Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g2961 ATGGCGACGACGACCACCAATATTGGCGGCGGCGGCGGCGGTGGGGAGGATAGAGTTATGGCTACGGCTCAGCAGATACTCAAGAGCCTCAACACCCCTAAGGAGGTTCGAGACGACATGCTTTTGATCTTCTCTAGTTTCGACAATCGTCTCTCTAATATCACCAGTTTGGTCAACAGTGGGGATTCGAAGAGGGAGGGGGATCGATTTGAAGCTGCTGAGAAGGTGATTCTTCGTTGGGATTCTGGTCATGGAGCTTCTAGGAACTCCCTTAATTGGGAGGACTCGCCGGATGAGGCAGCGGAGTATTTATCGGCGGTCGATGATATCATTCAGTGGATCGACGACTTGTCAATTCGTTCTGATTCGCCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCGAGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAGTACTGTTCCTCTCGATGCTGAGCATCTCTACGGCTCAATTAGGAGGGTTTCTCTCTCTTTTGCTTCACACGACGGCGAAAATTCCGATGAATTTGAGTCGTTTGCCGATGTTGACCGTGGTTCGGGAATTTTCCATGAGCGTGGTGTCAGTTTGGGCGATGATTTGCGGGTCGATTTGATCCATCCTGATGCTGTTGTTGATTTGAAAGAGATCGCGGACCGGATGATTCGGTCTGGATATGAAAAAGAGTGTGTGAATGTGTATACTAGTGTCCGACGCGATGCTTTAGATGAGTGCTTGGTGGTGCTTGGAGTTGAGAAGCTAAGTATCGAGGATGTTCAGAAAATTGACTGGAAAATTTTGGATGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTTCGAGTACTTTTGACGGGCGAGAAGCGACTGTGTGACTATATCTTTAGTGGGTCTGATGACTCTGAGGAAGTTTGTTTCAATGAGACTGCAAAAGGGTGCATCAGGCAATTACTGAATTTTGCAGAGGCCATTGCTATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTCGCATACGTTTTACCGGACTTGCAGGCTATGGTCACTGATGAATTTGTGATTGAGGAGGCGAAAGGAGTGCTTTCTAGGCTGGGAGAGGCGGCTAAAGGTACATTTGCTGAATTTGAGAATGCTGTTCGAAGTGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGTTATGTCATGAATTACTTAAGATTGCTTGTGGTTTATAGTAAGACTCTGGACGAACTTTTAGAAGGCGACGATGAGGATCATCTAGGGGGTGATGGTGCTGACAATTTGGAGTTAGAAACCATGTCTCCTTTAGCTCGTCGACTGTTTTCATTGATAGCATCACTGGAGTCCAATCTTGAGAGGAAATCCAAACTTTATGGGGATGATTCGATACAATATATATTTCTCATGAATAATATACAATACATTGTGCAGAAAGTGAAAGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGCAAGCGCCGAGGCCAAGTTCGCATATATGCAACAAACTATCTTAGGGCTTCTTGGGGTAAGCTATTGTCTTTCTTGAAGGAAGAAGGGACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTGCTTTAAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAACTCTATAGAATTCAGACAGCTTGGAAGGTTGCAGATCCCCAACTACGAGAAGAGCTTCGAATTTCAATATCGGCAAAGGCGTTACCTGCATATCGTGCCTTCTTGGGAAGACATGGAAGTCAGTTAGAGAATACAAGACATGCTGGGAGGTATATAAAGTACACATCGGATGACTTGGAGAGCTATTTATTGGATTTGTTTGAAGGATCGCCTTGTGTTATACACCACTTACGAAGAAAAAGTAGTTCATAG 1965 45.19 MATTTTNIGGGGGGGEDRVMATAQQILKSLNTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSKREGDRFEAAEKVILRWDSGHGASRNSLNWEDSPDEAAEYLSAVDDIIQWIDDLSIRSDSPEIVDRAENAIQIAMSRLEDEFRHMLIRSTVPLDAEHLYGSIRRVSLSFASHDGENSDEFESFADVDRGSGIFHERGVSLGDDLRVDLIHPDAVVDLKEIADRMIRSGYEKECVNVYTSVRRDALDECLVVLGVEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALAYVLPDLQAMVTDEFVIEEAKGVLSRLGEAAKGTFAEFENAVRSETSKKTMLNAEIHPLTRYVMNYLRLLVVYSKTLDELLEGDDEDHLGGDGADNLELETMSPLARRLFSLIASLESNLERKSKLYGDDSIQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLSFLKEEGTGGSSNSALKLAALKEKFKNFNAGFEELYRIQTAWKVADPQLREELRISISAKALPAYRAFLGRHGSQLENTRHAGRYIKYTSDDLESYLLDLFEGSPCVIHHLRRKSSS 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 81690153 81693514 - Tan0005542.1 Tan05g2961 754269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g2961 654 Pfam Exocyst complex component Exo70 N-terminal 70 150 - -
Tan05g2961 654 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 641 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan05g2961 654 Pfam Exo70 exocyst complex subunit C-terminal 278 636 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan05g2961 654 SUPERFAMILY Cullin repeat-like 69 639 IPR016159 -
Tan05g2961 654 Gene3D Exocyst complex component Exo70 80 644 - -
Tan05g2961 654 FunFam Exocyst subunit Exo70 family protein 86 646 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1831 Tan-Chr4:56552413 Tan05g2961 Tan-Chr5:81690153 3.90E-119 dispersed
Tan05g2961 Tan-Chr5:81690153 Tan11g1421 Tan-Chr11:12798608 5.90E-91 dispersed
Tan02g1722 Tan-Chr2:80573758 Tan05g2961 Tan-Chr5:81690153 4.00E-29 transposed
Tan03g0677 Tan-Chr3:62297719 Tan05g2961 Tan-Chr5:81690153 2.20E-10 transposed
Tan04g2073 Tan-Chr4:74949020 Tan05g2961 Tan-Chr5:81690153 1.60E-43 transposed
Tan04g2865 Tan-Chr4:87956744 Tan05g2961 Tan-Chr5:81690153 6.80E-126 transposed
Tan05g2361 Tan-Chr5:74963276 Tan05g2961 Tan-Chr5:81690153 3.20E-88 transposed
Tan08g2409 Tan-Chr8:75341689 Tan05g2961 Tan-Chr5:81690153 4.80E-114 transposed
Tan05g2961 Tan-Chr5:81690153 Tan09g2370 Tan-Chr9:73415933 6.00E-261 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g2961 K07195 - csv:101212753 1159.44