Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3146 ATGCCCAATTTTCTAATTTTACTCTTCCTCCTCTGTTTCGTTTTCCATGGAAACGCTCAGACGACCGCAATTGAATACCCATATCGCAGTTGCTTACCCGACAATTTCACCCAAAATAGCACGTATCAGTCCAGCCTTGATCTACTCTTTTCAAATCTCTCCACCAACGCCCCCGGAATCCATGGATTTTTCAATACTACTGTCGGCCGAACACCAAACGACACTGTTTACGGTCTGTTCCAGTGTCGTGGAGACGTCAGCAACAACACCTGTCGAAATTGCGTGGCCTTAGCAACCCAAAACACAGTCCAACGGTTCTGTCCCCTCAGAAAAAGTGCTGTGGTTTGGTACGACGAGTGCATATTCCGCTATTCCGACCAATCTTTTTTTTCCTTGGTTTCCACAGACACAGAGCAAATTATGCAATTACGTAATAGAGCTGATATAGGCGTCGACACGGCTCGATTCAACCAACTAGTCATGTCCACATTAAGGGCCACTGCGGCCGACGCCTTTTCGGTGGGCGAATTGTTTGCAACCAAGGACGCTATTTTCACATCAGATATAACGCTTTATACATTAGCACAGTGCACCCGCGATTTGTCTAATTTGGATTGCCAACAATGCTTAGCACGAACTATCGATTATGTTCCTAATTGTTGCGCTGATAAACGAGGTGCCAGAGTTTTGTTTCCCAGCTGTTTCGTTCGTTACGAAGTTTACAATTTTTACGAACTCGCCCCAAAGAATCCAGTACCGCCTCCGAAGCCATCTCTTCCTCCTCCTCCACCTCCTCCGCCGCCAGGGGAAAGCAGATCCTCAACGGTGTTAATTGTGGCCACTGTGGTTCCTATTACAATTACTCTCTCCATACTGCTTTTTGTTCTGGTCTTCTGTTTCGTGCGCCGAAGAGCAAAGAAGAGATACACTGCTGTAAAGGAAGATAGTGTTATTGATGAGATCTCCACAGTTGAATTTTTGCAATTTGATTTCAAAACAATCGATGCTGCTACTAACAAATTCTCAGAGGAAAACAGGTTGGGAGAAGGTGGATTTGGTGCAGTCTTCAAGGGTAGACTTGATAATGGACAAGAGATAGCAGTGAAAAGGCTATCCAGAGCATCTCTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTTATGTTGGTTGCTAAGCTTCAACATAGAAATCTAGTGAGGCTATTGGGATTCTGCTTGGAGGGTCGAGAAAGGATACTCATCTATGAATACATCCCCAATAAAAGCCTTGACTTTTTCTTATTTGATCCAAAGAGAAAAAAAGAGTTGGATTGGTCCAAACGATACAAGATCATTAGTGGAATTGCTCGAGGAATCTTATATCTACACGAAGATTCTTGTCTTCGAATTATTCATCGTGATCTTAAAACCAGTAACGTCTTGTTAGATGGAGATATGAATCCAAAAATTTCAGATTTTGGTATGGCAAGAATCATCCAACTGGATCAAACTCAAGGAAATACAAATCGGATTGTTGGTACCTATGGATATATGTCACCCGAGTATGCAATGCACGGAAACTTCTCTTTAAAATCTGATGTGTATAGCTTTGGAGTCTTAGTTTTTGAAATTTTAAGTGGCAAGAGAAACAATACCTTTTACTTATCAGAGCTTGCCGAAGATATGTTATCCTATGCTTGGAAACTATGGAAGGATGGAACATCATTAGAATTGTTGGATCCAAGTCTGAGAGATAGTTACTCAAAAAATCAAGTTCTTCGATGCATTCATATTGCTTTACTATGTGTTCAAGAGGATCCTAGTCGTAGACCTTCCATGGCATCTATTGTTCTTATGCTTAATAGTTATTCTATTACTTTGCCATTGCCTAGAGAGCCAACATTTTTTATGTGCAGTAAAAATGGTGGTATTATAATAGACAATAATCAATCTACAAACAAATCTGTTCAGTTGTCTGTTAATGAAATATCTATATCTGAGTTGTACCCACGATGA 1992 41.11 MPNFLILLFLLCFVFHGNAQTTAIEYPYRSCLPDNFTQNSTYQSSLDLLFSNLSTNAPGIHGFFNTTVGRTPNDTVYGLFQCRGDVSNNTCRNCVALATQNTVQRFCPLRKSAVVWYDECIFRYSDQSFFSLVSTDTEQIMQLRNRADIGVDTARFNQLVMSTLRATAADAFSVGELFATKDAIFTSDITLYTLAQCTRDLSNLDCQQCLARTIDYVPNCCADKRGARVLFPSCFVRYEVYNFYELAPKNPVPPPKPSLPPPPPPPPPGESRSSTVLIVATVVPITITLSILLFVLVFCFVRRRAKKRYTAVKEDSVIDEISTVEFLQFDFKTIDAATNKFSEENRLGEGGFGAVFKGRLDNGQEIAVKRLSRASLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGRERILIYEYIPNKSLDFFLFDPKRKKELDWSKRYKIISGIARGILYLHEDSCLRIIHRDLKTSNVLLDGDMNPKISDFGMARIIQLDQTQGNTNRIVGTYGYMSPEYAMHGNFSLKSDVYSFGVLVFEILSGKRNNTFYLSELAEDMLSYAWKLWKDGTSLELLDPSLRDSYSKNQVLRCIHIALLCVQEDPSRRPSMASIVLMLNSYSITLPLPREPTFFMCSKNGGIIIDNNQSTNKSVQLSVNEISISELYPR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83464028 83467282 + Tan0007255.1 Tan05g3146 754454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3146 663 Gene3D Transferase(Phosphotransferase) domain 1 417 619 - -
Tan05g3146 663 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Tan05g3146 663 Gene3D - 139 243 IPR038408 -
Tan05g3146 663 Gene3D - 23 129 IPR038408 -
Tan05g3146 663 MobiDBLite consensus disorder prediction 253 272 - -
Tan05g3146 663 SUPERFAMILY Protein kinase-like (PK-like) 325 633 IPR011009 -
Tan05g3146 663 ProSiteProfiles Gnk2-homologous domain profile. 24 129 IPR002902 -
Tan05g3146 663 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Tan05g3146 663 Pfam Salt stress response/antifungal 155 240 IPR002902 -
Tan05g3146 663 Gene3D Phosphorylase Kinase; domain 1 316 416 - -
Tan05g3146 663 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 72 628 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3146 663 ProSiteProfiles Protein kinase domain profile. 341 627 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3146 663 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524(InterPro)
Tan05g3146 663 FunFam Cysteine-rich receptor-like protein kinase 10 139 243 - -
Tan05g3146 663 SMART serkin_6 341 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3146 663 MobiDBLite consensus disorder prediction 253 271 - -
Tan05g3146 663 Pfam Protein tyrosine and serine/threonine kinase 344 610 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3146 663 CDD STKc_IRAK 347 613 - -
Tan05g3146 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3146 663 FunFam Cysteine-rich receptor-like protein kinase 10 302 416 - -
Tan05g3146 663 FunFam cysteine-rich receptor-like protein kinase 10 417 619 - -
Tan05g3146 663 ProSiteProfiles Gnk2-homologous domain profile. 137 243 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3146 Tan-Chr5:83464028 Tan05g3149 Tan-Chr5:83487339 2.70E-277 dispersed
Tan05g3145 Tan-Chr5:83459541 Tan05g3146 Tan-Chr5:83464028 5.20E-92 tandem
Tan05g3146 Tan-Chr5:83464028 Tan05g3147 Tan-Chr5:83464028 6.20E-298 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67691 PF07714 PK_Tyr_Ser-Thr 1.60E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3146 - - - 0.0