Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2855 ATGGCTTTGTGGGACTTCCTCTTTGTGTTTTTCTTCTTGATCTTTGCTTCTCTTCCGCTTGTTCGTGCTCTTACTGATGCTTCTGATGTTCAAGCTTTGCAAGTTATATACACCTCATTGAACAGTCCTCCTCAGCTGACTGGTTGGATTGGTAGTGGCGGCGATCCATGTGCAGAGTCATGGAAAGGGGTGGCTTGTGAAGGCTCTGCAGTTGTCTCCATTGAGATTTCTGGTTTGGGGCTGAATGGCACGATGGGTTATGCGCTCTCAAGTCTTTTGTCATTGAAAAATCTTGATATGAGCGACAACAATATTCATGACACGATTCCTTACCAGTTACCACCGAACCTCACAAGCCTAAATATGGCAAAAAACAACTTAACTGGTAACCTTCCTTATTCATTTTCCACCATGGCTTCTCTCAATTATCTGAATATGAGCCATAATTTGCTAGCTCAGGCGATAGGAGATGTTTTCAACAATCTTACTACCCTGGGGACTTTGGACCTTTCTTTCAACAACTTTACTGGGGATCTTCCTAATTCCTTGAGCTCATTATCCAATGTTTCTTCCCTCTTTTTGCAGAACAACCAATTGACTGGTTCTCTCAATAATCTTATTAGTTTGCCCCTGACCACTCTAAATGTAGCAAATAATAATTTCAGTGGATGGATTCCTCAAGAACTGAAGTCGATTGAAAATTTCATATACAATGGAAATTCATTTGACAATAATCCTGCACCTCCTCCACCGCCTTTTACTCCACCTCCTCCGGGTAGATCTCGTAACAGCCCCAGACATCCTGGGTCGGGTGGTGGCACCCACACTGCCTCAAGTTCTGATAGCAGCTCTTCCCACTCGAACAAAGGCTTATCCGTTTTGGCTATAGTGGGGATAATTTTGGGTGCTATAATTTTTGTCCTCATTGTCTTAGTTGCTTTTGCCGTATGCATCCAGAAGAGAAAACGGAAGAACATTGGTCTAAGAGCTTCCAGTGGAAGGCTGTCTATTGGCACTAGTGTAAATACTGAGGTGCAAGAGCATCGGGTAAAAAGCGTGGCTGCTGTTGCAGATATTAAGCCACTTCCTGCAGAGAAAATGAATCCTGAGAGATTACAAGCGAAAAATGGATCAGTGAAAAGGATAAAGTCCCCTATTACTGCTACTTCTTACACCGTTGCTTCTCTTCAAAGTGCAACAAATAGCTTTAGCCAAGAATGCATAGTTGGTGAAGGTTCTCTCGGCCGTGTATACAAAGCAGAGTTTCCAAACGGGAAGATAATGGCAATTAAGAAAATCGACAATGCAGCATTGTCACTACAGGAAGAAGACAATTTTCTTGAAGCGGTTTCAAACATGTCAAGATTGAGGCATACAAACATTGTCACACTAAATGGTTATTGCGCGGAGCATGGTCAGCGTCTTCTAGTTTACGAGTTCGTTGGAAATGGAAGTTTACATGACATGCTCCATTTTGCTGAAGATAGTAAGACACTGACATGGAATGCACGTGTCCGGGTAGCACTTGGAACCGCCAGAGCTTTAGAATACTTGCATGAGGTATGCTTGCCTTCCGTTGTACATAGAAACTTGAAGACTGCAAACATATTACTTGATGAAGAGCTCAACCCCCATTTGTCAGATTGCGGTTTGGCTGCTTTAACACCCAACACCGAGCGACAGGTTTCTACTCAGATGGTTGGTTCCTTTGGCTATAGTGCTCCAGAATTTGCCTTGTCAGGAATATACACCGTCAAAAGTGACGTGTACAGCTTCGGGGTGGTGATGTTGGAGCTCTTGACTGGACGAAAGCCGCTTGACAGTTCCAGAGCAAGATCAGAGCAGTCACTTGTGAGATGGGCTGCTCCTCAACTTCATGATATCGACGCCTTAGCGAAAATGGTAGATCCTACTTTGAATGGAATGTACCCTGCAAAATCTCTGTCGCGCTTTGCCGACATTATCGCTCTCTGTGTTCAGCCCGAACCTGAATTTCGACCTCCTATGTCGGAAGTAGTACAAGCATTGGTGCGTTTAGTGCAAAGAGCCAGTGTGGTAAAGAGGCATTCAAGCGACGAGTCGGGTTTCAGTTACAAAACGCCTGACCACGATGCAGTTGAGTTGCCATTTTGA 2133 44.16 MALWDFLFVFFFLIFASLPLVRALTDASDVQALQVIYTSLNSPPQLTGWIGSGGDPCAESWKGVACEGSAVVSIEISGLGLNGTMGYALSSLLSLKNLDMSDNNIHDTIPYQLPPNLTSLNMAKNNLTGNLPYSFSTMASLNYLNMSHNLLAQAIGDVFNNLTTLGTLDLSFNNFTGDLPNSLSSLSNVSSLFLQNNQLTGSLNNLISLPLTTLNVANNNFSGWIPQELKSIENFIYNGNSFDNNPAPPPPPFTPPPPGRSRNSPRHPGSGGGTHTASSSDSSSSHSNKGLSVLAIVGIILGAIIFVLIVLVAFAVCIQKRKRKNIGLRASSGRLSIGTSVNTEVQEHRVKSVAAVADIKPLPAEKMNPERLQAKNGSVKRIKSPITATSYTVASLQSATNSFSQECIVGEGSLGRVYKAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHTNIVTLNGYCAEHGQRLLVYEFVGNGSLHDMLHFAEDSKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKTANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWAAPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESGFSYKTPDHDAVELPF 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 80911037 80916707 + Tan0017466.1 Tan05g2855 754163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2855 710 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 26 253 - -
Tan05g2855 710 Pfam Protein kinase domain 406 674 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2855 710 MobiDBLite consensus disorder prediction 244 263 - -
Tan05g2855 710 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515(InterPro)
Tan05g2855 710 Pfam Leucine Rich Repeat 165 186 IPR001611 GO:0005515(InterPro)
Tan05g2855 710 Pfam Leucine Rich Repeat 94 113 IPR001611 GO:0005515(InterPro)
Tan05g2855 710 Pfam Leucine Rich Repeat 211 231 IPR001611 GO:0005515(InterPro)
Tan05g2855 710 SUPERFAMILY Protein kinase-like (PK-like) 383 676 IPR011009 -
Tan05g2855 710 Gene3D Transferase(Phosphotransferase) domain 1 481 703 - -
Tan05g2855 710 MobiDBLite consensus disorder prediction 267 286 - -
Tan05g2855 710 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g2855 710 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Tan05g2855 710 Gene3D Phosphorylase Kinase; domain 1 364 480 - -
Tan05g2855 710 CDD STKc_IRAK 409 679 - -
Tan05g2855 710 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 481 690 - -
Tan05g2855 710 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 368 480 - -
Tan05g2855 710 MobiDBLite consensus disorder prediction 240 286 - -
Tan05g2855 710 Gene3D Ribonuclease Inhibitor 25 254 IPR032675 -
Tan05g2855 710 SUPERFAMILY L domain-like 25 234 - -
Tan05g2855 710 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 211 681 IPR046959 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2855 Tan-Chr5:80911037 Tan11g2046 Tan-Chr11:43040410 2.60E-129 dispersed
Tan05g2855 Tan-Chr5:80911037 Tan04g2828 Tan-Chr4:87719541 4.10E-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67674 PF00069 Pkinase 8.00E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2855 - - - 0.0