACAACGAATTTTCTGGCGAAATCCCTGAAGAAATCGGGGTTTTGCCCGTTCTTAATTACCTTGATCTGTCTGGAAATCTGTTTTCTGGGAACGTCCCAGTTGGGCTACAGAATTTGCATCTCAATCTGCTCAATCTATCGAACAATCATTTATCGGGCGAGCTTCCTCCGTTTTTAGCCAAAGGAAACTATGGAAATAGCTTTTTAGGGAATCCAGGTTTGTGTGGACATTTGGAAAGATTGTGCAACAGCGAAGACGAAGCTAAAAGCGAAGGCTATCTCTGGTTGCTGCGCTCCATCTTCTTCCTTGCCAGTGTCGTGTTAATCGTCGGCGTCGTCTGGTTTTACCTCAGATACAGGAAGTTCAAGATGGCAAAGAGAGAAATGGAGAAGGGTAAATGGACATTGATGTCCTTCCACAAGTTGGATTTCAGTGAATATGAGATCTTGGATTGTCTTGATGAAGACAACATCATAGGCAGTGGATCTTCTGGTAAAGTTTACAAGGTTGTGCTCAACAATGGCGAGGCTGTTGCAGTGAAGAAGCTGTTTGGAGGGATGAGGAAAGAAGGCGAGAAAGGCGATGTCGAGAAGGGCCAAGTACAAGACAATGGCTTTGAAGCCGAAATCGATACTCTGGGAAAGATTAGGCACAAGAACATTGTGAAATTGTGGTGCTGCTGTGTTACAAGAGACTACAAGCTTTTGGTCTATGAATATATGCCTAATGGCAGCTTGGGAGATTTGCTTCATAGTAGCAAAAAAGGACTGCTGGATTGGCCTACAAGGTTTAAGATAGCTCTGGATGCTGCCGAAGGGCTTTCTTATCTTCATCACGACTGCGTCCCTCCGATCGTACATCGAGATGTTAAGTCTAACAATATCTTGTTGGATGGCGATTTTGGAGCACGGTTGGCCGATTTCGGTGTAGCTAAGGTCATCGATTCAACTCCAAAGGGGCCTAAATCCATGTCGGTCATCGCAGGATCTTGCGGTTACATTGCTCCAGAGTATGCTTATACACTTCGAGTAAACGAGAAAAGCGACATATACAGTTTCGGTGTGGTGATCCTCGAGCTAATAACGGGGAGGCTCCCAATCGATCCAGAGTTTGGGGAGAAGGACTTGGTGAAATGGGTGTGTTTCACATTAGATCAAGACGGGATCGATCAGGTCATCGACCCGAAACTGGACAGTTGTTTCAAGGAAGAAATATGCAGAGTCCTCAACATTGGGCTGCTATGCACCAGCCCTCTGCCTATCAACCGGCCATCAATGAGAAAAGTGGTGAAAATGCTGCAAGAAGTTGGGGCAGAGAATCAATTCAAAACCAACAATAAAGATGGAAAGTTAACTCCTTACTATTACGAAGATGCCTCAGATCAGGGAAGTGTAGCATAG 2994 48.2 MLLPLFFFLSTFLSNPSLLSLSLSQEGLYLHTIKLSLDDPDSSLRSWNDRDDTPCSWFGVSCDPKTNSVHSLDLSNTNIAGPFPSLLCRLQNLSSLSLYNNSINMSLPSVISDCSSLQHLDLSQNLLTGELPSSISDLPNLRYLDLTGNNFSGDIPASFARFRKLEVLSLVYNLLDGPVPAFLGNITSLKMLNLSYNPFEPSRIPPEFGNLTNLEVLWLTQCNLVGEIPQSLGRLKRLTDLDLALNNLYGPIPKSLTELSSVVQIELYNNSLTGELPSGFSNLTSLRLFDASMNGLTGAIPDELCQLPLESLNLYENKFEGKLPESIANSPGLYELRLFRNRLTGELPRNLGKNSPLRWIDISDNQFTGEIPGNLCEKGELEELLMINNQFSGEIPASLGGCESLTRVRLGYNRFSGEVPAGFWGLPHVYLFELVSNSFSGGISDAIATAKNLSIFIISKNNFTGTIPAELGRLENLVKFLATDNKLNGSLPGSLVNLRQLSSLDLRNNELSGELSSGIKSWKNLNELNLANNEFSGEIPEEIGVLPVLNYLDLSGNLFSGNVPVGLQNLHLNLLNLSNNHLSGELPPFLAKGNYGNSFLGNPGLCGHLERLCNSEDEAKSEGYLWLLRSIFFLASVVLIVGVVWFYLRYRKFKMAKREMEKGKWTLMSFHKLDFSEYEILDCLDEDNIIGSGSSGKVYKVVLNNGEAVAVKKLFGGMRKEGEKGDVEKGQVQDNGFEAEIDTLGKIRHKNIVKLWCCCVTRDYKLLVYEYMPNGSLGDLLHSSKKGLLDWPTRFKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARLADFGVAKVIDSTPKGPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELITGRLPIDPEFGEKDLVKWVCFTLDQDGIDQVIDPKLDSCFKEEICRVLNIGLLCTSPLPINRPSMRKVVKMLQEVGAENQFKTNNKDGKLTPYYYEDASDQGSVA 997
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 75814122 75817594 + Tan0015952.1 Tan05g2466 753774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2466 997 ProSiteProfiles Protein kinase domain profile. 684 974 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2466 997 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Tan05g2466 997 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Gene3D Ribonuclease Inhibitor 178 260 IPR032675 -
Tan05g2466 997 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524(InterPro)
Tan05g2466 997 SMART LRR_sd22_2 235 261 - -
Tan05g2466 997 SMART LRR_sd22_2 114 140 - -
Tan05g2466 997 SMART LRR_sd22_2 498 527 - -
Tan05g2466 997 SMART LRR_sd22_2 90 107 - -
Tan05g2466 997 Gene3D Transferase(Phosphotransferase) domain 1 772 991 - -
Tan05g2466 997 SMART serkin_6 684 950 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2466 997 FunFam Receptor-like protein kinase HSL1 308 615 - -
Tan05g2466 997 FunFam Leucine-rich receptor-like protein kinase family protein 204 302 - -
Tan05g2466 997 Gene3D Phosphorylase Kinase; domain 1 649 771 - -
Tan05g2466 997 SUPERFAMILY RNI-like 266 591 - -
Tan05g2466 997 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 23 186 - -
Tan05g2466 997 SUPERFAMILY L domain-like 33 372 - -
Tan05g2466 997 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 967 IPR050647 -
Tan05g2466 997 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Tan05g2466 997 Gene3D Ribonuclease Inhibitor 261 330 IPR032675 -
Tan05g2466 997 FunFam Receptor-like protein kinase HSL1 668 771 - -
Tan05g2466 997 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 188 211 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 213 235 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 501 521 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 357 376 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 381 402 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 571 591 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 309 329 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 549 570 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 Pfam Leucine Rich Repeat 264 283 IPR001611 GO:0005515(InterPro)
Tan05g2466 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2466 997 Gene3D Ribonuclease Inhibitor 331 617 IPR032675 -
Tan05g2466 997 SMART LRR_typ_2 138 161 IPR003591 -
Tan05g2466 997 SMART LRR_typ_2 498 521 IPR003591 -
Tan05g2466 997 SMART LRR_typ_2 90 114 IPR003591 -
Tan05g2466 997 SMART LRR_typ_2 546 569 IPR003591 -
Tan05g2466 997 SMART LRR_typ_2 211 235 IPR003591 -
Tan05g2466 997 SMART LRR_typ_2 283 307 IPR003591 -
Tan05g2466 997 SMART LRR_typ_2 186 210 IPR003591 -
Tan05g2466 997 SUPERFAMILY Protein kinase-like (PK-like) 676 964 IPR011009 -
Tan05g2466 997 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 772 981 - -
Tan05g2466 997 Pfam Protein kinase domain 687 904 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1083 Tan-Chr2:18453850 Tan05g2466 Tan-Chr5:75814122 1.40E-83 dispersed
Tan02g2519 Tan-Chr2:93824280 Tan05g2466 Tan-Chr5:75814122 2.90E-75 dispersed
Tan03g1728 Tan-Chr3:73213135 Tan05g2466 Tan-Chr5:75814122 2.10E-87 dispersed
Tan03g2898 Tan-Chr3:82018236 Tan05g2466 Tan-Chr5:75814122 1.90E-85 dispersed
Tan05g2466 Tan-Chr5:75814122 Tan06g2327 Tan-Chr6:74635291 4.90E-81 dispersed
Tan01g0415 Tan-Chr1:3797135 Tan05g2466 Tan-Chr5:75814122 4.70E-90 transposed
Tan02g0401 Tan-Chr2:3423966 Tan05g2466 Tan-Chr5:75814122 7.20E-162 transposed
Tan07g1504 Tan-Chr7:66306093 Tan05g2466 Tan-Chr5:75814122 2.90E-18 transposed
Tan08g0454 Tan-Chr8:4363657 Tan05g2466 Tan-Chr5:75814122 3.00E-10 transposed
Tan11g0531 Tan-Chr11:4611291 Tan05g2466 Tan-Chr5:75814122 2.50E-45 wgd
Tan03g2516 Tan-Chr3:78512855 Tan05g2466 Tan-Chr5:75814122 5.20E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67662 PF00069 Pkinase 4.50E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2466 - - - 0.0