Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2522 | ATGAATAACCACCAATTCTATTCCGGTGATCCACTAGAAGATAGTGACGAAAAAGCCCCTGATTCTCCTCCTCCTAATTCCGCCGCCGCCGCCGGCAAGAAGGGCAGAAGAGGGATGAAGAAGAAAGTGGTGTCGGTGAGAATTAATGGTGACAGCCCAAGGAATTCTTCTGGTTCTACCACTCCTCCTTCTGATTCTTGGGCTTGGAGAAAGTACGGTCAAAAGCCCATCAAAGGCTCCCCTTATCCAAGGGCGTATTATAGGTGTAGTAGTTCAAAGGGATGTCCGGCGAGGAAGCAAGTAGAGAGGAATCGGCTTGATCCAACGATGTTGGTTATTACATATTCGTGCGAGCATAATCATTCCGGTCCGGTTTCTAGAAACAGCAATAACCACCAGCAAGCCGCCGTGGAGAAACCCGGTTCGCCGGAGACTGTGCCGGTTCAGCCAGAACCGGAAGTGGAAGAGAAATTTGTGGACATGGGAGACGAGTCGTTGATAACCGGGGACGAGTTCAGTTGGTTCGGGGAAATGGAAACGACGTCGTCGACTGTGCTCGAGAGCTCGATTTTCTCGGGGAGGTCCACTCGATTGGGAGATTCGATTTCCAGTGACGTGGCAATGCTTTTTCCCATGGGGGATGATGACGTGGACGAGTCGCTTTTCGCGGATCTCGGGGAGTTGCCGGAGTGCTCGGTGGTTTTCCGGCGCGGCGGTTCCCGAGGATTGGCGGTGGATGAACAACCGGCTGCAGGGCAGCGGCGGATCACTCCTTGGTGCGGCACCACCACATGA | 795 | 53.58 | MNNHQFYSGDPLEDSDEKAPDSPPPNSAAAAGKKGRRGMKKKVVSVRINGDSPRNSSGSTTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSSKGCPARKQVERNRLDPTMLVITYSCEHNHSGPVSRNSNNHQQAAVEKPGSPETVPVQPEPEVEEKFVDMGDESLITGDEFSWFGEMETTSSTVLESSIFSGRSTRLGDSISSDVAMLFPMGDDDVDESLFADLGELPECSVVFRRGGSRGLAVDEQPAAGQRRITPWCGTTT | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 76564847 | 76566210 | + | Tan0016182.1 | Tan05g2522 | 753830 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2522 | 264 | Pfam | WRKY DNA -binding domain | 65 | 121 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g2522 | 264 | SMART | WRKY_cls | 63 | 123 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g2522 | 264 | MobiDBLite | consensus disorder prediction | 122 | 138 | - | - | |
Tan05g2522 | 264 | SUPERFAMILY | WRKY DNA-binding domain | 60 | 123 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g2522 | 264 | MobiDBLite | consensus disorder prediction | 49 | 67 | - | - | |
Tan05g2522 | 264 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 18 | 232 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER) | |
Tan05g2522 | 264 | Gene3D | WRKY domain | 51 | 125 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g2522 | 264 | MobiDBLite | consensus disorder prediction | 122 | 150 | - | - | |
Tan05g2522 | 264 | FunFam | WRKY transcription factor 65 | 47 | 124 | - | - | |
Tan05g2522 | 264 | ProSiteProfiles | WRKY domain profile. | 64 | 124 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan05g2522 | 264 | MobiDBLite | consensus disorder prediction | 1 | 83 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2522 | Tan-Chr5:76564847 | Tan05g2751 | Tan-Chr5:79553658 | 1.00E-30 | dispersed | |
Tan02g0189 | Tan-Chr2:1645551 | Tan05g2522 | Tan-Chr5:76564847 | 1.10E-41 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27593 | PF03106 | WRKY | 5.40E-25 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2522 | - | - | - | 0.0 |