Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2590 ATGGGATGTTCTTCTTGTACGAAGCACTTCTTCAAGCGCTTTTTCACCGACGAGTTCCAAATGAATGGCGCTCTTCAAAGCACTTTTTTGTCTCCTGATCTCTTGCCTTCCCTTGGTGCTTCTATCAACCTCACCACCAAGCTTCCTAAACACATCATTTCCCCTTTCAACCCACGTTATCGAGCATGGGAGATGTGGCTGGTAATTCTAGTGATATACTCAGCTTGGATTTGTCCATTCGAATTTGCATTTCTTCCTTACAAGCAAAATGCTCTTTTCATCATCGACCACATCGTCAACGCCTTCTTTGCCGTTGATATCGTTTTAACTTTCTTCCTCGCATATCTCGATACCCAATCCCATCTCCTCGTCGACGACCCCAAAAAAATTGCTCTCAGGTATTTGTCTACTTGGTTTATTTTCGACGTTTGTTCGACTGCGCCATTACAGTCGATCAGTTTCTTGTTCACGAATCGAACTGGGGAAGTTGGATTCAAGCTTCTGAACATGCTCCGGCTATGGCGGCTCCGACGGGTCAGCTCTCTCTTTGCAAGGCTGGAAAAGGACATTAGGTTCAATTATTTCTGGACCCGTTGCACAAAGCTCGTTTCTGTTACATTATTTGCAGTACATTGTGCTGGGTGCTTTAATTTCGTAATAGCAGACAAATATCCAGACTCAAAACGAACATGGATTGGTGCAGTGAACCCAAATTTCAAGGAAGATAGTCTCTGGAACCTTTATGTTACTGCAATTTACTGGTCCATTACCACCTTAACAACCACTGGCTATGGCGATCTCCATGCTGAGAACCCTAGAGAAATGCTGTTTGATATCTTTTACATGCTCTTCAACTTGGGTTTGACCTCTTATCTCATTGGCAACATGACCAATCTCGTCGTCCATTGGACGAGTCGTACCCGAAACTTCAGGGATTCAGTGCAAGCTGCGACGGAATTTGCATTGAGAAACCAATTACCTAATCGAATACAAGACCAAATGTTGTCGCACATATGTCTCAAGTTCAGAACGGAGGGACTGAAGCAGCAAGACACATTGAACGATCTTCCAAAAGCCATTAGAGCCTCCATTGCTCATTATCTCTTCTATCCTATTGTTCAAAAAGCCTACCTTTTTGAAGGAGTTTCTCACGACTTTCTTTTCCAATTGGTGTCAGATGTGGAGGCTGAGTATTTCCCACCTAAGGAAGATGTTATACTCCAAAATGAGGCTCAAACAGATCTCTATATATTGGTCTCAGGCAGTGTGGATCTAATAATATCCAATATTGATGACCATGATCAAGTTATTGGACGAGCAACAACTGGAGACATGTTTGGAGAATTTGGAGTGTTATGTCAAAAGCCACAACCTTTCACAATTCGAACCTCAAAGCTTTCTCAAATATTGAGGCTTAAGAGAACTTCTTTGTTGTATATTATTGAATCAAATTCAGAAGATGGGAGTATTATAATGAACAACTTTTTCATGAAAATGAAGGAATATGAAAGAATGGGCAATAATATTTGGAGTGATGATGGGGTAAAGAAACTTGAAATTCAATCTAAAGAAGATGAAATGGGAAAGCAAATTAGAAACGAAAATGTGGGAAGTTTAGATGAACATCGAATTGAGTTTGATGAGCTTGAAGGAGCTGAAAATGACATTTTTTCTCATAACAAACATGGAAGAAATGGAACAAGCTCTTATTTGAATGTCTCTAAACAAATCAAGAAAAGGGTTGCCGTATATTTGCAGCCTCGAGATGGAAGTGGGGTTAAGAGTGAATACGGGAAGTTAATGCTTCTCCCCGATTCGATAGAAGAGCTCTGCAGAATTGCAGGTGAAAAGTTTGGAGGGGAAATTCCTACAAAAGTGATGAGTGCAGATAATGCAGAAATTGATGATATAAGTGTGATTCGTGATGGTGACCATTTATTTCTTCTTTATAATGATATACAAAAATGTGGTCTCCAATGA 1980 40.4 MGCSSCTKHFFKRFFTDEFQMNGALQSTFLSPDLLPSLGASINLTTKLPKHIISPFNPRYRAWEMWLVILVIYSAWICPFEFAFLPYKQNALFIIDHIVNAFFAVDIVLTFFLAYLDTQSHLLVDDPKKIALRYLSTWFIFDVCSTAPLQSISFLFTNRTGEVGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLVSVTLFAVHCAGCFNFVIADKYPDSKRTWIGAVNPNFKEDSLWNLYVTAIYWSITTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYLIGNMTNLVVHWTSRTRNFRDSVQAATEFALRNQLPNRIQDQMLSHICLKFRTEGLKQQDTLNDLPKAIRASIAHYLFYPIVQKAYLFEGVSHDFLFQLVSDVEAEYFPPKEDVILQNEAQTDLYILVSGSVDLIISNIDDHDQVIGRATTGDMFGEFGVLCQKPQPFTIRTSKLSQILRLKRTSLLYIIESNSEDGSIIMNNFFMKMKEYERMGNNIWSDDGVKKLEIQSKEDEMGKQIRNENVGSLDEHRIEFDELEGAENDIFSHNKHGRNGTSSYLNVSKQIKKRVAVYLQPRDGSGVKSEYGKLMLLPDSIEELCRIAGEKFGGEIPTKVMSADNAEIDDISVIRDGDHLFLLYNDIQKCGLQ 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 77227450 77235223 + Tan0021131.1 Tan05g2590 753898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2590 659 ProSiteProfiles cAMP/cGMP binding motif profile. 378 498 IPR000595 -
Tan05g2590 659 SUPERFAMILY Voltage-gated potassium channels 55 301 - -
Tan05g2590 659 FunFam Potassium channel KAT3 62 302 - -
Tan05g2590 659 CDD CAP_ED 378 492 IPR000595 -
Tan05g2590 659 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan05g2590 659 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan05g2590 659 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan05g2590 659 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan05g2590 659 PRINTS EAG/ELK/ERG potassium channel family signature 73 80 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan05g2590 659 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan05g2590 659 Pfam Cyclic nucleotide-binding domain 397 484 IPR000595 -
Tan05g2590 659 Gene3D Jelly Rolls 346 512 IPR014710 -
Tan05g2590 659 PANTHER POTASSIUM CHANNEL AKT1 18 516 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Tan05g2590 659 Pfam Ion transport protein 60 307 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan05g2590 659 FunFam Potassium channel KAT2 366 503 - -
Tan05g2590 659 Gene3D - 61 301 - -
Tan05g2590 659 SUPERFAMILY cAMP-binding domain-like 305 495 IPR018490 -
Tan05g2590 659 Pfam KHA, dimerisation domain of potassium ion channel 579 648 IPR021789 -
Tan05g2590 659 ProSiteProfiles KHA domain profile. 580 659 IPR021789 -
Tan05g2590 659 SMART cnmp_10 378 496 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0771 Tan-Chr1:7356834 Tan05g2590 Tan-Chr5:77227450 3.40E-144 dispersed
Tan01g0772 Tan-Chr1:7356834 Tan05g2590 Tan-Chr5:77227450 1.40E-118 dispersed
Tan01g3670 Tan-Chr1:101564582 Tan05g2590 Tan-Chr5:77227450 4.90E-08 dispersed
Tan01g3696 Tan-Chr1:101780042 Tan05g2590 Tan-Chr5:77227450 1.20E-141 dispersed
Tan05g2590 Tan-Chr5:77227450 Tan11g1376 Tan-Chr11:12056734 4.10E-76 dispersed
Tan05g2590 Tan-Chr5:77227450 Tan09g1393 Tan-Chr9:66065097 2.00E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2590 K21867 - csv:101215858 1105.51