Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2763 ATGGACCAGAATAAATTGGGAGCAGATTCTCATGCAAAAGGGGATTATTCTTCCAAGGGTAGTCATAAAAGTAACCAGACTGTTGAGAAGTTAGGAAGTCCTCAGCATCAGAAGATTTCAGCTAGATGGCACCCGGAAGAAGCGTGCAGGCCTTTAATTGATGAAGCACCTGTATTTTATCCTACTGTTGAGGAATTTGAAGATACACTTGGATACATAGCTAAAATTCGTCCTCAAGCAGAATCTTATGGTATATGCCGGATTGTCCCTCCGCCTTCTTGGAATCCACCATGTGTTCTCAAAGAGAAATGTATATGGGAAAATGCCAAGTTTTCTACTCGTATTCAGCAAGTTGATTTGCTACAAAATAGGGAGCCCATGAAAAAGAAAAGTAGAGGCCGAAAACGCAAGCGAAGGAAGCACTCAAAAGCAGGGACATCAGCTAGAAGCACCAATCTTGGTGTAGAAGCAAACGCTACTTCTGAGTCTGATGAAAAATTTGGATTCAATTCTGGGTCAGATTTCACTCTCAAAGAATTCCAGGCACGTGCAGATAATTTTAAGGAATGTTATTTTGGAATTAAGCAGGCTCAAGAGGATTTAAATTTTGATACCGAATCTAGCAAGAGAAGGGAGCCTTCTGTGGAGGATATAGAGGGTGAATACTGGCGGATAGTTGAAAAATCTATAGATGAGGTTGAGGTTTACTATGGAGCTGATATAGAATCAGCAACATTTGGCAGTGGCTTTCCCAAGGTCTCATCCATGGTTACTGAAGGAAATTCAGATCCGTATGTAAAGTCGGGTTGGAATCTTAATAACTTCCCTCGCTTGCCAGGTTCTGTTCTGTGTTTTGAGGAAAGTGATATATCCGGAGTTCTAGTTCCATGGCTCTATGTTGGAATGTGCTTTTCATCATTTTGTTGGCATGTTGAAGATCACCATCTTTACTCTTTAAACTATATGCACTGGGGCGATCCAAAAGTGTGGTATGGAGTTCCTGGAAGCCACGCGCCTTCTTTAGAAGCTGCAATGAAAAAACATTTGCCTGATTTGTTTGAAGAACAGCCAGATTTACTTCATGAATTGGTCACTCAATTATCTCCTTCAGTTCTCAAATCTGAAGGAGTACCTGTGTATCGAGTAGTCCAGAATTCCAGGGAGTTCGTTCTTACCTTTCCAAGGGCATATCACGCAGGATTTAATTGTGGTTTCAACTGTGCTGAGGCTGTGAATGTGGCACCGGTTGACTGGTTAACTCATGGGCAAAATGCTGTAGAACTTTATAGTGCACAACGACATAGGACATCACTTTCACATGATAAATTGTTATTTGGATCAGCTCGGGAAGCTGCCCAGGCCCTTTGGGAGCTATTAGTTCTAGAAAAGAAAACTCCAAGTAATCAAAGATGGAAAAGTGTGTGTGGAAAAGATGGAGATCTTACAAAAGTGATCAAGACAAGGGTGAAGATGGAGGAGGAAAGAATGAATTGCCTTCCAACTCTTATGAAGTTGCAAAAGATGGAAAGTGAGATTGATTGCAAAAGTGAGAGAGAGTGTTATGCCTGCTTTTACGACTTATATCTCTCTTCAACCTCGTGCAAGTGTTCCCCCGATCGATTCTCATGCCTTAAGCATGCTAGTAACTTTTGCTCGTGTCCAGTAGATGACAGGTGTGTGCTCTTTCGCTACAGTATAAATGAGCTGCACACACTTGTTGGAGCATTAGAAGGGGGATTAGATGCCATTAAAGAATGGGCCTCAAGATACTGTAAAATGGAAAAGGACAATGAATCTGTAGCTAAGGTGAAGTTGGACAGCGGATTAATTGAAAAACCATCTTGGTCCCCAGAAATAATAGATAAGCTAAAAAGAACAGACGTCCCATGCAGTTCATCTAGTCACGCTTCTTCAGAAGTAGTGCAGTCAGAGTCTCACCGAGGATCGCTTAGTTTGAATACTTCCCACCTTAGTTCAGATAGTCAGAATGACATTGTAAACAGTGAAGTTATGGTAATAAATAAAGAAGAGAAGGTGGGGCAGGAGAGCTGCATTGATTTGAACCTTGAAATAATTTCTGATGAGAACGGTAGTTGTGGGCCTCACAAATCTGATGGCAAGATAATCATTGATTTGGAGGAAACGTACACTTCGTTGTTTGAAGAAAAAGACGTTTGTAAAGCAGCACGTGAATCAGATTTAATGGAACTCGACACTAATCATGTAAACACTTCTCCGGTTAATGGAACGATAGGTGTGAGAATGTGTGGATCTAATGGTAGTAAGTTGTTTGGAGTTGATCTTTCACAGTCGCAGTCAGCATTTCCATCTAACAATTCCTCAAAAGTAGAAACTCTAAAACACTTGGATAAAAGGATACCATCTTGGCCAAGTTCTCCTTGGAATTTGGTTCCTTCTGTTGAACCTATAAATATTGGAACAATTATGTTTGGAAAGCCTTGGCACTGCAAGAAGGCCATATTTCCAAAAGGTTTTAGAAGCCGAGTGAAATTCTTTAGTGTACTTAATCCAACTAGTATTGTTACCTACACATCAGAAGTTCTTGATGGTGGGCTCCTGGGACCTCTATTCAAGGTGGCATTGGAAGAATCTCCCAGTGTGAACTTCACTAATGCTTCAGCAACCAAATGCTGGGGCATGGTAGTACAGAGATTAAACCAAGAAATCGAAAGACAGAACCTTAGATTGGGAGGAACAGCTCCTTTGCAGCTTTTGGAGGAAGTTAATGGACTTGAAATGTTTGGATTTCTTTCACCTCACGTTATTCAGGCTATCGAGGCCCTTGATCCTAAACACCAGTGTATGGAGTATTGGAACCACCGGCATCATGGCTTACCCGAAAATTCAGGTGACAACACTAACTGCAAAAGTTCTGCTTTAAGATTGAATTTCTCTTCGGACGAAACAAGTGCAACTGCTTTTGATATCAATAGGGAAGAGGATGAGAATGTCAATCCAACTATAGGAATGGAAGGGCACCATCAAAATGAAGAGGTTCGGTCAGTTATAAAGGGACTGTTAAATAAAGCAAGTCCTGAAGAATTGAGCGTGCTGTGGAGCATATTCTGCACAGAACTGCAAACTACTGAATGGAGATCAGAATTTGCAGCAATGATCAAAGAGAAACAGGAAAAATGTAGATAG 3165 41.11 MDQNKLGADSHAKGDYSSKGSHKSNQTVEKLGSPQHQKISARWHPEEACRPLIDEAPVFYPTVEEFEDTLGYIAKIRPQAESYGICRIVPPPSWNPPCVLKEKCIWENAKFSTRIQQVDLLQNREPMKKKSRGRKRKRRKHSKAGTSARSTNLGVEANATSESDEKFGFNSGSDFTLKEFQARADNFKECYFGIKQAQEDLNFDTESSKRREPSVEDIEGEYWRIVEKSIDEVEVYYGADIESATFGSGFPKVSSMVTEGNSDPYVKSGWNLNNFPRLPGSVLCFEESDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHWGDPKVWYGVPGSHAPSLEAAMKKHLPDLFEEQPDLLHELVTQLSPSVLKSEGVPVYRVVQNSREFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLTHGQNAVELYSAQRHRTSLSHDKLLFGSAREAAQALWELLVLEKKTPSNQRWKSVCGKDGDLTKVIKTRVKMEEERMNCLPTLMKLQKMESEIDCKSERECYACFYDLYLSSTSCKCSPDRFSCLKHASNFCSCPVDDRCVLFRYSINELHTLVGALEGGLDAIKEWASRYCKMEKDNESVAKVKLDSGLIEKPSWSPEIIDKLKRTDVPCSSSSHASSEVVQSESHRGSLSLNTSHLSSDSQNDIVNSEVMVINKEEKVGQESCIDLNLEIISDENGSCGPHKSDGKIIIDLEETYTSLFEEKDVCKAARESDLMELDTNHVNTSPVNGTIGVRMCGSNGSKLFGVDLSQSQSAFPSNNSSKVETLKHLDKRIPSWPSSPWNLVPSVEPINIGTIMFGKPWHCKKAIFPKGFRSRVKFFSVLNPTSIVTYTSEVLDGGLLGPLFKVALEESPSVNFTNASATKCWGMVVQRLNQEIERQNLRLGGTAPLQLLEEVNGLEMFGFLSPHVIQAIEALDPKHQCMEYWNHRHHGLPENSGDNTNCKSSALRLNFSSDETSATAFDINREEDENVNPTIGMEGHHQNEEVRSVIKGLLNKASPEELSVLWSIFCTELQTTEWRSEFAAMIKEKQEKCR 1054
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 79664890 79674156 - Tan0018211.5 Tan05g2763 754071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2763 1054 SMART JmjN_1 55 96 IPR003349 -
Tan05g2763 1054 SUPERFAMILY Clavaminate synthase-like 261 458 - -
Tan05g2763 1054 Pfam F/Y-rich N-terminus 806 857 IPR003888 GO:0005634(InterPro)
Tan05g2763 1054 Pfam jmjN domain 57 90 IPR003349 -
Tan05g2763 1054 Gene3D Cupin 41 414 - -
Tan05g2763 1054 ProSiteProfiles JmjC domain profile. 264 430 IPR003347 -
Tan05g2763 1054 ProSiteProfiles FYR domain FYRN motif profile. 799 857 IPR003888 GO:0005634(InterPro)
Tan05g2763 1054 SMART cupin_9 264 430 IPR003347 -
Tan05g2763 1054 SMART fyrc_3 863 955 IPR003889 GO:0005634(InterPro)
Tan05g2763 1054 Pfam F/Y rich C-terminus 861 950 IPR003889 GO:0005634(InterPro)
Tan05g2763 1054 MobiDBLite consensus disorder prediction 19 34 - -
Tan05g2763 1054 MobiDBLite consensus disorder prediction 1 42 - -
Tan05g2763 1054 ProSiteProfiles FYR domain FYRC motif profile. 859 949 IPR003889 GO:0005634(InterPro)
Tan05g2763 1054 Pfam JmjC domain, hydroxylase 297 413 IPR003347 -
Tan05g2763 1054 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Tan05g2763 1054 Pfam C5HC2 zinc finger 520 572 IPR004198 -
Tan05g2763 1054 PANTHER LYSINE-SPECIFIC DEMETHYLASE 40 781 - GO:0000785(PANTHER)|GO:0005634(PANTHER)|GO:0006338(PANTHER)|GO:0010468(PANTHER)|GO:0032452(PANTHER)|GO:0034647(PANTHER)
Tan05g2763 1054 MobiDBLite consensus disorder prediction 128 145 - -
Tan05g2763 1054 MobiDBLite consensus disorder prediction 120 159 - -
Tan05g2763 1054 MobiDBLite consensus disorder prediction 628 661 - -
Tan05g2763 1054 SMART fyrn_3 813 857 IPR003888 GO:0005634(InterPro)
Tan05g2763 1054 Gene3D - 804 942 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2761 Tan-Chr5:79664890 Tan05g2763 Tan-Chr5:79664890 0.00E+00 dispersed
Tan05g2763 Tan-Chr5:79664890 Tan08g1009 Tan-Chr8:16185124 9.70E-229 dispersed
Tan05g2762 Tan-Chr5:79664890 Tan05g2763 Tan-Chr5:79664890 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27616 PF02373 JmjC 3.20E-45 CL0029 Tan TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2763 K11446 - csv:101214856 1803.88