Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3131 ATGGCTGCAACAAGGCCGAGTGCGATCTTTGACATGCTCGAAGTTCCAATTTTTCTCTTCCTCCTTAGTTGCTTTAACAATGGAAACGCTCAGACTATAATTGAATTGCCATATCGCAGTTGCTTGGGCGCCAATTTCACCCCGAAAAGTACCTATCAGTCAAACCTTAATTCCCTCTTCACAAATCTGTCCGTCGCCGCCCCCGCTACTAGATTCTACAATACTTCCATCGGCCAAACAATAAACGACACCGCTTACGGTCTCTTCCAGTGCCAAGGAGATGTCGCCCACGAGAACTGTCGAGCTTGCGTGGCCGAAGCAACCAGAGACACGGCCCAGCAGTACTGTTCCCTCAGGAAAAGCGCTGTGGCTTGGTACGATGAATGCATATTGCGTTATTCCGACCAATCTTTCTTTTCTGTCGTGTCTACAATGCCAGGTCTGATGTTCCCAAAGAAGGAAGATATAGGCGTTGACGCGGCTCGATTCAACCAACTAGTCATCTCCACATTGAAGCTCACTGCGGCTTGGGCAGCCAACGCCACTTCGCTGGGCCAATTGTTTGCAACCCAGGACGCCAATTTTACATCTAATTTAACACTTTACACCTTAGCACAGTGCACCCGCGATTTGTCCAATTTCGATTGCCTCAAATGCTTAACACAATCTATCGGTCATATTCCGGATTGTTGCACTAATAAACAAGGTGGGAGAGTTTTGTTTCCCAGCTGTTATGTTCGTTACGAAATTTATCCCTTTTATGACCCGGATCCGGTGCTGACTCCAGGAATCTTGGAGCGAGGGGAAAATAGATCTTCAGCGGGAAAAAACAGATCCTCGACGGCGACAATTGTGGCAATTGTGGTACCAATTTCTTTCTCCATATTGCTTTTTCTGGGCTGGTGTTTCCTGCGCCGAAGACCAAAGACCAAGAAATACACTGCGAAGGAAGACGACGTCGGTGAGATGACCAATGTGGAATCTCTGCAATTTGATTTCGACACAATTGATGCTGCTACTAACAAATTCTCAGTGGAAAACAAGTTGGGTGAAGGTGGATTTGGTCCAGTCTACAAGGGTAAACTGGATGATGGACAAGAGATAGCAGTGAAGAGATTATCAAGAAGATCTTCGCAAGGTGCTGAAGAGTTCAAGAATGAGGTCATGTTGGTTGCTAAGCTTCAACATAGAAATTTAGTAAGGCTATTGGGATTTTGCTTGGAGGGTGAAGAAAAGATACTCGTCTATGAATATATTCCTAACAAAAGTCTCGACTATTTCCTATTTGATCCTCAAGGACAAAGAGAGTTGGATTGGTCTAGACGATATAAAATCATCAATGGAATTGCTCGAGGAGTTTTATATCTACATGAAGATTCCCGACTTCGAATTATTCATCGTGATCTTAAAGCTAGCAACGTCTTATTAGATGGGAATATAGATCCAAAAATTTCAGACTTCGGTATGGCAAGAATTATCCAAGTGGATCAAACTCAAGGAAATACTAGACGAATTGTTGGTACCTATGGCTACATGTCTCCGGAATATGCAATGCATGGAAACTTCTCAACAAAATCTGATGTGTATAGCTACGGAGTCTTAGTTTTGGAGATTATCAGTGGAAAGAAAAATAACACTTTTTATCTATCAGAACTTGCCCAAGACATCTTAAACTACGCTTGGAAACTATGGAAGAATGGAACAACACTCGAATTGTTGGACTCAAGCCTGAGAGACATTTACTCAAGAAATGAGGTGCTTAGATGTATTCATATTGCTTTACTATGTGTTCAAGAGGATCCTGTTCTTAGACCCTCCATGGCATCCGTTGTTCTTATGTTGAATAGTTATTCTATTCCTTTGCCTTTACCTAAAGAGCCAGCATTTCTTGTTCGAAGTGCGAATAATAGCATTATAACAAGTCATGATGATTCTACAAATAGGTACTTATTGTGGTCCGACAATGAAATATCTATTTCTGAGTTGCACCCTCGATGA 1998 42.54 MAATRPSAIFDMLEVPIFLFLLSCFNNGNAQTIIELPYRSCLGANFTPKSTYQSNLNSLFTNLSVAAPATRFYNTSIGQTINDTAYGLFQCQGDVAHENCRACVAEATRDTAQQYCSLRKSAVAWYDECILRYSDQSFFSVVSTMPGLMFPKKEDIGVDAARFNQLVISTLKLTAAWAANATSLGQLFATQDANFTSNLTLYTLAQCTRDLSNFDCLKCLTQSIGHIPDCCTNKQGGRVLFPSCYVRYEIYPFYDPDPVLTPGILERGENRSSAGKNRSSTATIVAIVVPISFSILLFLGWCFLRRRPKTKKYTAKEDDVGEMTNVESLQFDFDTIDAATNKFSVENKLGEGGFGPVYKGKLDDGQEIAVKRLSRRSSQGAEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKILVYEYIPNKSLDYFLFDPQGQRELDWSRRYKIINGIARGVLYLHEDSRLRIIHRDLKASNVLLDGNIDPKISDFGMARIIQVDQTQGNTRRIVGTYGYMSPEYAMHGNFSTKSDVYSYGVLVLEIISGKKNNTFYLSELAQDILNYAWKLWKNGTTLELLDSSLRDIYSRNEVLRCIHIALLCVQEDPVLRPSMASVVLMLNSYSIPLPLPKEPAFLVRSANNSIITSHDDSTNRYLLWSDNEISISELHPR 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83423345 83427274 + Tan0017550.1 Tan05g3131 754439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3131 665 FunFam Cysteine-rich receptor-like protein kinase 10 305 418 - -
Tan05g3131 665 FunFam cysteine-rich receptor-like protein kinase 10 419 621 - -
Tan05g3131 665 Pfam Salt stress response/antifungal 186 250 IPR002902 -
Tan05g3131 665 Pfam Salt stress response/antifungal 44 136 IPR002902 -
Tan05g3131 665 ProSiteProfiles Gnk2-homologous domain profile. 144 253 IPR002902 -
Tan05g3131 665 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Tan05g3131 665 FunFam Cysteine-rich receptor-like protein kinase 10 149 253 - -
Tan05g3131 665 CDD STKc_IRAK 349 615 - -
Tan05g3131 665 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 84 629 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3131 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3131 665 Pfam Protein tyrosine and serine/threonine kinase 345 611 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3131 665 SUPERFAMILY Protein kinase-like (PK-like) 328 646 IPR011009 -
Tan05g3131 665 ProSiteProfiles Protein kinase domain profile. 343 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3131 665 SMART serkin_6 343 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3131 665 Gene3D - 34 138 IPR038408 -
Tan05g3131 665 Gene3D - 156 253 IPR038408 -
Tan05g3131 665 Gene3D Transferase(Phosphotransferase) domain 1 419 619 - -
Tan05g3131 665 Gene3D Phosphorylase Kinase; domain 1 306 418 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2372 Tan-Chr3:77542950 Tan05g3131 Tan-Chr5:83423345 1.10E-108 dispersed
Tan03g2373 Tan-Chr3:77547937 Tan05g3131 Tan-Chr5:83423345 5.40E-137 dispersed
Tan04g1539 Tan-Chr4:23105105 Tan05g3131 Tan-Chr5:83423345 4.60E-89 dispersed
Tan05g3131 Tan-Chr5:83423345 Tan05g3149 Tan-Chr5:83487339 1.50E-267 dispersed
Tan09g1760 Tan-Chr9:69133213 Tan05g3131 Tan-Chr5:83423345 6.60E-81 dispersed
Tan05g3130 Tan-Chr5:83411324 Tan05g3131 Tan-Chr5:83423345 2.50E-251 tandem
Tan05g3131 Tan-Chr5:83423345 Tan05g3132 Tan-Chr5:83440176 6.00E-285 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67686 PF07714 PK_Tyr_Ser-Thr 9.40E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3131 - - - 0.0