Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2533 | ATGACATCGGGGACCAGAATGCCGACTTGGAAGGAGAGGGAGAACAACAAGCGCCGTGAGAGGCGCCGCCGTGCCATTGCCGCTAAGATCTTCCTCGGCTTGCGAATGTACGGAAACTACAAGCTCCCCAAGCACTGCGACAATAATGAGGTCCTCAAAGCCCTCTGCAATGAAGCTGGATGGACTGTCGAAGAAGATGGCACTACCTACCGGAAGGGATGCAAGCCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCAAGTCCATGTTCATCTTACCAGCCGAGCCCATGTGCGTCCTATAACCCAAGTCCTGCGTCTTCTTCCTTCCCAAGCCCCACCTCTTCCCGTTACGCCATTAAAGGCAATAACAATGCTCCTGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTCTCCTCAAGTTCATCATCAGCTTCCTCCAGGCTGCCTCACCATAATCTTTACATTACCGGTGGCTCCATAAGTGCACCCGTCACCCCTCCATCGAGCTCCCCAACCGCTCGAACACCCAGGAAACCAAATGATTGGGACAATCATCCAGCAGCTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGCTTGCCTGCATCAACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATTCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCACGCTTGTGGCAAGGAATCCGTTTGGATTCAAGGAGGCAATGTCTGCTGGAGGGTCTCGTAATTGGACCCCTGCACAGAGTGGGACGTGCTCGCCCACGGTCGCTGCAGGCACTGATCTTACTTCAGATGTTCCGATGACAGATGGAGCCGTGGCAGAGTTTGCCTTTGGAAGTTGTTCGATTGGGTTGGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTTGAACTGACACTTGGGAATTCAAGAACAAGGTGA | 987 | 53.29 | MTSGTRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPCASYNPSPASSSFPSPTSSRYAIKGNNNAPDPNSLIPWLKNLSSSSSSASSRLPHHNLYITGGSISAPVTPPSSSPTARTPRKPNDWDNHPAAAPAWAAQRFSCLPASTPPSPGRQVLADSAWLDSMRIPQSGPSSPTFTLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVAAGTDLTSDVPMTDGAVAEFAFGSCSIGLVKPWEGERIHEECISDDLELTLGNSRTR | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 76686586 | 76689969 | + | Tan0015360.1 | Tan05g2533 | 753841 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2533 | 328 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Tan05g2533 | 328 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 328 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Tan05g2533 | 328 | MobiDBLite | consensus disorder prediction | 102 | 125 | - | - | |
Tan05g2533 | 328 | MobiDBLite | consensus disorder prediction | 160 | 189 | - | - | |
Tan05g2533 | 328 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 141 | IPR008540 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0910 | Tan-Chr1:8663365 | Tan05g2533 | Tan-Chr5:76686586 | 1.20E-121 | dispersed | |
Tan03g1950 | Tan-Chr3:74643878 | Tan05g2533 | Tan-Chr5:76686586 | 1.50E-52 | dispersed | |
Tan05g2533 | Tan-Chr5:76686586 | Tan05g2534 | Tan-Chr5:76688500 | 2.50E-127 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27596 | PF05687 | BES1_N | 4.90E-67 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2533 | - | - | - | 0.0 |