Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2751 ATGTTCTGCAGTTTGTTTGATCAGATGGACAATAATAATTATCAGCAAGCCGGTGATTTAACTGATGTAATTCGAGCCAGTTCCGCCGCCGGCCTCTCATCGGAATTCTCTCTCGACCCTTCTTCCGGCGACCGCCGCCTCTGGCCCCACCTTCCCGTCGATGACTCTTCCATGAGTTTTGGAGATCCGTTGATGTTTTCCACTGGTAGTAGTGCTCGAGATCCGTTTCCTCATCCTCATTTTTCTGCTTTCAATTTCGCTTCTGACGGCGGCGGAGGTGTGGGCTTGGCAGCGGCGGACCGGCCGTGTAATATATTTTCGCGAATGTTGCAGATCTCTCCGAGTTCGAAAGTGGGTGGTGGTGTAATTAGTACTCCTCCATGTGATTCGCCGGCGGCGGTGGGGAATTCTCCGGGCTCAACTTCAACGACGAAAGCTCCGCCGAGCAGTGGCTCGAACCCGCTTTGCTTAATGGATAATTCCGAGCTGCAGATCTCTCCTCCGCGAAATCCGGCCATTAAAAGAAGGAAGAGCCAAGTGAAGAAGGTGGTGTGCATTCCGGCGCCGGCGCCGGCGAACAGCCGATCAAGCAGCGGCGAAGTGGTTCCTTCTGATCTATGGGCGTGGAGGAAGTATGGACAAAAACCCATCAAAGGATCTCCATATCCAAGGGGATATTACAGGTGCAGCAGCTCCAAGGGCTGCTCCGCCCGAAAGCAGGTCGAGCGCAGTCGCACCGACCCCAACATGCTCGTCATCACCTACACCTCGGAGCACAATCACCCATGGCCCACTCAACGCAACGCTCTCGCGGGCTCAACTCGCTCCCACCCGTCCCGAACCTCCGCCTCCACCCCCATCACCACCGCCATCGCCCATAAAACAAACCCGAAACACGAGCACAACAATAAAAACCTGGTGACCACAGTAAAGGAGGAAGAAATGGACGAAGACCAGACGACAGAGAAAGCAGCAACAACAACAGCAAACGAACATCGAGAGGAGGGAGATCATCAGGAGTTCCCCTACGACTTAATTTTCGCCGAATTTGCCAATCAAATGAACGACCGCGATAATCATCATCATCATCATGATCATCATCATTTAGCGGACCCGATGGACAACAATCTGCTGCTGTTCAGTAGCCATGGCTTTAGTATAGGAAATGATGAGGAGCGCAGTAAAGATCCATTTTTGGAGCTCTATGATTGGGCAGAGAATTCAAATGGGAGCTTGTTCAAGGAAGCTAAAGGAGGTTGA 1260 52.3 MFCSLFDQMDNNNYQQAGDLTDVIRASSAAGLSSEFSLDPSSGDRRLWPHLPVDDSSMSFGDPLMFSTGSSARDPFPHPHFSAFNFASDGGGGVGLAAADRPCNIFSRMLQISPSSKVGGGVISTPPCDSPAAVGNSPGSTSTTKAPPSSGSNPLCLMDNSELQISPPRNPAIKRRKSQVKKVVCIPAPAPANSRSSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSHPSRTSASTPITTAIAHKTNPKHEHNNKNLVTTVKEEEMDEDQTTEKAATTTANEHREEGDHQEFPYDLIFAEFANQMNDRDNHHHHHDHHHLADPMDNNLLLFSSHGFSIGNDEERSKDPFLELYDWAENSNGSLFKEAKGG 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 79553658 79557536 + Tan0020727.1 Tan05g2751 754059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2751 419 MobiDBLite consensus disorder prediction 312 339 - -
Tan05g2751 419 SUPERFAMILY WRKY DNA-binding domain 201 264 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan05g2751 419 FunFam probable WRKY transcription factor 14 176 257 - -
Tan05g2751 419 MobiDBLite consensus disorder prediction 120 178 - -
Tan05g2751 419 SMART WRKY_cls 203 263 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan05g2751 419 MobiDBLite consensus disorder prediction 130 167 - -
Tan05g2751 419 Gene3D WRKY domain 176 257 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan05g2751 419 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 80 364 IPR044810 GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)
Tan05g2751 419 Pfam WRKY DNA -binding domain 205 262 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan05g2751 419 ProSiteProfiles WRKY domain profile. 198 264 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2302 Tan-Chr4:81187414 Tan05g2751 Tan-Chr5:79553658 5.90E-26 dispersed
Tan04g2303 Tan-Chr4:81187414 Tan05g2751 Tan-Chr5:79553658 7.90E-13 dispersed
Tan05g2522 Tan-Chr5:76564847 Tan05g2751 Tan-Chr5:79553658 1.00E-30 dispersed
Tan05g2751 Tan-Chr5:79553658 Tan07g0391 Tan-Chr7:7693125 8.80E-32 dispersed
Tan10g0253 Tan-Chr10:2242871 Tan05g2751 Tan-Chr5:79553658 2.90E-38 transposed
Tan03g2814 Tan-Chr3:81078287 Tan05g2751 Tan-Chr5:79553658 3.10E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27611 PF03106 WRKY 2.20E-25 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2751 - - - 0.0