Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2932 ATGGCGGACCGATATCAAAAGCTGAACGCGGCCGCCCATTCTGTTGATCCCCGGAGCGGTTTCTGTCCTCAAACCAAGATTTTCCATAGCCTCCGACCACCGCTCGCGCTTCCGCCGATATCTCAGCCTCTCACCGTTGCTGGACACGCACTTTCTCTTCTCCGATCATCCCCTCCTCCGGCCAACACTACCGCCCTCGTCGACTTCAACTCCGGCGTCACTGTTTCCTACAGCCTTTTCCTCCGCCAAATCCGAAACCTCGCCTCTAATCTTAGAACCTTTTGCTCCCTCTCCAATGGTAAAGTGGCCTTTATTCTTTCGCCGACTTCTCTGCAAGTCCCTGTGTTGTATTTTGCTCTGTTATCTCTCGGTGTTATTGTCTCTCCCGCTAATCCAATCGGTTCCCGATCGGAGATTGCTCACCAGATTGAACTCTGTAAACCGGACATTATCTTCGTTACGTTCTCAACGGTGTCCAAGCTCCCGATGTCGAGGGTTCTACTCGGCACTGTCGTGATAGATTCGCCGGAATTTCTATCTATGATGACTAAAAGCAGTCAATCGGATGGAGTGGATGATGGAGTTGTTGACGTCAAAATCAATCAAAACGACTCGGCGGCGATTCTGTACTCGTCAGGGACTACCGGGCGAGTGAAAGGCGTCTTACTGTCTCACCGGAACCTCATAACGGCGATCTCCAGCGCTCAGATATTAGAGACGACGACCAACGAAGGAGAGACGGAGCCACATCCCGTTTCTCTGTGTCTGTTACCTCTGTTCCATGTTTTCGGGTTCTATATGACGATTCGATCGATTTCAGAAGGCCATACGTTGGTTCTGATGCGAAAATTCGACTTCGAAGGAATGTTAAGGGCCGTGGAGAAGTATAGGGTTACTTACATCCCGGTTTCTCCGCCGCTGGTTGTGGCGATGGCTAAGTCGGAGCTGGTGGCGAAGTACGATCTCAGTTCTCTTCAAATTTTGGGATGCGGCGGCGCTCCTCTTGGGAAAGAAGTCATCGATAAATTCCATGTGAAGTTCCCCGACGTAGAAATTGTACAGGGATATGGCTTGACAGAGAGTTCGGCAGCGGCATCAAGGACTCTAGGGCCTGAAGAATGCAGTAATACAAGTTCAGTTGGTCGTTTATCTGAAAGTCTGGAAGCCAAGATAGTGGATCCTGAAACTGGAGAGGCCTTACCTCCTGGTCACAAAGGAGAGCTTTGGCTGCGAGGTCCAGGAATCATGAAAGGTTATGTTGGAGATGAGAGGGCAACTGCTGAAACCTTGCATCCAGAGGGATGGCTAAAGACTGGTGATCTTTGCTATTTTGATTCTGATGGTTATCTCTACATTGTCGATAGATTAAAAGAATTGATCAAGTACAAGGCTTATCAGGTTCCCCCTGCTGAATTGGAACATTTACTTCAATCCAACCCCGAGATCTCCGACGCCGCTGTGATACCCTATCCTGATGAAGAAGCTGGAGAGATTCCTATGGCTTATGTTGTTAGAAAGCCTGGAAGCAATATCACTGAGGCTCAAGTTGCACCATACAAGAAAATCCGGCGAGTGTCGTTTGTCGATGCAATCCCGAAATCGCCTGCAGGGAAGATTCTGAGGAGGGAGCTTTATCCGCGTGCTCGATCACGCATCACTTTCTTCGAGTCCACTTCCATGGCGGATCGTAATCCAAACTCCATCGCCGCCCATTTCGTTGATCCTCGAAGCGGTTTCTGTTCTGGAACGAAGATTTTCCACAGTCTCCGACCACCGCTCTCACTTCCACCAATATCTCAGCCTCTCTCCTTAACTGAACACGCCCTTTCTCTCCTCCAATCATCCCCTCCCCCTGCAAATGCCACTGTTCTCATCGATTCCAACTCCGGCGTCCGTCTCTCCTACGCCATTTTCCTCCGCCAAATTCGAACCCTCGCCGCTAATCTCAAAGCCCTAACCTCCCTCTCCAATGGTCAAGTGGCTTTCATTCTCGCACCGACTTCTCTGCAAGTCCCTGTGTTGTATTTCGCTCTGTTATCTCTCGGTGTTGTTCTCTCTCCGGCGAATCCGACTGGTTCTGAATCGGAGATTGGTCACCAGGTTCGGCTCTGTAAACCGGTCATTGCCTTCGCTACGTCCTCAACGGCGTCCAAGCTCCCAAGGCTTCAATTCGGCACCGTCCTGATCGATTCGCCTGAATTTCTCTCTATGATGACCGAAATCAATCGATCTGATGGAAGAGATAACGGTGTTACCGACGGTAAAATCGATCAATCTGACTCGGCGGCGATTCTGTACTCGTCTGGTACTACAGGGCGAGTGAAAGGCGTGTTACTGAGTCATCGGAACCTTATTACGGTGAACTCTGGGCCTCGTGGTCTTCAATCGGAGGTCAATGGAGAGATGGAGCCACATCCGGTGTCTCTGTGTTTGTTGCCTCTGTTCCATATTTTCGGATTCGTGATGTTGATTCGAGCGATTTCACGAGGCGAAACGTTGGTTCTGATGCAGAGATTCGACTTCGAGGGGATGTTAAGAGCGGTAGAGAAGTTTAGGGTTATGTACATCCCGGTTTCGCCGCCGCTGATGGTGGCGATGGCGAAGTCGGAGCTGGTGGCGAAGTACGATCTTAGTTCTCTTCAAATTTTGGGATGCGGCGGCGCTCCCCTTGGGAAAGAAGTGATCGATAAATTGCATGAGAAGTTGCCCAATGTTGAAATTCTACAGGGATATGGCTTGACAGAGAGTACAGCAGGGGCAGCAAGGACGTTGGGGCCTGAGGAAAGCAGTAACACAAGATCAGTAGGTCGCCTATCTGAAAGTATGGAAGCCAAGATAGTGGATCCTGCATCTGGAGAGGCCTTACCTCCTGGCCACAAAGGAGAGCTCTGGCTGCGAGGTCCAGCAATCATGAAAGGTTATATTGGAGATGACAAGGCAACTGCCGAAACCTTGCATCCAGAGGGATGGCTAAAGACTGGCGATCTTTGCTATTTTGATTCTGATGGATTCCTGTACATTGTTGATAGATTAAAAGAATTGATCAAATACAAGGCTTATCAGGTTCCACCTGCTGAATTGGAACATTTGCTTCAATCCAACCCTGAAATCATCGACGCCGCGGTTATACCCTATCCTGATGAAGAAGCTGGAGAGATTCCTATGGCTTATGTTGTTAGAAAGCCTGGAAGCAATATCACTGAGGCTCAAGTTGCACCGTACAAGAAAATTCGGCGGGTGTCTTTTGTCAAAGCTATCCCAAAATCGCCTTCAGGTAAGATTCTGAGGAGGGAGCTTGTCAAACATGCTCTCTCTCACGGTTCCAATAAGTTGTAA 3336 49.46 MADRYQKLNAAAHSVDPRSGFCPQTKIFHSLRPPLALPPISQPLTVAGHALSLLRSSPPPANTTALVDFNSGVTVSYSLFLRQIRNLASNLRTFCSLSNGKVAFILSPTSLQVPVLYFALLSLGVIVSPANPIGSRSEIAHQIELCKPDIIFVTFSTVSKLPMSRVLLGTVVIDSPEFLSMMTKSSQSDGVDDGVVDVKINQNDSAAILYSSGTTGRVKGVLLSHRNLITAISSAQILETTTNEGETEPHPVSLCLLPLFHVFGFYMTIRSISEGHTLVLMRKFDFEGMLRAVEKYRVTYIPVSPPLVVAMAKSELVAKYDLSSLQILGCGGAPLGKEVIDKFHVKFPDVEIVQGYGLTESSAAASRTLGPEECSNTSSVGRLSESLEAKIVDPETGEALPPGHKGELWLRGPGIMKGYVGDERATAETLHPEGWLKTGDLCYFDSDGYLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEISDAAVIPYPDEEAGEIPMAYVVRKPGSNITEAQVAPYKKIRRVSFVDAIPKSPAGKILRRELYPRARSRITFFESTSMADRNPNSIAAHFVDPRSGFCSGTKIFHSLRPPLSLPPISQPLSLTEHALSLLQSSPPPANATVLIDSNSGVRLSYAIFLRQIRTLAANLKALTSLSNGQVAFILAPTSLQVPVLYFALLSLGVVLSPANPTGSESEIGHQVRLCKPVIAFATSSTASKLPRLQFGTVLIDSPEFLSMMTEINRSDGRDNGVTDGKIDQSDSAAILYSSGTTGRVKGVLLSHRNLITVNSGPRGLQSEVNGEMEPHPVSLCLLPLFHIFGFVMLIRAISRGETLVLMQRFDFEGMLRAVEKFRVMYIPVSPPLMVAMAKSELVAKYDLSSLQILGCGGAPLGKEVIDKLHEKLPNVEILQGYGLTESTAGAARTLGPEESSNTRSVGRLSESMEAKIVDPASGEALPPGHKGELWLRGPAIMKGYIGDDKATAETLHPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEIIDAAVIPYPDEEAGEIPMAYVVRKPGSNITEAQVAPYKKIRRVSFVKAIPKSPSGKILRRELVKHALSHGSNKL 1111
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 81528263 81559312 - Tan0020510.1 Tan05g2932 754240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2932 1111 ProSitePatterns Putative AMP-binding domain signature. 208 219 IPR020845 -
Tan05g2932 1111 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 544 - GO:0016405(PANTHER)
Tan05g2932 1111 CDD 4CL 38 544 - -
Tan05g2932 1111 FunFam Long-chain-fatty-acid--CoA ligase FadD 591 1012 - -
Tan05g2932 1111 ProSitePatterns Putative AMP-binding domain signature. 764 775 IPR020845 -
Tan05g2932 1111 SUPERFAMILY Acetyl-CoA synthetase-like 62 551 - -
Tan05g2932 1111 CDD 4CL 601 1099 - -
Tan05g2932 1111 MobiDBLite consensus disorder prediction 923 938 - -
Tan05g2932 1111 Pfam AMP-binding enzyme 618 974 IPR000873 -
Tan05g2932 1111 Pfam AMP-binding enzyme 60 419 IPR000873 -
Tan05g2932 1111 SUPERFAMILY Acetyl-CoA synthetase-like 620 1105 - -
Tan05g2932 1111 FunFam Long-chain-fatty-acid--CoA ligase FadD 38 457 - -
Tan05g2932 1111 Gene3D - 593 1012 IPR042099 -
Tan05g2932 1111 Gene3D - 40 457 IPR042099 -
Tan05g2932 1111 Pfam AMP-binding enzyme C-terminal domain 1026 1093 IPR025110 -
Tan05g2932 1111 Pfam AMP-binding enzyme C-terminal domain 471 538 IPR025110 -
Tan05g2932 1111 MobiDBLite consensus disorder prediction 919 938 - -
Tan05g2932 1111 Gene3D - 458 552 IPR045851 -
Tan05g2932 1111 Gene3D - 1013 1105 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5083 Tan-Chr1:116309724 Tan05g2932 Tan-Chr5:81528263 3.40E-132 dispersed
Tan01g5084 Tan-Chr1:116309724 Tan05g2932 Tan-Chr5:81528263 7.00E-110 dispersed
Tan05g2932 Tan-Chr5:81528263 Tan08g1857 Tan-Chr8:70812704 1.50E-102 dispersed
Tan05g2932 Tan-Chr5:81528263 Tan04g2483 Tan-Chr4:83652448 2.50E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2932 K01904 - csv:101213796 880.937