Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g2553 | ATGGTAGTCGAAGAGACGATCAAAGCTTCATCGACGGAAGATCTTTCCAATTCCATCGCAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGCGACGATGACCTCGACTCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACTTTCTGGTTCGATAATCCCTCTGCCAAATCCAAACAAGCCACTTGGGGTGCGTCTATCCGACCGATCTATACCTTCTCGACTGTCGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCAATGAGGGCAGATTTGTACTGCTTTAAACATAAAATTGAGCCTAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGTGAACAGTTTGATTGCGGTGATGAAATTTGTGGAGCAGTTGTTAATGTTAGATCTGGCCAGGATAAAATATCGATTTGGACAAAGAATGCTTCCAATGAAGCTGCACAGGCGAGCATTGGGAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCACGACGATGCGAAGAAATTCGACAGACATGCGAAGAACCGATATTTGGCATGA | 708 | 46.19 | MVVEETIKASSTEDLSNSIANQNPRGRGAEEDEELEEGEIVGDDDLDSSNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYLA | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 76913600 | 76916648 | - | Tan0015076.1 | Tan05g2553 | 753861 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g2553 | 235 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Tan05g2553 | 235 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 27 | 227 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Tan05g2553 | 235 | FunFam | Eukaryotic translation initiation factor 4E | 51 | 235 | - | - | |
Tan05g2553 | 235 | Pfam | Eukaryotic initiation factor 4E | 61 | 213 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Tan05g2553 | 235 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 116 | 139 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Tan05g2553 | 235 | SUPERFAMILY | eIF4e-like | 56 | 231 | IPR023398 | - | |
Tan05g2553 | 235 | MobiDBLite | consensus disorder prediction | 9 | 24 | - | - | |
Tan05g2553 | 235 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 51 | 235 | IPR023398 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2553 | Tan-Chr5:76913600 | Tan06g2373 | Tan-Chr6:75802675 | 1.20E-59 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g2553 | K03259 | - | csv:101206312 | 457.988 |