Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3019 ATGAAACCGGGTGTCTTGTTCTCTGTTCTTGTCCTCATTCTGGCCTCCGCCGTCGTGTCGTCGGCGGACAAAGAGTACGAGGATGACGGCGAAGAATACTCGAGCCTTGATGTTCCGCAGTTGCAGGAGTTTTCAGCTTTCGGCGACTTTCTTTCGTATGGCTTCTACCGGAAAAGTTGTCCCGGCGTCGACGGCATCATTCACCGGAAACTCAAGCAGTGGTTCGATAAAGATAACACCATCGCCGCTAGCATCATCAGACTCCACTTCCACGACTGCGTTGTCAGGGGGTGCGACGGTTCGATTCTTCTGGATTACGAGGGAAGCGAGAGGAGGGCTCCGGCGAGCAAGACGCTGAGGGGTTTCGAAGTGATCGACGACATCAAAGCCGAGTTAGAGAAAAAATGTCCCAAAACAGTTTCTTGTGCAGATATTCTGACCGCCGCCGCCAGAGAAGCCACGGTTCTCGTCGGCGGCCCATATTGGATGGTACCTTATGGAAGAAGAGACGGAGTGGATTCCATTGCCAAAGAAACTGGATTGGTACCAATAGGTGTTGAAGACATCACTTATCTCATTCAACGATACCAATCTCTCGGCTTGAATCTCGTAGATTTGGTCGTTCTTTCAGGCGCGCACACAATTGGAAGAGCAACATGCGGAGCGATACAAAACAGGCTTTATAACAACAGCGGAACGGGGAAACCAGACCCATCACTGAGCCCAAAATACTTAAACTTTTTGAGAAGAAAATGCCGATGGGCCTCCGATTACGTGGATCTTGACGCCACAACGCCCAAGAAATTCGACAACGCCTACTACTCAAATCTCCCCAAAAAGATGGGTCTTTTGTCGACTGATTCAGCTCTGTACACTGACCCAAGAACTTCCCCCATCGTCAAAGCCTTGGCCTATCAGCCTTCCATTTTCCGCCACCAGTTTGCTGTATCCATGGCCAAGCTTGGGAATGTTCAAGTTCTTACCGATCTTTTTGAAGGCCAGATTCGAACCAACTGCAGTTGTAGGAATTATCCTTGA 1038 49.71 MKPGVLFSVLVLILASAVVSSADKEYEDDGEEYSSLDVPQLQEFSAFGDFLSYGFYRKSCPGVDGIIHRKLKQWFDKDNTIAASIIRLHFHDCVVRGCDGSILLDYEGSERRAPASKTLRGFEVIDDIKAELEKKCPKTVSCADILTAAAREATVLVGGPYWMVPYGRRDGVDSIAKETGLVPIGVEDITYLIQRYQSLGLNLVDLVVLSGAHTIGRATCGAIQNRLYNNSGTGKPDPSLSPKYLNFLRRKCRWASDYVDLDATTPKKFDNAYYSNLPKKMGLLSTDSALYTDPRTSPIVKALAYQPSIFRHQFAVSMAKLGNVQVLTDLFEGQIRTNCSCRNYP 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 82086648 82089889 + Tan0020850.1 Tan05g3019 754327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3019 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Tan05g3019 345 Gene3D Peroxidase, domain 2 183 321 - -
Tan05g3019 345 CDD secretory_peroxidase 51 340 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan05g3019 345 Gene3D - 54 343 - -
Tan05g3019 345 ProSiteProfiles Plant heme peroxidase family profile. 50 343 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 60 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 84 104 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 ProSitePatterns Peroxidases active site signature. 82 93 IPR019794 GO:0004601(InterPro)
Tan05g3019 345 FunFam Peroxidase 183 321 - -
Tan05g3019 345 PRINTS Haem peroxidase superfamily signature 158 170 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 FunFam Peroxidase 54 194 - -
Tan05g3019 345 PANTHER PEROXIDASE 25-RELATED 44 339 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan05g3019 345 Pfam Peroxidase 69 304 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan05g3019 345 SUPERFAMILY Heme-dependent peroxidases 51 343 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0571 Tan-Chr5:4079061 Tan05g3019 Tan-Chr5:82086648 2.70E-103 dispersed
Tan05g3019 Tan-Chr5:82086648 Tan06g0684 Tan-Chr6:5180942 4.50E-66 dispersed
Tan05g3019 Tan-Chr5:82086648 Tan01g1261 Tan-Chr1:12218506 2.40E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3019 K00430 - csv:101208042 605.905