Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3132 ATGGGTGCAATAAGGTTGGGCATGTTCAAAGTTGGTATTTTTCTCCTTCTCTTTATTTGCGTTGTCGAAGGAAAGATTCAGACTGTAATTGAATGGCCATATTGCAATTGCTTGGAGGCGAATTTCACCCCGAAAAGTACGTATCAGTCCAATCTTAATCTCCTCTTCAAAAATCTTTCCAACGTTGCCATCACTGGTAGATTCTACAGTACTTCCATTGGCCAAACGCCAAACGACACCGTTTACGGCCTCTTCCAGTGCCAGGGGAACGTTCTGTATGAGAACTGTCGAGCTTGCGTGGCCGAAGCCACCAGAGACACGGCCCAGCGGTGCTGTTCCTTCAAGAAAGGAGCTCTGGCTTGGTGCGATGAGTGCATACTCCGTTATTCCGACCAACCTTTCTTTTCTGTCGTGTCAACAACGCCACAGCTGTTGTTACCAACCGAGGATGATATTGGCGTCGACGCGCCTCGATTCAACCAACTAGTCATCTCCACACTGAGGCTCACTGTGGCTCGAGCGGCAAACGCCACTTCGGTGGGCCAATTGTTTGCAATCCATGATGCCAATTTCACATCTAATATAACACTTTACACCTTAGCACAGTGCACCGGAGATTTGTCCAATTTGGATTGCCTAAAATGCTTGACATTAGCTCTCGATTTTATTCCGGATTGTTGCACTAATAAACAAGGTGGGAGAGTTTTCTTTCCCAGCTGTTTTGTTCGTTATGAAATTTATCCGTTTAACGAACCGAATCCGGTGCTGACTCCACAAATCCCGGAGCCAGTTGTGGGTGAGATGACCAATGTGGAATCTCTGCAATTTGATTTCGACACAATAGATGCTGCTACTAACAAATTCTCAGAGGAAAACAAGTTGGGAGAAGGTGGATTTGGTGCAGTCTACAAGGGTAAACTGGATGATGGACAAGAGATAGCAGTCAAGAGATTATCAAGAACATCTTTGCAAGGTGCTGAAGAGTTCAAGAATGAGGTCATGTTGGTTGCTAAGCTTCAACATAGAAATCTTGTAAGGCTATTGGGATTTTGCTTGGAGAGTGAAGAAAAGATACTCGTCTATGAATATATCCCTAACAAAAGTCTCGACTATTTCCTATTTGATCCTCAGGGACAAAGAGAGTTGGATTGGTCTAGACGATATAAGATCATCAATGGAATTGCTCGAGGAGTTTTATATCTACATGAAGATTCCAGACTTCGAATTATTCATCGTGACCTTAAAGCTAGCAATGTTTTATTAGATGGGAATATGGATCCAAAAATTTCAGATTTCGGCATGGCAAGAATTATCCAAATGGATCAAACTCAAGGAAATACTAATCGAATTGTTGGTACCTACGGTTATATGTCTCCTGAATATGCAATGCATGGAAACTTCTCAACGAAATCTGACGTGTATAGCTACGGAGTCTTACTTTTGGAGATTATTAGTGGAAAGAAAAATAACACTCTTTATCTATCAGATTTGTCCCAAGACATTTTAAAATACGCTTGGAATCTATGGAAGAATGGAACAACACTTGAATTGTTGGACTCAAGTTTGAGAGACATTTACTCAAGAAATGAGGTGCTTAGATGTATTCATATTGCTTTACTATGTGTTCAAGAGGATCCTACTCGTAGACCCTCTATGGCATCCATCGTTCTTATGCTGAATAGTTATTCTATTCCTTTGCCTTCACCTAAAGAGCCAACATTCCTCGCCCGCAATGCGAATAATGGCATTATAACAAATCAAAACCATTCTGCAAATGGGGCGTGTTTATTGTGGTCCAACAATGAAATGTCTATTTCTGAGTTGCACCCGCGATGA 1836 41.88 MGAIRLGMFKVGIFLLLFICVVEGKIQTVIEWPYCNCLEANFTPKSTYQSNLNLLFKNLSNVAITGRFYSTSIGQTPNDTVYGLFQCQGNVLYENCRACVAEATRDTAQRCCSFKKGALAWCDECILRYSDQPFFSVVSTTPQLLLPTEDDIGVDAPRFNQLVISTLRLTVARAANATSVGQLFAIHDANFTSNITLYTLAQCTGDLSNLDCLKCLTLALDFIPDCCTNKQGGRVFFPSCFVRYEIYPFNEPNPVLTPQIPEPVVGEMTNVESLQFDFDTIDAATNKFSEENKLGEGGFGAVYKGKLDDGQEIAVKRLSRTSLQGAEEFKNEVMLVAKLQHRNLVRLLGFCLESEEKILVYEYIPNKSLDYFLFDPQGQRELDWSRRYKIINGIARGVLYLHEDSRLRIIHRDLKASNVLLDGNMDPKISDFGMARIIQMDQTQGNTNRIVGTYGYMSPEYAMHGNFSTKSDVYSYGVLLLEIISGKKNNTLYLSDLSQDILKYAWNLWKNGTTLELLDSSLRDIYSRNEVLRCIHIALLCVQEDPTRRPSMASIVLMLNSYSIPLPSPKEPTFLARNANNGIITNQNHSANGACLLWSNNEMSISELHPR 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83440176 83443029 + Tan0014391.1 Tan05g3132 754440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3132 611 FunFam Cysteine-rich receptor-like protein kinase 10 145 249 - -
Tan05g3132 611 CDD STKc_IRAK 294 560 - -
Tan05g3132 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3132 611 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524(InterPro)
Tan05g3132 611 Gene3D Transferase(Phosphotransferase) domain 1 364 565 - -
Tan05g3132 611 Gene3D Phosphorylase Kinase; domain 1 261 363 - -
Tan05g3132 611 ProSiteProfiles Protein kinase domain profile. 288 574 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3132 611 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 124 574 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3132 611 SUPERFAMILY Protein kinase-like (PK-like) 273 586 IPR011009 -
Tan05g3132 611 SMART serkin_6 288 563 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3132 611 ProSiteProfiles Gnk2-homologous domain profile. 140 249 IPR002902 -
Tan05g3132 611 FunFam cysteine-rich receptor-like protein kinase 10 364 566 - -
Tan05g3132 611 Pfam Protein tyrosine and serine/threonine kinase 291 557 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3132 611 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Tan05g3132 611 Gene3D - 30 134 IPR038408 -
Tan05g3132 611 Gene3D - 154 249 IPR038408 -
Tan05g3132 611 Pfam Salt stress response/antifungal 35 132 IPR002902 -
Tan05g3132 611 Pfam Salt stress response/antifungal 184 246 IPR002902 -
Tan05g3132 611 FunFam Cysteine-rich receptor-like protein kinase 10 259 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3132 Tan-Chr5:83440176 Tan05g3149 Tan-Chr5:83487339 1.40E-240 dispersed
Tan05g3131 Tan-Chr5:83423345 Tan05g3132 Tan-Chr5:83440176 6.00E-285 tandem
Tan05g3132 Tan-Chr5:83440176 Tan05g3133 Tan-Chr5:83459541 4.70E-167 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67687 PF07714 PK_Tyr_Ser-Thr 7.20E-51 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3132 - - - 0.0