Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2553 ATGGTAGTCGAAGAGACGATCAAAGCTTCATCGACGGAAGATCTTTCCAATTCCATCGCAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGCGACGATGACCTCGACTCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACTTTCTGGTTCGATAATCCCTCTGCCAAATCCAAACAAGCCACTTGGGGTGCGTCTATCCGACCGATCTATACCTTCTCGACTGTCGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCAATGAGGGCAGATTTGTACTGCTTTAAACATAAAATTGAGCCTAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGTGAACAGTTTGATTGCGGTGATGAAATTTGTGGAGCAGTTGTTAATGTTAGATCTGGCCAGGATAAAATATCGATTTGGACAAAGAATGCTTCCAATGAAGCTGCACAGGCGAGCATTGGGAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCACGACGATGCGAAGAAATTCGACAGACATGCGAAGAACCGATATTTGGCATGA 708 46.19 MVVEETIKASSTEDLSNSIANQNPRGRGAEEDEELEEGEIVGDDDLDSSNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYLA 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 76913600 76916648 - Tan0015076.1 Tan05g2553 753861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2553 235 MobiDBLite consensus disorder prediction 1 37 - -
Tan05g2553 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 27 227 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Tan05g2553 235 FunFam Eukaryotic translation initiation factor 4E 51 235 - -
Tan05g2553 235 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Tan05g2553 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Tan05g2553 235 SUPERFAMILY eIF4e-like 56 231 IPR023398 -
Tan05g2553 235 MobiDBLite consensus disorder prediction 9 24 - -
Tan05g2553 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2553 Tan-Chr5:76913600 Tan06g2373 Tan-Chr6:75802675 1.20E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2553 K03259 - csv:101206312 457.988