Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2860 ATGGAGTTTTCTTTAATACTTTTTCTTTTGTTTGGAAGTTCTCTTCTTATTTCTTGTTTTGCAGAAGACAGAGAAATTTACTTGGTTTTAATGGAAGAGAATCACCCAATTTCCTTCCATGAAACTCGAGCAAGAGAAATGGAAGCTTCACACGATCATCTTCTTGAAAACACTCTAAAAAGCTACACAAAGCTCCACAGCTTCAAGAACATCATCAATGGTTTTGCACTGAGACAAGTTGAAGGAGTTAAAGTAGTAGAAAGAGACAGAGGAGTGACAAAAATGACAACTTACACCCCTAAATTTCTAGGGGTGCCCTTCAAATCAAGGGCATGTACATGGAAGAAAAAATTAGACAAAAAAATTAATATTGGTGGGGATGGGATTGTGATTGGATTTGTGGACTCTGGGATTGACCCAACACACCCAAGTTTTGGTTTTGATTATGATTATGATTATGATAATGATCTTTCAAAAGAGTTGTTTTTTTGTGAAGAAGGTCCTTTTTTTCCTTCAAGTTCTTGCAATGGGAAGATAGTTAGTGCTAGGTTTTTCTCAGCTGGGGCTCAAGCTGTATCTAAGCTTAATTCTTCTCTCGACTTTCTCTCCCCTTTTGATGCTGAAGGCCATGGAAGCCACGTGGCATCCATAGCTGCTGGGAATGATGGAGTTCCAGTTATTGTGAATGGTTTCTTCTATGGATTGGCCAGTGGGATGGCGCCACGTGCACGAATTGCTGTTTATAAGGCAGTTTATCCAACAGTGGCTACTCTAACAGATGTAGTTTCAGCAATAGATCAAGCAGTTGTTGATGGAGTTGATATATTGGCATTATCAGTTGGACCAAATGAACCACCAGAAGAAGGATTTACCTTCCTAAGCATATATGACATTGCCATATTATCTGCTACACGAGCTGGAGTCCTTGTGGTTCAGGCAGCTGGAAATAACGGCCCGGCCTCGGCAACCGTCGTCTCCTACAGCCCTTGGGCGGTCGGTGTTGCAGCTTCCGGCACCGACAGAGTTTATCCGGCCTCACTTCTCCTTGGCAATGGCCAAAAAGTTGGAGGACTAGGATTATCTGGACCCACTTTAGGGAGTGAATTTTTTCTACATAAGCTAGTATTAGCCAAGGATGCAATGAAGCAAAATGAGACAAATCCCAGTGAAGAAGAGTGCCAATATCCTGAAGCTTTTGACCCAAATATTGTCCAAAATAGCATAGTTCTCTGTTCTTTCTCTCAAGGATTCCTCAATGGAACCTCCTCCCTCACAGCCATCATTCACACTGCAACAACACTCAGATTCATGGCTTTTGCTCTCATTGCAAATCCAAACTATGGTGATTTCATTGCAGAGCCTATTCCTTTTAGAGTTCCCGGCATTCTCGTCCCGAGCGCATCGGATTCTCAGGTGATACTGAAATACTATGAAGCAAATACATGCAAGGATGGGAGGGGAATGGTAACAGAATTTAAAGGGAAAGCAGCCATAGGAGAAGGAAGAGTTGCTTCATTTGGAGGCCAAGCACCAACAGTTAGCAGATTTTCATCAAGAGGACCAGATTACATTAACATAAATAGAACTGTAGCTGATGTGCTAAAGCCAGATATTCTTGCACCAGGTCACCAAATTTGGGCTGCTTGGAGCCCCCTCAGTGCCTCAGAGCCACTTTTAAAGGGATACCAATTTGCACTGTTGTCTGGAACAAGTATGGCAGCACCTCATATTGTGGGAATAGCAGCACTTATCAAGCAAAAGAATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCCACAACTGCTACAAAGTATGATATGAATGGAGACCTTATTCAAGCTGAGGGATTCAACATTCATACTTCATATCCTTCTACTCCCTTCGATTTCGGTGCTGGTCTCGTCTCACCGACCAACGCTTTGGACCCGGGACTAGTCTTCCCATCAGAACATGAAGACTATATAAACTTCTTATGCTCATTACCTGGGGTTGATCCTACTGTGATCAAAAGCACCACTGGTGAAAAGTGCAATAGCTCTGTCCCACAGCCACAGCCTGCAGATCTGAACCTTCCTTCAGTCACAATATCATCACTGATTGGGCATCAGCTGCTGCACAGAAGAGTGAAGAATGTAGGAGGCAAAGTGGAGACATATGTGTGTTCAGTCATCCCACCAAATGGGACAATAGTCAATATCAATCCACCATGGTTCACCATAGCACCAGAAGGGATCCAAAAATTGGAAATACAAATCAATGCCACACACAAAATGGATCACTTTACCTTTGGGGAAATTGTTTTCACAGGAAGTTTAAACCATATTGCAAGAATCCCTTTGTCAGTTTTGGCTGTTTCTGTATCCTAA 2373 42.6 MEFSLILFLLFGSSLLISCFAEDREIYLVLMEENHPISFHETRAREMEASHDHLLENTLKSYTKLHSFKNIINGFALRQVEGVKVVERDRGVTKMTTYTPKFLGVPFKSRACTWKKKLDKKINIGGDGIVIGFVDSGIDPTHPSFGFDYDYDYDNDLSKELFFCEEGPFFPSSSCNGKIVSARFFSAGAQAVSKLNSSLDFLSPFDAEGHGSHVASIAAGNDGVPVIVNGFFYGLASGMAPRARIAVYKAVYPTVATLTDVVSAIDQAVVDGVDILALSVGPNEPPEEGFTFLSIYDIAILSATRAGVLVVQAAGNNGPASATVVSYSPWAVGVAASGTDRVYPASLLLGNGQKVGGLGLSGPTLGSEFFLHKLVLAKDAMKQNETNPSEEECQYPEAFDPNIVQNSIVLCSFSQGFLNGTSSLTAIIHTATTLRFMAFALIANPNYGDFIAEPIPFRVPGILVPSASDSQVILKYYEANTCKDGRGMVTEFKGKAAIGEGRVASFGGQAPTVSRFSSRGPDYININRTVADVLKPDILAPGHQIWAAWSPLSASEPLLKGYQFALLSGTSMAAPHIVGIAALIKQKNPSWTPSMIASAMSTTATKYDMNGDLIQAEGFNIHTSYPSTPFDFGAGLVSPTNALDPGLVFPSEHEDYINFLCSLPGVDPTVIKSTTGEKCNSSVPQPQPADLNLPSVTISSLIGHQLLHRRVKNVGGKVETYVCSVIPPNGTIVNINPPWFTIAPEGIQKLEIQINATHKMDHFTFGEIVFTGSLNHIARIPLSVLAVSVS 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 80934143 80943721 - Tan0014692.1 Tan05g2860 754168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2860 790 SUPERFAMILY Subtilisin-like 95 647 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan05g2860 790 ProSiteProfiles Serine proteases, subtilase domain profile. 106 643 - -
Tan05g2860 790 Pfam Subtilase family 126 610 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan05g2860 790 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Tan05g2860 790 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Tan05g2860 790 PRINTS Subtilisin serine protease family (S8) signature 568 584 IPR015500 -
Tan05g2860 790 ProSitePatterns Serine proteases, subtilase family, histidine active site. 210 220 IPR022398 -
Tan05g2860 790 Gene3D Peptidase S8/S53 domain 128 656 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan05g2860 790 CDD Peptidases_S8_3 92 605 IPR034197 -
Tan05g2860 790 Gene3D - 660 787 - -
Tan05g2860 790 Pfam Fibronectin type-III domain 690 784 IPR041469 -
Tan05g2860 790 CDD PA_subtilisin_like 346 481 - -
Tan05g2860 790 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 749 IPR045051 -
Tan05g2860 790 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 131 142 IPR023827 -
Tan05g2860 790 Gene3D - 340 506 - -
Tan05g2860 790 ProSitePatterns Serine proteases, subtilase family, serine active site. 569 579 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2860 Tan-Chr5:80934143 Tan08g0879 Tan-Chr8:11423862 6.70E-158 dispersed
Tan05g2860 Tan-Chr5:80934143 Tan01g0328 Tan-Chr1:2890649 3.30E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2860 - - - 0.0