Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2507 ATGGAGAAAAAGGGTGCCATTTTAATGCAAAGGTACGAGCTTGGGAGGATGCTTGGACAGGGCACTTTTGCCAAAGTCTACCATGCTCGTAATCTCAAGTCAGGCCAGAGCGTGGCCATTAAGATCATTGACAAAGAGAAAGTGCTGCGTGTTGGGTTGATCGATCAAATCAAGAGGGAAATCTCTGTGATGCGCCTTGTGCGCCATCCCAATGTGGTGCAACTCTATGAGGTGATGGCTAGCAGGACCAAGATCTATTTTGCCATGGAGTATGTCAGAGGTGGGGAGCTTTTTAACAAAGTGGCTAAAGGGAAGCTCAAGGAAGATGCTGCTCGTAAGTACTTTCAGCAGCTCATTGGTGCTGTTGATTATTGCCATAGCCGTGGCGTGTACCATAGAGATATCAAGCCTGAAAATCTCCTTCTTGATGAGTTTGGGAATCTTAAGATTTCGGATTTTGGGTTGAGTGCTTTGGCTGAGTCGAGAAGGCAAGATGGGCTTCTTCATACCACTTGTGGAACCCCTGCTTATGTCGCCCCTGAAGTCATCAACAAGAAAGGTTATGATGGAGCTAAAGCTGATATTTGGTCTTCTGGGGTTGTCCTGTTTGTTCTTCTGGCTGGTTATCTCCCTTTCCACGATCCAAATCTGATGGAAATGTACAGAAAGATATCAAGAGGAGAATTCAAATGCCCCCAATGGTTTCCCCCAGAAGTTCGCAAGCTGCTCTCAAGAATCCTCGATCCATGTCCTCACACCAGAATAAACATGGCCAAACTCATGGAAAATTCTTGGTTCAAAAAGGGTTTCAAGGCAAATGTAGCAGCTCCAAAACCCCTTAAAATGAACGGCGACGTCTCTCCCGTGAACGAGGTCCACGCCGCTTTCGACGATACTAGTTCGGAGGGAAGCTCTGTTGTTAGTAACAGCAGCACTGAGAATGTAAGGCCACCCACCAGAAACAATTCCTTCAATGCATTTGACATCATATCCCTCTCACCAGGTTTCGATCTGTCGGGTCTGTTTGAGAGTGATGTGAACGAGAGGCCGCAGACGCGCTTCACGACGACGAAACCAGCATCGGCGATTGTGTCTAAGTTCGAAGAAATAGCAGAGATGGAGAGGTTCAAGGTGATGAAGAAAGATAATGGGATAGTGAAACTGCAGGGGAGTAAACAGGGGAGAAAAGGGCAGTTGGCTATAGATGCAGAGATATTTGAAGTGACACCTTCTTTTTTTGTGGTGGAGGTGAAGAAAACTGCTGGGGACACTTTGGAATACAGGCAATTTTACAACAAAGACATGAAGCCTTGTCTTAAGGACATTGTGTGGACTTGGGAAGGAAATGAACAACAACAACCACAGCAGCAACAGCAAACAAAACCACAAACTTTTTAG 1398 45.99 MEKKGAILMQRYELGRMLGQGTFAKVYHARNLKSGQSVAIKIIDKEKVLRVGLIDQIKREISVMRLVRHPNVVQLYEVMASRTKIYFAMEYVRGGELFNKVAKGKLKEDAARKYFQQLIGAVDYCHSRGVYHRDIKPENLLLDEFGNLKISDFGLSALAESRRQDGLLHTTCGTPAYVAPEVINKKGYDGAKADIWSSGVVLFVLLAGYLPFHDPNLMEMYRKISRGEFKCPQWFPPEVRKLLSRILDPCPHTRINMAKLMENSWFKKGFKANVAAPKPLKMNGDVSPVNEVHAAFDDTSSEGSSVVSNSSTENVRPPTRNNSFNAFDIISLSPGFDLSGLFESDVNERPQTRFTTTKPASAIVSKFEEIAEMERFKVMKKDNGIVKLQGSKQGRKGQLAIDAEIFEVTPSFFVVEVKKTAGDTLEYRQFYNKDMKPCLKDIVWTWEGNEQQQPQQQQQTKPQTF 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 76422353 76424555 + Tan0007084.1 Tan05g2507 753815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2507 465 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2507 465 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524(InterPro)
Tan05g2507 465 Gene3D Kinase associated domain 1, KA1 323 445 - -
Tan05g2507 465 FunFam Non-specific serine/threonine protein kinase 319 444 - -
Tan05g2507 465 SUPERFAMILY Protein kinase-like (PK-like) 8 325 IPR011009 -
Tan05g2507 465 Pfam NAF domain 322 380 IPR004041 GO:0007165(InterPro)
Tan05g2507 465 Gene3D Transferase(Phosphotransferase) domain 1 3 322 - -
Tan05g2507 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2507 465 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Tan05g2507 465 CDD CIPK_C 325 440 - -
Tan05g2507 465 FunFam Non-specific serine/threonine protein kinase 2 298 - -
Tan05g2507 465 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2507 465 SMART serkin_6 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2507 465 MobiDBLite consensus disorder prediction 300 319 - -
Tan05g2507 465 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 437 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan05g2507 465 CDD STKc_SnRK3 11 265 - -
Tan05g2507 465 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0536 Tan-Chr5:3750566 Tan05g2507 Tan-Chr5:76422353 5.40E-166 dispersed
Tan05g2507 Tan-Chr5:76422353 Tan09g1553 Tan-Chr9:67372585 1.50E-152 dispersed
Tan05g0262 Tan-Chr5:1983535 Tan05g2507 Tan-Chr5:76422353 1.00E-31 transposed
Tan03g2584 Tan-Chr3:78982431 Tan05g2507 Tan-Chr5:76422353 3.70E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67664 PF00069 Pkinase 2.30E-72 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2507 K07198 - csv:101206082 806.594