Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3144 ATGGCCGCTACGAGTGCGAAACTGAATTACTTCTTTAACATGCTCAATCCTCTTACTTTCCTCTTCCTCCTCAGTTTCGTTATCCATGGAAACTCCCAGACCCCAGTTTCTTACCCGTATCGCGCTTGCTTACCCGACAATTTCACCCAGAATAGCACCTATCAGTCCAACCTTAATCTTCTCTTTTCAACTCTCTCCGCCAACGGCCCCGAAAGAAATAGATTCTTCAATACTTCCATCGGCCGACCACCAAACGACACCGTTTACGGTCTCTTCCAGTGCCGTGGAGATGTCACCAACAGCCCCTGTCGAACTTGTTTGACCATCGCTACTAGAGACATAGCCCGGCTTTACTGTCCCCTGAGTAAAGGCGCTGTGATTTGGTACGACGAATGCATACTCCGCTATTCCGATCAATCTTTCTCTTCCGTCATCTCCACAGAGCCAAGTTTGAAATTACTGAATACGGCTGATATAGAAACTGACAAGGCTCGATTCAACCAATTAGTGATGTCAACATTGAGGGCCACCGCGGCTCGAGCGGCCAACGCCTCTTCGGTTGGCGAATTGTTTGCAACCCAGGAGGCTAATTTCACATCAGATCTGACGCTCTACACATTAGCTCACTGTACCGGCGATTTGTCCAATTCGGATTGTGAAGAATGCTTGAGACAAGCTACCAATGATATTCCGAGTTGTTGCACTAATAAAAGAGGTGGGAGAGTTTTGTTTCCAAGCTGTTACGTTCGTTACGAAATTTATATGTTTTATGACTTCACGGAGACGAATCCGGCGCCGCCTCCTCCTCCTCCAGGGGAAAACAGAGCCTCAACGGTGATGATTGTGGTTTCATTTACTGTCTCCATTCTGTTTTTTGTGGGCTGTTGTTTCTTGCGCCAAAGAGCAAACATGAGGAAATATGCATTAGTGAATGAAGATAGTGTTTTTTATGAGATGGCCACTGTGGAATCTATACAATTTAATTTCAATACAATAGATGCTGCTACTAACAAATTCTCAGTGGAAAACAAGTTGGGTGAAGGTGGATTTGGTCCAGTCTACAAGGGTACACTTGATAATGGACAAGAGATAGCAGTGAAAAGATTATCCAGTACATCTGTGCAAGGTTCTGAAGAGTTCAAGAATGAGGCTATGTTGGTTGCTAAGCTTCAACATAGAAATTTAGTAAGGCTATTGGGATTCTGCTTGGAGGGCGGAGAAAAGATACTTGTCTATGAATACATTTCAAACAAAAGCCTTGACTATTTCTTATTTGATCCTATAAGACAAAGAGAGTTGGATTGGACAATGCGATATAACATCATCAATGGAATTGCTCGAGGAATGTTATATCTTCATGAAGATTCGCAACTTCGAATTATTCATCGTGATCTTAAAGCCAGTAACATCTTGTTAGATAGAGATATGAATCCAAAAATTTCAGACTTTGGTATGGCAAGAATTATCCAATTAGATCAAACTCAAGGAAATACAAGTAAAATTGTTGGTACCTACGGTTACATGTCTCCTGAATATGCAATGCATGGAAACTTTTCTCTAAAATCTGATGTATATAGTTTTGGAGTTTTAATCTTGGAGATTATAAGTGGCAAGAAAAACAATACATTTTACTTGTCAGATCGTATTGAAGACATGTTAACCTATGCTTGGAAAATTTGGAAGGCCGAAACACCATTCGAGTTATTGGATCCAAGTTTGAGAGATAATTACTCAAGAAATGAGGTGCTTAGATGCATCCATATTGCTTTGTTATGTGTTCAAGAGGATTCAGGGAGAAGACCCTCCATGGCATCTATCATTCTAATGCTTAATAGTTATTCGGTCACTTTGTCATTGCCGATGGAAAGAACCAACGTCTTTCATGGGCAGTAG 1893 41.42 MAATSAKLNYFFNMLNPLTFLFLLSFVIHGNSQTPVSYPYRACLPDNFTQNSTYQSNLNLLFSTLSANGPERNRFFNTSIGRPPNDTVYGLFQCRGDVTNSPCRTCLTIATRDIARLYCPLSKGAVIWYDECILRYSDQSFSSVISTEPSLKLLNTADIETDKARFNQLVMSTLRATAARAANASSVGELFATQEANFTSDLTLYTLAHCTGDLSNSDCEECLRQATNDIPSCCTNKRGGRVLFPSCYVRYEIYMFYDFTETNPAPPPPPPGENRASTVMIVVSFTVSILFFVGCCFLRQRANMRKYALVNEDSVFYEMATVESIQFNFNTIDAATNKFSVENKLGEGGFGPVYKGTLDNGQEIAVKRLSSTSVQGSEEFKNEAMLVAKLQHRNLVRLLGFCLEGGEKILVYEYISNKSLDYFLFDPIRQRELDWTMRYNIINGIARGMLYLHEDSQLRIIHRDLKASNILLDRDMNPKISDFGMARIIQLDQTQGNTSKIVGTYGYMSPEYAMHGNFSLKSDVYSFGVLILEIISGKKNNTFYLSDRIEDMLTYAWKIWKAETPFELLDPSLRDNYSRNEVLRCIHIALLCVQEDSGRRPSMASIILMLNSYSVTLSLPMERTNVFHGQ 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83459541 83463159 + Tan0015052.12 Tan05g3144 754452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3144 630 ProSiteProfiles Protein kinase domain profile. 339 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3144 630 CDD STKc_IRAK 345 611 - -
Tan05g3144 630 FunFam Cysteine-rich receptor-like protein kinase 10 150 256 - -
Tan05g3144 630 SMART serkin_6 339 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3144 630 Gene3D Phosphorylase Kinase; domain 1 300 414 - -
Tan05g3144 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3144 630 SUPERFAMILY Protein kinase-like (PK-like) 325 620 IPR011009 -
Tan05g3144 630 Gene3D - 36 141 IPR038408 -
Tan05g3144 630 Gene3D - 150 256 IPR038408 -
Tan05g3144 630 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Tan05g3144 630 Gene3D Transferase(Phosphotransferase) domain 1 415 621 - -
Tan05g3144 630 ProSiteProfiles Gnk2-homologous domain profile. 147 256 IPR002902 -
Tan05g3144 630 Pfam Salt stress response/antifungal 161 253 IPR002902 -
Tan05g3144 630 Pfam Salt stress response/antifungal 46 139 IPR002902 -
Tan05g3144 630 FunFam cysteine-rich receptor-like protein kinase 10 415 617 - -
Tan05g3144 630 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 147 621 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3144 630 FunFam Cysteine-rich receptor-like protein kinase 10 300 414 - -
Tan05g3144 630 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 36 141 - -
Tan05g3144 630 Pfam Protein tyrosine and serine/threonine kinase 341 607 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1269 Tan-Chr4:12200508 Tan05g3144 Tan-Chr5:83459541 2.50E-86 dispersed
Tan05g3133 Tan-Chr5:83459541 Tan05g3144 Tan-Chr5:83459541 3.30E-291 dispersed
Tan05g3134 Tan-Chr5:83459541 Tan05g3144 Tan-Chr5:83459541 3.30E-291 dispersed
Tan05g3144 Tan-Chr5:83459541 Tan05g3149 Tan-Chr5:83487339 1.40E-302 dispersed
Tan05g3143 Tan-Chr5:83459541 Tan05g3144 Tan-Chr5:83459541 1.10E-153 tandem
Tan05g3144 Tan-Chr5:83459541 Tan05g3145 Tan-Chr5:83459541 1.80E-153 tandem
Tan11g1764 Tan-Chr11:18331119 Tan05g3144 Tan-Chr5:83459541 3.00E-18 transposed
Tan03g2359 Tan-Chr3:77409512 Tan05g3144 Tan-Chr5:83459541 5.90E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67690 PF07714 PK_Tyr_Ser-Thr 1.40E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3144 - - - 0.0