Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2703 ATGGCTCTTGCCATGCATAGAGATTCCTCGAATAAGCAGATGGATACAAGCAAGTATGTGAGATATACGCCTGAGCAAGTTGATGCATTAGAGAGGGTTTATGCTGAATGCCCAAAGCCCAGTTCGTTGAGAAGGCAACAGCTCATTCGGGAGTGCCCCATTCTCTCTAATATTGAGCCTAAGCAGATCAAAGTTTGGTTCCAAAATCGCAGATGTCGGGAAAAGCAAAGGAAGGAAGCTTCTCGTCTTCAAACAGTTAATAGGAAGCTGACTGCGATGAACAAGTTGTTGATGGAAGAGAATGACCGTTTGCAGAAGCAGGTCTCTCGTTTGGTTTACGAGAATGGATACATGAGACAGCAGTTGCATACTGCATCTGGAACAACCACGGACAATAGCTGTGAGTCCGTGGTCATGAGTGGTCAACACCATCAACAGCAAAACCCAACTAAGCATACCCAAAAGGATGCTAATAACCCAGCTGGTCTTCTTGCAATAGCCGAAGAGACCTTGGCAGAGTTCCTTTCTAAGGCAACAGGAACTGCTGTCGACTGGGTTCAAATGATTGGGATGAAGCCTGGTCCGGATTCAATTGGGATTGTTGCTGTTTCCCGCAACTGCAATGGGGTAGCAGCACGAGCCTGTGGTTTAGTGAGTCTTGAGCCAACAAAGGTGGCCGAAATTCTCAAAGATCGTCTGTCATGGTTTCGTGACTGCCGTTGTGTTGATATATTAAGTGTAATCTCTACAGGAAATGGGGGGACTATAGAACTCTTATATATGCAGACATATGCACCTACAACTTTAGCAGCAGCACGTGACTTTTGGACTCTTCGATACACTACAAGCCTGGAAGATGGCAGCCTAGTGATATGTGAGAGATCATTGACATCGTCTACCGGTGGCCCATCGGGGCCTCCTCCATCCAGTTTCGTAAGAGCTGAAATGCTTCCAAGTGGGTATCTTATTCGAGCTTGTGAGGGTGGTTCTCTTATTCACATTGTTGATCATGTTGATTTAGATGCTTGGAGTGTTCCTGAAGTTCTAAGGCCACTTTATGAATCAACAAAGATTCTAGCTCAGAGAATGACTGTAGCTGCCTTACGCTACGTTCGGCAAATTGCTCACGAGGCAAGTGGAGAAATCCAATTGGGTGGGGGCCGCCAACCGGCTGTTTTGAGGACTTTCAGTCAAAGACTCTGCAGGGGCTTTAATGATGCAGTAAATGGATTTATGGATGATGGTTGGTCGCTTCTGGATAGCGATGGAGTAGAGGATGTGACAGTTGTTATTAATTCGTCTCCAAACAAATTCCTCGGTTCGCAATATAACACATCATTGTATCCTACTTTTGGAGGTGTGTTGTGTGCAAAGGCATCAATGTTGCTGCAGAATGTCCCCCCTGCTTTGCTTGTCCGTTTCCTCCGGGAGCATCGTTCAGAATGGGCTGATTATGGAGTCGATGCGTACTCTGCCGCATGTCTTAAAGCCAGTGCATATGCTGTTCCATGTGCAAGACCCGGTGGTTTCTCAAGTGGTCAGGTCATTTTACCACTTGCGCATACCGTTGAGAATGAGGAGTTCTTGGAGGTCGTGCGGTTAGAGGGTCATGCTTTGTTCCCTGAAGAAGCTGCTTTAGGCGGACGGGATATGTACTTATTGCAGCTGTGTAGTGGGGTTGATGACAATGCATTTGGTGCCTGTGCTCAGCTTGTATTTGCACCTATAGACGAATCGTTTGCTGACGATGCTCCCTTGCTGCCATCTGGTTTTCGTGTCATACCATTGGAGTCCAAAACGGATGCGCCTGCTGCGACTCGAACTTTGGATTTGGCATCTACTCTAGAAGTCCGACCTGGCTCTGCTCGTCCAGGCAGTGAAACTGACGCTACAAATTATAGCCTCAGGTCAGTCTTGACTATTGCATTCCAATTCACTTTTGAAAACCACATGCGGGATAGTGTGGCTGCCATGGCGAGACAATACGTGCGAACCGTTGTGGGATCAGTTCAGAGGGTTGCCATGGCTATTGCTCCCTCACAGCTTGGCTCCCAAATCGGTCCAAAAAGCCTTCCCGGCTCCCCAGAGGCTCTCACATTGGCCCAGTGGATCTCACGAAGCTACAGGATCCACACAGGGGCAGAGCTCTTTCAGGTTGAATCCCAATCTGATGCTGTCCTGAAGCAGCTTTGGCACCATTCAGATACAATCTTGTGCTGCTCTGTCAAAACTAATGCTTCTCCTGTTTTCACATTTGCAAACCAAGCTGGACTTGACATGCTCGAAACTACCCTTGTCGCTCTTCAAGATATAATGCTCGACAAGATCCTCGACGATGCTGGTCGGAAGATACTTTGCTCCGAGTTCTCCAAGATAATGCAACAGGGGTTTGCATACCTTCCAGCAGGGATATGCGTCTCGAGTATGGGCAGGCCAGTGTCGTATGAACAGGCAATTGCATGGAAAGTTCTGAATGATGATGATGTCCATCACTGTCTGGCTTTCATGTTCGTTAACTGGTCCTTTATGTGA 2532 47.47 MALAMHRDSSNKQMDTSKYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHTASGTTTDNSCESVVMSGQHHQQQNPTKHTQKDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPTKVAEILKDRLSWFRDCRCVDILSVISTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPSGPPPSSFVRAEMLPSGYLIRACEGGSLIHIVDHVDLDAWSVPEVLRPLYESTKILAQRMTVAALRYVRQIAHEASGEIQLGGGRQPAVLRTFSQRLCRGFNDAVNGFMDDGWSLLDSDGVEDVTVVINSSPNKFLGSQYNTSLYPTFGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASAYAVPCARPGGFSSGQVILPLAHTVENEEFLEVVRLEGHALFPEEAALGGRDMYLLQLCSGVDDNAFGACAQLVFAPIDESFADDAPLLPSGFRVIPLESKTDAPAATRTLDLASTLEVRPGSARPGSETDATNYSLRSVLTIAFQFTFENHMRDSVAAMARQYVRTVVGSVQRVAMAIAPSQLGSQIGPKSLPGSPEALTLAQWISRSYRIHTGAELFQVESQSDAVLKQLWHHSDTILCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKILDDAGRKILCSEFSKIMQQGFAYLPAGICVSSMGRPVSYEQAIAWKVLNDDDVHHCLAFMFVNWSFM 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 78865713 78873863 - Tan0017429.1 Tan05g2703 754011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2703 843 Gene3D - 9 84 - -
Tan05g2703 843 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677(InterPro)
Tan05g2703 843 CDD START_ArGLABRA2_like 160 375 - -
Tan05g2703 843 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Tan05g2703 843 Pfam Homeodomain 18 76 IPR001356 GO:0003677(InterPro)
Tan05g2703 843 SMART HOX_1 15 81 IPR001356 GO:0003677(InterPro)
Tan05g2703 843 SUPERFAMILY Bet v1-like 166 374 - -
Tan05g2703 843 Gene3D - 185 373 IPR023393 -
Tan05g2703 843 Pfam START domain 166 373 IPR002913 GO:0008289(InterPro)
Tan05g2703 843 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Tan05g2703 843 ProSiteProfiles START domain profile. 156 383 IPR002913 GO:0008289(InterPro)
Tan05g2703 843 MobiDBLite consensus disorder prediction 138 157 - -
Tan05g2703 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 12 843 IPR044830 GO:0003700(InterPro)
Tan05g2703 843 Coils Coil 87 114 - -
Tan05g2703 843 CDD bZIP 70 109 - -
Tan05g2703 843 Pfam MEKHLA domain 699 842 IPR013978 -
Tan05g2703 843 CDD homeodomain 18 78 IPR001356 GO:0003677(InterPro)
Tan05g2703 843 SMART START_1 165 374 IPR002913 GO:0008289(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2780 Tan-Chr3:80801218 Tan05g2703 Tan-Chr5:78865713 0.00E+00 dispersed
Tan05g2703 Tan-Chr5:78865713 Tan06g0255 Tan-Chr6:2072907 0.00E+00 dispersed
Tan03g2779 Tan-Chr3:80801218 Tan05g2703 Tan-Chr5:78865713 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27608 PF01852 START 2.20E-51 CL0209 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2703 K09338 - csv:101211318 1595.1