Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3029 ATGGCTCCGACAGAGATGAAACCGAAACCGCTTTATTTGCAATTTCTTACGCTTCTGGTGTCAATTTGGGTGTCCAGAATAGGCGCCTCGGACACTATGATGTTCAACGAGTCAGTAAGTGGGCATTCGGTTGTTTCCAGAAATGAAAACCCAAAAGGACGGTGCCCTCATGGTTGGTTTACTAGCCCGAACAAGACTAAGTGCTATGTTTTCATGTCGATCCCTAAATCATGGAATGAATCGGAGAGCCAATGTAATGGTTATGGCGGGAACTTAGCAGCACTGGTAACGTATCAAGAGTTTAGCTTCGCACAAAATCTGTGTAATGGAACTCTTGGTGGCTGTTGGGTTGGTGGTAGAGCGTTCAACTCTTCGAATGATTTTGTTTGGAAGTGGTCAGATAATGTTTCAATATGGAATGATTCCATTATTCCCAGCACAGCTCTGCAATCTAATTGCAAAAACGTTTCCTGCCGCACCAATGATTCGGTTGAAACATGTACTTTGATATTTGGTGGACGTGGAGCAACAACACCGTTCCTTAAGGATGAGAAATGCAACAGTTCTCATCCTTTTATATGCATGATAAATCTAGATGATAGATGCCATCGAATGCACTGCCACAAAGAGTATCTGGTCATTTTAGCTGTGGTGAGTGGGTTGATATTTTGCACGACGTTGGCTGTGGTGATTTGGCTTCTTGCCTACAAGAGGAGCAAAAAGCGGAGAAGGTCTCGGAAGCCATCCAATCCTGCAGCTTCTGCATTGGTACCACCTTCATGGAAGGTGTTTACCAAAGAAGAGCTAAGATCGATTACAAAAAACTTCAGCGAGGGAAATCGTCTTCTTGGAGATACAAAAACAGGTGGTACATACAGTGGGCTTTTACCTGATGGCTCAAGAGTTGCAATTAAGAGGTTAAAGAAGTCCAGTTTTCAGAGGAAAAAGGAGTTCCATTCTGAAATTGCAAGAGTTGCTAAACTTCGTCATCCAAATTTGGTTGCCCTGAAAGGATGCTGCTATGACCATGGTGACCGTTACATTGTTTATGAATTCATTGTTAATGGGCCCTTAGATAGATGGCTTCACCATGTTCCAAGAGGTGGTCGAAGCTTAGATTGGACGATGAGAATAAAAGTTGCCACGACTCTTGCTCAAGGGATTGCGTTCCTTCACGACAAGGTTAAGCCACACGTGGTACATCGTGATATTCGTGCTAGTAATGTACTTCTTGATGAAGAATTTGGAGCACATCTGATGGGAGTTGGCCTGTCGAAATTGGTGGCATATGAAGTGATGCATGAGAGGACAGTGATGGCAGGTGGAACCTATGGATATCTTGCTCCCGAGTTTGTCTACAGAAATGAGCTTACAACAAAGAGTGATGTCTATAGTTTTGGAGTGCTGCTGCTTGAAATTGTGACCGGTCGAAGGCCTGCACAGGCAGTTGATTCTGTTGGTTGGCAGAGCATTTTCGAATGGGCAACGCCCCTCGTGCAGGCTCACCGTTACCTAGATCTCTTGGATCCTCACATAACAGCCACCTCTACTTCTGAAATTCCGGAGGCTGGTGTTGTTCAGAAGGTGGTTGACCTTGTGTATGCTTGCACACAGCATGTCCCATCGATGCGCCCTAGAATGTCGCATGTTGTTCATCAGTTGCAACAATTGGCTCCCTCACCTCTCACTATGAAGTAA 1698 44.76 MAPTEMKPKPLYLQFLTLLVSIWVSRIGASDTMMFNESVSGHSVVSRNENPKGRCPHGWFTSPNKTKCYVFMSIPKSWNESESQCNGYGGNLAALVTYQEFSFAQNLCNGTLGGCWVGGRAFNSSNDFVWKWSDNVSIWNDSIIPSTALQSNCKNVSCRTNDSVETCTLIFGGRGATTPFLKDEKCNSSHPFICMINLDDRCHRMHCHKEYLVILAVVSGLIFCTTLAVVIWLLAYKRSKKRRRSRKPSNPAASALVPPSWKVFTKEELRSITKNFSEGNRLLGDTKTGGTYSGLLPDGSRVAIKRLKKSSFQRKKEFHSEIARVAKLRHPNLVALKGCCYDHGDRYIVYEFIVNGPLDRWLHHVPRGGRSLDWTMRIKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKLVAYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVTGRRPAQAVDSVGWQSIFEWATPLVQAHRYLDLLDPHITATSTSEIPEAGVVQKVVDLVYACTQHVPSMRPRMSHVVHQLQQLAPSPLTMK 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 82214915 82218533 + Tan0022597.1 Tan05g3029 754337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3029 565 SUPERFAMILY C-type lectin-like 43 198 IPR016187 -
Tan05g3029 565 SUPERFAMILY Protein kinase-like (PK-like) 250 554 IPR011009 -
Tan05g3029 565 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 353 565 - -
Tan05g3029 565 Pfam Lectin C-type domain 75 195 IPR001304 -
Tan05g3029 565 SMART CLECT_2 55 195 IPR001304 -
Tan05g3029 565 SMART tyrkin_6 280 554 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Tan05g3029 565 ProSiteProfiles Protein kinase domain profile. 277 555 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3029 565 Gene3D Transferase(Phosphotransferase) domain 1 353 559 - -
Tan05g3029 565 CDD CLECT 67 194 - -
Tan05g3029 565 Pfam Protein tyrosine and serine/threonine kinase 282 554 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3029 565 Gene3D - 36 198 IPR016186 -
Tan05g3029 565 ProSitePatterns Tyrosine protein kinases specific active-site signature. 399 411 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3029 565 PANTHER OS01G0750732 PROTEIN 164 557 IPR050885 -
Tan05g3029 565 Gene3D Phosphorylase Kinase; domain 1 254 352 - -
Tan05g3029 565 FunFam C-type lectin receptor-like tyrosine-protein kinase 254 352 - -
Tan05g3029 565 ProSiteProfiles C-type lectin domain profile. 64 195 IPR001304 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3029 Tan-Chr5:82214915 Tan04g2560 Tan-Chr4:84550708 5.00E-54 dispersed
Tan05g3029 Tan-Chr5:82214915 Tan05g3030 Tan-Chr5:82214915 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67682 PF07714 PK_Tyr_Ser-Thr 2.50E-40 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3029 - - - 0.0