Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2693 ATGTATCGGCAAACAATTTCCGCTCTTTTCTTGACGCCGATAGCCTATTTTTGGGAAAGAAAAACCAGACCTCAGCTTACAGCTTACATCTTATTCCTCCTTTTCATCAGTTCCTTACTTGGGTTAACACTAACATTATACCTATTTCTAATTGGTCTGCACTACACATCTGCAACTTTCTCTTGTGCATTTCTCAACCTGGTGCCTGTAAATACGTTTATTCTAGCCGTATTATTCCGTATGGAGAAAGTTGACATGAAAAGCAAGGGTGGAAGAGCCAAAGTTCTTGGGACTCTGGTGTGCATTTCAGGAAACTTAATTTTGATTCTGTACAAAGGAATGCCGCTAACCAGCCCCGGATCAGCAACCGGAAAAACAAATGGAGTTCGTGCAATGGTTCAAGCTGAAACACCAGGAAGATGGTTAATAGGTTCATTGGTTTTGACTGCAGGCTGCTTTATGTGGTCCTCTTGGTTCCTTATGCAATCAAGGGTTGGCAAGGTTTATCCATGTCAATATTCTAGTACCTGCATCATGTCCTTCTTCAGCGCCATCCAATCGGCTGTTTTACACTTGATTATAGACAGGAAGAACTCAGTGTTCGTTGTGAAAGGGAAGTTTGCTATCTTAAGTCTCATATATGCTGGATCAGTGGGTTCAGGGTTGTGCTATGTGGGGATGTCTTGGTGCGTAAAACAGAAAGGGCCAGTTTTCACAGCTGCTTTTACACCTTTCATGGAGATTTTTGCAGCCATATTTGATTTCTTCATCTTGCATGAACAGATTCACCTAGGAAGTGTTGTGGGATCAGTTTTGATCATAAGTGGAATGTACATTCTTCTATGGGGTAAAGATAGAGAAGCAAAGGACAAGGAGTATGCATTGAAGCAGACTGTATCAGTTGAAGAAGCCCCTCATTTGATAACCATTTTTTTTTTAAATTATGCTTGTTTTTCACAATTTCTCTTCATCTGCAGCTGCAACTGCAACCACATGAAGCAAGAAGAAGTCAATCACTGCCAAATTCAAGAATGGTATCCCAAATTCAAATCCTTCTCTATCAAAACCCTAATTCACGAGCTTCCAGAATCTTTCGTTCATTACCTTCTCGACGACTCCGGACCTTTCCTCCTTCCACTTTCCATCTCAAACGAGGACGCTCTTCCCAATAGAATCGTCAATCCCCATGAACAAGACGATTACCAGTTGAAAGAAGGATCCGATGATGAATCGGAGCAATCCACTGCACCTCCTTCGTTTCCGGAGCTTGAATCTGATGTTAAACAGTCGATTTGCTCTCTCGGAGGTTCCGTCTTCCCGAAGTTGAACTGGAGCGCACCGAAAGACTCTGCCTGGATTAGCCCTACCGGGACTTTAAAGTGCTCTTCGTTCAGTGAGATTGCGCTCTTGCTTCGATCTTCCGATTCGCTTGTTCACGATCTCTGTCACGCGTACGATTCCTGCACCGATAAATCGTCGTCGAGGCCATCGAGATTCTTCCTCGCGCTTCGTAAGTGGTACCCGTCCCTTCGGCCAGAGATGGAGTTTCGTTGCTTCGTAAGGAATCGGAACCTGGTTGGCATTTCCCAGCGCGAGGTCACAACGTTCTATCCTGCGTTAGTGGAGAAGAAGGAGAATCTGCAAGAGGTCATCGGAGAATTCTTCATCGACCATGTGAAGCCAAGCTTCGAATCGGAGAATTACACGTTGGATGTGTATGTGACGAAGAACGAAGCTGTTAAGATACTGGATTTCAATCCATGGGGAGCATTCACACTTGCATTGCTGTTCGATTGGGAGGAATTGGAGGAGAAGAACGAAGATATTGAATTGAGAATCGTGGAGAGTCGGAGGGCGGTGAGGCCTGGATTGAAGACTGCGGTTCCATTCGATTACTTGGATACGAGCCCTGGAAGTGGTTGGGACCAGTTTTTGAGAAATGCAGATCAAGAATTGCAGCAGCAAACCAGAGACGATGACGGATTGAATCCCTAA 1995 44.56 MYRQTISALFLTPIAYFWERKTRPQLTAYILFLLFISSLLGLTLTLYLFLIGLHYTSATFSCAFLNLVPVNTFILAVLFRMEKVDMKSKGGRAKVLGTLVCISGNLILILYKGMPLTSPGSATGKTNGVRAMVQAETPGRWLIGSLVLTAGCFMWSSWFLMQSRVGKVYPCQYSSTCIMSFFSAIQSAVLHLIIDRKNSVFVVKGKFAILSLIYAGSVGSGLCYVGMSWCVKQKGPVFTAAFTPFMEIFAAIFDFFILHEQIHLGSVVGSVLIISGMYILLWGKDREAKDKEYALKQTVSVEEAPHLITIFFLNYACFSQFLFICSCNCNHMKQEEVNHCQIQEWYPKFKSFSIKTLIHELPESFVHYLLDDSGPFLLPLSISNEDALPNRIVNPHEQDDYQLKEGSDDESEQSTAPPSFPELESDVKQSICSLGGSVFPKLNWSAPKDSAWISPTGTLKCSSFSEIALLLRSSDSLVHDLCHAYDSCTDKSSSRPSRFFLALRKWYPSLRPEMEFRCFVRNRNLVGISQREVTTFYPALVEKKENLQEVIGEFFIDHVKPSFESENYTLDVYVTKNEAVKILDFNPWGAFTLALLFDWEELEEKNEDIELRIVESRRAVRPGLKTAVPFDYLDTSPGSGWDQFLRNADQELQQQTRDDDGLNP 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 78649766 78657967 - Tan0018058.1 Tan05g2693 754001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2693 664 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 112 - -
Tan05g2693 664 Coils Coil 599 619 - -
Tan05g2693 664 SUPERFAMILY Multidrug resistance efflux transporter EmrE 206 286 - -
Tan05g2693 664 MobiDBLite consensus disorder prediction 401 423 - -
Tan05g2693 664 Pfam EamA-like transporter family 143 281 IPR000620 GO:0016020(InterPro)
Tan05g2693 664 Pfam EamA-like transporter family 2 91 IPR000620 GO:0016020(InterPro)
Tan05g2693 664 PANTHER D123 PROTEIN 332 657 IPR009772 GO:0005737(PANTHER)
Tan05g2693 664 Pfam D123 345 635 IPR009772 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2693 Tan-Chr5:78649766 Tan07g0144 Tan-Chr7:3874361 1.50E-81 dispersed
Tan05g2693 Tan-Chr5:78649766 Tan08g0693 Tan-Chr8:6872296 2.00E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2693 - - - 0.0