Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2801 ATGGCTTCCACTTCACTTCTAAAACTCCTCTCTATCTTCTTCTTTCTCATTTGTTTTCTCACAACCCAAGCCCTTTCACAATCTGATGAATGTGAAACAACAACCAATGAATGCACTAATAAAGAAAAAGCCTTGCGTCTTAAAATCATTGCCATTTTCTCCATCCTCATTGCGAGTGTGATCGGCGTTTGTTCGCCGCTCTTCACCCGATCGATCCCGACATTGCACCCTGATAGAAACATGTTCATCATACTCAAAGCCTTTGCCGCAGGCATCATTCTCGCCACCGGTTTCATGCACGTTTTGCCCGATTCTTTCGACATGCTTTGGTCGAATTGTTTGAAGGAGAATCCATGGCATAAGTTTCCCTTTTCGGGTTTCGTCGCCATGATGTCCGCAATCGTAACCCTCATGGTGGATTCCATGGCTACTAGTTTGTATACCAAGAAACATACCGAAGTTATGCCTGAGAATCCACAAGGAGGAGATGAGGTAGTGTTGCCCGTGGTCAGTGGTGGCCATTTCCATGGCCACCATCATCGAGACGCCAAAGAAATTAATGTTGGTTCTCAATTATTGCGTTATCGTGTTATTGCCATGGTTTTGGAATTAGGAATTGTGGTTCATTCCGTTGTGATTGGACTTTCACTTGGAGCAACAAACGATACATGCACAATCAAAGGTCTAGTGGCTGCTCTTTGTTTCCATCAAATGTTTGAAGGGATGGGCCTTGGTGGCTGTATTCTCCAGGCAGAATACAAGTGGATGAAGAAAGCAATAATGGCATTCTTTTTCTCAGTGACAACCCCATTTGGAATAGCCCTAGGAATAGGATTGTCAAGGACATACAAAGAAAATAGTCCTAGTGCCCTAATCACTGTGGGGTTGCTGAATGCTTCTTCAGCTGGCCTTCTCATCTACATGGCTTTGGTGGATCTTCTTTCTGCTGACTTTATGGGCCCAAAGTTGCAGGGCAGCATCAAACTTCAAGTCAAATCCTACATTGCTGTTCTATTGGGAGCTGGTGGCATGTCCTTAATGGCAAAATGGGCTTGA 1056 44.41 MASTSLLKLLSIFFFLICFLTTQALSQSDECETTTNECTNKEKALRLKIIAIFSILIASVIGVCSPLFTRSIPTLHPDRNMFIILKAFAAGIILATGFMHVLPDSFDMLWSNCLKENPWHKFPFSGFVAMMSAIVTLMVDSMATSLYTKKHTEVMPENPQGGDEVVLPVVSGGHFHGHHHRDAKEINVGSQLLRYRVIAMVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKWMKKAIMAFFFSVTTPFGIALGIGLSRTYKENSPSALITVGLLNASSAGLLIYMALVDLLSADFMGPKLQGSIKLQVKSYIAVLLGAGGMSLMAKWA 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 80134388 80137089 - Tan0004290.1 Tan05g2801 754109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2801 351 PANTHER ZINC/IRON TRANSPORTER 42 350 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Tan05g2801 351 NCBIfam ZIP zinc/iron transport family 34 351 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Tan05g2801 351 Pfam ZIP Zinc transporter 46 348 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0349 Tan-Chr1:3014725 Tan05g2801 Tan-Chr5:80134388 6.20E-151 dispersed
Tan02g0022 Tan-Chr2:598251 Tan05g2801 Tan-Chr5:80134388 1.30E-84 dispersed
Tan02g1634 Tan-Chr2:76331643 Tan05g2801 Tan-Chr5:80134388 2.50E-71 dispersed
Tan03g2495 Tan-Chr3:78365967 Tan05g2801 Tan-Chr5:80134388 2.50E-109 dispersed
Tan05g0499 Tan-Chr5:3438268 Tan05g2801 Tan-Chr5:80134388 6.50E-62 dispersed
Tan05g0500 Tan-Chr5:3438753 Tan05g2801 Tan-Chr5:80134388 6.50E-62 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2801 K14709 - csv:101221552 603.594