Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3130 ATGGCAGCACTCAATTTTCTTACAACCCTCATTCTCTTCAGTTTCATTATCCATGGAAACGCTCAGACTTCAGTTGTATACCCATATCGTAGTTGCTTACCCGGCAATTTCACCCAGAACAGCACTTACCAGTCCAACCTCAATCTTCTCTTTTCAAATCTCTCCACCAACGCCCCCGGAATCCATGGATTCTTCAATACTTCCGTCGGCCGACCACCAAACGACACCGTTTACGGTCTCTTCCAGTGCCGTGGAGATGTCACCAACAGCACCTGTCGAACTTGTTTGACCACCGCTACTAGAGACATAGCCCGGCTGTACTGTCCCCTGAGTAAAGGCGCTGTGATTTGGTACGACGAATGCATACTCCGCTATTCCGATCAATCTTTCTCTTCCGTCATCTCCACAGAGCCAAGTTTGAAATTACTGAATACGGCTGATATAGAAACTGACAAGGCTCGATTCAACCAATTAGTGATGTCCACATTGAGGGCCACCGCGGCCAGCGCCTCTTCAGTGGGCGAATTGTTTGCAACCCAAGAGGCTAATTTCACATCAGATCTAACGCTTTACACATTAGCACAGTGTACCGGCGATTTGTCCAATTCGGATTGTGAAGAATGCTTAAGACAAGCTACCAATAATATTCCGAGTTGTTGCACTAATAAAAAAGGTGGGAGAGTTTTGTTTCCCAGCTGTTACGTTCGTTACGAAACTTACATGTTTTATAACTTCAATCCGGTGCCGCCTCCAGCTACCCCACCACTGCCGCTGCCTCCTCCTCCTCCTCCGCCAGGGGAAAACAGAGCCTCGACAACGACGGTGATAATTGTGGCAATTGTGGTTCCAATTAGTGTCTGCACTCTGCTTTTTGTGGGCTGCTGTTTCTTGCGCCGAAGAGCAAAGACGAGGAAATACACAGCTGCGAATGAAGATAGTGTTGTTAATGAGATAACCACGGTGGAATCTCTGCAATTTGATTTTAATACAATTGATGCTGCTACTAACAAATTCTCAATGGACAACAAATTGGGTGAGGGTGGATTTGGTGCAGTCTACAAGGGTATACTTGATAATGGACAAGAAATAGCAGTGAAAAGATTATCGAGTAGATCTTTGCAAGGTTCTGAAGAGTTCAAGAATGAAGTCATGTTGGTTGCTAAACTTCAACATAGAAATCTTGTAAGGCTATTGGGATTCTGCTTGGAGGGTGGAGAAAAGATACTCATCTATGAATACATTCCCAATAAAAGCCTCGACTATTTCCTATTTGATCCTAACCGACAAAAAGAGTTGGATTGGTCAACACGATATAAGATCATCAATGGAATTGCTCGAGGAATGTTATATCTACATGAAGATTCCCGACTTCGAATTATTCATCGCGATCTTAAAGCGAGCAATGTCTTGCTAGATGAAGATATGAATGCAAAAATTTCAGACTTTGGAATGGCGAGGATTATCCAATTAGATCAAACTCAAGAAAATACAAATAGAATTGTTGGTACCTACGGTTACATGTCTCCTGAATATGCAATGCATGGGAACTTTTCTATAAAATCTGATGTATATAGCTTTGGAGTCTTAATCTTGGAAATGATAAGTGGCAAGAAAAATAGTACATTTTACCTGACGGATCTTGCTCAAGACATGTTAACCTATGCTTGGAAACTCTGGAAGGACGAAACACCATTAGAGTTATTGGATCCGAGTTTGAGAAACAGTTACTCAAGAAACGAGGTGCTTAGATGCATCCATATTGCTTTGTTATGTGTTCAAGAGGATTCTAGGAGAAGACCCTCTATGGCATCAATTATTCTAATGCTTAGTAGTTATTCAGTTACTTTGTCATTGCCGGAAGAACCAACATCTTTCATGGGTAGTAAATACGTTGACATTATTATAGATAGTGATCAATCTACCAGCAGGTCTATCAAGTGGTCTACTAATGAAGCATCCATATCTGAGTTGCATCCACGATGA 1983 42.11 MAALNFLTTLILFSFIIHGNAQTSVVYPYRSCLPGNFTQNSTYQSNLNLLFSNLSTNAPGIHGFFNTSVGRPPNDTVYGLFQCRGDVTNSTCRTCLTTATRDIARLYCPLSKGAVIWYDECILRYSDQSFSSVISTEPSLKLLNTADIETDKARFNQLVMSTLRATAASASSVGELFATQEANFTSDLTLYTLAQCTGDLSNSDCEECLRQATNNIPSCCTNKKGGRVLFPSCYVRYETYMFYNFNPVPPPATPPLPLPPPPPPPGENRASTTTVIIVAIVVPISVCTLLFVGCCFLRRRAKTRKYTAANEDSVVNEITTVESLQFDFNTIDAATNKFSMDNKLGEGGFGAVYKGILDNGQEIAVKRLSSRSLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGGEKILIYEYIPNKSLDYFLFDPNRQKELDWSTRYKIINGIARGMLYLHEDSRLRIIHRDLKASNVLLDEDMNAKISDFGMARIIQLDQTQENTNRIVGTYGYMSPEYAMHGNFSIKSDVYSFGVLILEMISGKKNSTFYLTDLAQDMLTYAWKLWKDETPLELLDPSLRNSYSRNEVLRCIHIALLCVQEDSRRRPSMASIILMLSSYSVTLSLPEEPTSFMGSKYVDIIIDSDQSTSRSIKWSTNEASISELHPR 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83411324 83415412 + Tan0014606.1 Tan05g3130 754438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3130 660 ProSiteProfiles Gnk2-homologous domain profile. 136 242 IPR002902 -
Tan05g3130 660 FunFam Cysteine-rich receptor-like protein kinase 25 138 242 - -
Tan05g3130 660 SMART serkin_6 338 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3130 660 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524(InterPro)
Tan05g3130 660 ProSiteProfiles Gnk2-homologous domain profile. 25 130 IPR002902 -
Tan05g3130 660 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3130 660 FunFam Cysteine-rich receptor-like protein kinase 10 299 413 - -
Tan05g3130 660 CDD STKc_IRAK 344 609 - -
Tan05g3130 660 Pfam Protein tyrosine and serine/threonine kinase 339 606 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3130 660 Pfam Salt stress response/antifungal 35 128 IPR002902 -
Tan05g3130 660 Pfam Salt stress response/antifungal 150 240 IPR002902 -
Tan05g3130 660 FunFam cysteine-rich receptor-like protein kinase 10 414 616 - -
Tan05g3130 660 Gene3D Phosphorylase Kinase; domain 1 299 413 - -
Tan05g3130 660 Gene3D Transferase(Phosphotransferase) domain 1 414 619 - -
Tan05g3130 660 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 132 624 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3130 660 SUPERFAMILY Protein kinase-like (PK-like) 323 638 IPR011009 -
Tan05g3130 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3130 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 130 - -
Tan05g3130 660 Gene3D - 24 130 IPR038408 -
Tan05g3130 660 Gene3D - 139 242 IPR038408 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0307 Tan-Chr2:2581947 Tan05g3130 Tan-Chr5:83411324 1.00E-35 dispersed
Tan05g3130 Tan-Chr5:83411324 Tan05g3149 Tan-Chr5:83487339 6.40E-303 dispersed
Tan06g2369 Tan-Chr6:75759741 Tan05g3130 Tan-Chr5:83411324 2.50E-17 dispersed
Tan07g1380 Tan-Chr7:64349159 Tan05g3130 Tan-Chr5:83411324 4.90E-93 dispersed
Tan09g1798 Tan-Chr9:69441044 Tan05g3130 Tan-Chr5:83411324 4.20E-15 dispersed
Tan05g3130 Tan-Chr5:83411324 Tan05g3131 Tan-Chr5:83423345 2.50E-251 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67685 PF07714 PK_Tyr_Ser-Thr 6.30E-52 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3130 - - - 0.0