Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2687 ATGTTAGAAGAGCTCGCCCGAGGATTAGACGGGGAGCTAGGTTACGAAGCAGCGGTTAATTCGAATTCGAGTCAAAATTCTATGAGCAGTGAAAGTTGCAGCAGCTTCAGTCGCCTCTCGTTCGATGCCGCGATTGATTTTCCTACCTCTCGATCCTCGCCGGAGAGTCTCGATTTGAAGCCTCACCGATCGTCTGATTTCGCTTACTCCGCCATTCGTCGCCGGAAATCCAAGCTTACTTTCCGTGATTTTCGCCTACTCCGCCGTATCGGCGCTGGCGACATTGGCACGGTCTATCTTTGTCAGTTGCGGAACTTGACCGACGGTTGCTATGATGACGAAGACGACGATCCGTGTTTGTACGCGATGAAAGTGGTGGATAAGGAGGCGTTGGAATTGAAGAAGAAGGTGCAGAGGGCGGAAATGGAGAGGAAAATATTGAAGATGCTGGACCATCCATTTTTGCCTACTCTTTACGCTGAGTTTGAGGCCTCTCATTTCTCTTGCATCGTTATGGAGTTCTGTTCCGGCGGCGACTTGCATTCTCTCCGCCATAAACAGCCGCGTAAACGCTTCTCCCTCAGCTCCGCAAGGTTTTATGCTGCTGAAGTTCTCGTTGCTTTAGAGTACCTTCATATGCTTGGAATCATCTACAGAGACCTTAAGCCGGAGAACGTCCTCGTCCGATCAGACGGTCACATCATGCTATCGGATTTCGATCTATCTCTCTGTTCCGACGCCACCCCCGCCGTTGAATCGCCGGATTCCTCCCCCAATCCGGCGTTCCCCGACGCGACGGCGTACCCCAGAACCAACACTGCCGCCACTACAACCCCGTTTTCCTGCCTCTACAACCGGCTTTTCCGGTCACGGAAGGTCCAAACCTTGACACCCAACTGGCTCTTCGTCGCCGAACCCGTCTCGGCACGGTCCTGCTCCTTCGTTGGAACCCACGAGTACGTCTCGCCGGAAGTTGCTGCCGGCGGGTCCCACGGCAACGCCGTCGACTGGTGGGCATTTGGAGTGTTTCTCTACGAGCTGATCTACGGCCGGACGCCGTTCGCGGCCTCATCCAATGAGACGACGCTAAGGAACATTATAAAGAAGCCGTTGACGTTTCCGACCGCCGCGTCCTCCGGCGCGCTTGAGCATCACGCGCGTGACCTCATTTCCGGTTTGCTTAACAAGGACCCGACCCGAAGACTCGGGTCGAAACGCGGGTCCGCCGACATCAAGAAGCATCCGTTCTTCAAGGGCCTCAACTTCGCCCTCATACGGTCGCTCACTCCGCCTGAGGTTCCCGGCGTACGACGGCGGAAACCGACGCCGGTGCCGGTGTGCAAACCCAAGGACAAGGCGCCTCATTCGGCCGGGTTCGATTACTTCTAA 1389 55.58 MLEELARGLDGELGYEAAVNSNSSQNSMSSESCSSFSRLSFDAAIDFPTSRSSPESLDLKPHRSSDFAYSAIRRRKSKLTFRDFRLLRRIGAGDIGTVYLCQLRNLTDGCYDDEDDDPCLYAMKVVDKEALELKKKVQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPRKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPDSSPNPAFPDATAYPRTNTAATTTPFSCLYNRLFRSRKVQTLTPNWLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWAFGVFLYELIYGRTPFAASSNETTLRNIIKKPLTFPTAASSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEVPGVRRRKPTPVPVCKPKDKAPHSAGFDYF 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 78551388 78554053 - Tan0006784.1 Tan05g2687 753995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2687 462 ProSiteProfiles Protein kinase domain profile. 84 417 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2687 462 Pfam Protein kinase domain 311 417 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2687 462 Pfam Protein kinase domain 85 244 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2687 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g2687 462 MobiDBLite consensus disorder prediction 433 462 - -
Tan05g2687 462 SMART serkin_6 84 417 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2687 462 Gene3D Transferase(Phosphotransferase) domain 1 175 242 - -
Tan05g2687 462 FunFam protein kinase PINOID 175 243 - -
Tan05g2687 462 Gene3D Phosphorylase Kinase; domain 1 82 174 - -
Tan05g2687 462 Gene3D Transferase(Phosphotransferase) domain 1 310 435 - -
Tan05g2687 462 FunFam protein kinase PINOID 2 82 174 - -
Tan05g2687 462 CDD STKc_phototropin_like 82 441 - -
Tan05g2687 462 Coils Coil 123 150 - -
Tan05g2687 462 FunFam serine/threonine-protein kinase D6PK-like 309 435 - -
Tan05g2687 462 SUPERFAMILY Protein kinase-like (PK-like) 63 435 IPR011009 -
Tan05g2687 462 PANTHER FLIPPASE KINASE 1-RELATED 30 436 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0953 Tan-Chr1:9231667 Tan05g2687 Tan-Chr5:78551388 2.20E-92 dispersed
Tan05g2687 Tan-Chr5:78551388 Tan08g0220 Tan-Chr8:1979177 4.60E-106 dispersed
Tan05g2687 Tan-Chr5:78551388 Tan05g1838 Tan-Chr5:62340206 2.30E-102 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67671 PF00069 Pkinase 5.90E-32 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2687 - - - 0.0