Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2533 ATGACATCGGGGACCAGAATGCCGACTTGGAAGGAGAGGGAGAACAACAAGCGCCGTGAGAGGCGCCGCCGTGCCATTGCCGCTAAGATCTTCCTCGGCTTGCGAATGTACGGAAACTACAAGCTCCCCAAGCACTGCGACAATAATGAGGTCCTCAAAGCCCTCTGCAATGAAGCTGGATGGACTGTCGAAGAAGATGGCACTACCTACCGGAAGGGATGCAAGCCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCAAGTCCATGTTCATCTTACCAGCCGAGCCCATGTGCGTCCTATAACCCAAGTCCTGCGTCTTCTTCCTTCCCAAGCCCCACCTCTTCCCGTTACGCCATTAAAGGCAATAACAATGCTCCTGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTCTCCTCAAGTTCATCATCAGCTTCCTCCAGGCTGCCTCACCATAATCTTTACATTACCGGTGGCTCCATAAGTGCACCCGTCACCCCTCCATCGAGCTCCCCAACCGCTCGAACACCCAGGAAACCAAATGATTGGGACAATCATCCAGCAGCTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGCTTGCCTGCATCAACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATTCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCACGCTTGTGGCAAGGAATCCGTTTGGATTCAAGGAGGCAATGTCTGCTGGAGGGTCTCGTAATTGGACCCCTGCACAGAGTGGGACGTGCTCGCCCACGGTCGCTGCAGGCACTGATCTTACTTCAGATGTTCCGATGACAGATGGAGCCGTGGCAGAGTTTGCCTTTGGAAGTTGTTCGATTGGGTTGGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTTGAACTGACACTTGGGAATTCAAGAACAAGGTGA 987 53.29 MTSGTRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPCASYNPSPASSSFPSPTSSRYAIKGNNNAPDPNSLIPWLKNLSSSSSSASSRLPHHNLYITGGSISAPVTPPSSSPTARTPRKPNDWDNHPAAAPAWAAQRFSCLPASTPPSPGRQVLADSAWLDSMRIPQSGPSSPTFTLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVAAGTDLTSDVPMTDGAVAEFAFGSCSIGLVKPWEGERIHEECISDDLELTLGNSRTR 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 76686586 76689969 + Tan0015360.1 Tan05g2533 753841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2533 328 MobiDBLite consensus disorder prediction 1 21 - -
Tan05g2533 328 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 328 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Tan05g2533 328 MobiDBLite consensus disorder prediction 102 125 - -
Tan05g2533 328 MobiDBLite consensus disorder prediction 160 189 - -
Tan05g2533 328 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 141 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0910 Tan-Chr1:8663365 Tan05g2533 Tan-Chr5:76686586 1.20E-121 dispersed
Tan03g1950 Tan-Chr3:74643878 Tan05g2533 Tan-Chr5:76686586 1.50E-52 dispersed
Tan05g2533 Tan-Chr5:76686586 Tan05g2534 Tan-Chr5:76688500 2.50E-127 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27596 PF05687 BES1_N 4.90E-67 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2533 - - - 0.0