Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3147 ATGCCCAATTTTCTAATTTTACTCTTCCTCCTCTGTTTCGTTTTCCATGGAAACGCTCAGACGACCGCAATTGAATACCCATATCGCAGTTGCTTACCCGACAATTTCACCCAAAATAGCACGTATCAGTCCAGCCTTGATCTACTCTTTTCAAATCTCTCCACCAACGCCCCCGGAATCCATGGATTTTTCAATACTACTGTCGGCCGAACACCAAACGACACTGTTTACGGTCTGTTCCAGTGTCGTGGAGACGTCAGCAACAACACCTGTCGAAATTGCGTGGCCTTAGCAACCCAAAACACAGTCCAACGGTTCTGTCCCCTCAGAAAAAGTGCTGTGGTTTGGTACGACGAGTGCATATTCCGCTATTCCGACCAATCTTTTTTTTCCTTGGTTTCCACAGACACAGAGCAAATTATGCAATTACGTAATAGAGCTGATATAGGCGTCGACACGGCTCGATTCAACCAACTAGTCATGTCCACATTAAGGGCCACTGCGGCCGACGCCTTTTCGGTGGGCGAATTGTTTGCAACCAAGGACGCTATTTTCACATCAGATATAACGCTTTATACATTAGCACAGTGCACCCGCGATTTGTCTAATTTGGATTGCCAACAATGCTTAGCACGAACTATCGATTATGTTCCTAATTGTTGCGCTGATAAACGAGGTGCCAGAGTTTTGTTTCCCAGCTGTTTCGTTCGTTACGAAGTTTACAATTTTTACGAACTCGCCCCAAAGAATCCAGTACCGCCTCCGAAGCCATCTCTTCCTCCTCCTCCACCTCCTCCGCCGCCAGGGGAAAGCAGATCCTCAACGGTGTTAATTGTGGCCACTGTGGTTCCTATTACAATTACTCTCTCCATACTGCTTTTTGTTCTGGTCTTCTGTTTCGTGCGCCGAAGAGCAAAGAAGAGATACACTGCTGTAAAGGAAGATAGTGTTATTGATGAGATCTCCACAGTTGAATTTTTGCAATTTGATTTCAAAACAATCGATGCTGCTACTAACAAATTCTCAGAGGAAAACAGGTTGGGAGAAGGTGGATTTGGTGCAGTCTTCAAGGGTAGACTTGATAATGGACAAGAGATAGCAGTGAAAAGGCTATCCAGAGCATCTCTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTTATGTTGGTTGCTAAGCTTCAACATAGAAATCTAGTGAGGCTATTGGGATTCTGCTTGGAGGGTCGAGAAAGGATACTCATCTATGAATACATCCCCAATAAAAGCCTTGACTTTTTCTTATTTGATCCAAAGAGAAAAAAAGAGTTGGATTGGTCCAAACGATACAAGATCATTAGTGGAATTGCTCGAGGAATCTTATATCTACACGAAGATTCTTGTCTTCGAATTATTCATCGTGATCTTAAAACCAGTAACGTCTTGTTAGATGGAGATATGAATCCAAAAATTTCAGATTTTGGTATGGCAAGAATCATCCAACTGGATCAAACTCAAGGAAATACAAATCGGATTGTTGGTACCTATGGATATATGTCACCCGAGTATGCAATGCACGGAAACTTCTCTTTAAAATCTGATGTGTATAGCTTTGGAGTCTTAGTTTTTGAAATTTTAAGTGGCAAGAGAAACAATACCTTTTACTTATCAGAGCTTGCCGAAGATATGTTATCCTATGTAAGTCAAGAATTCCTTACTCTTATTTAA 1701 42.15 MPNFLILLFLLCFVFHGNAQTTAIEYPYRSCLPDNFTQNSTYQSSLDLLFSNLSTNAPGIHGFFNTTVGRTPNDTVYGLFQCRGDVSNNTCRNCVALATQNTVQRFCPLRKSAVVWYDECIFRYSDQSFFSLVSTDTEQIMQLRNRADIGVDTARFNQLVMSTLRATAADAFSVGELFATKDAIFTSDITLYTLAQCTRDLSNLDCQQCLARTIDYVPNCCADKRGARVLFPSCFVRYEVYNFYELAPKNPVPPPKPSLPPPPPPPPPGESRSSTVLIVATVVPITITLSILLFVLVFCFVRRRAKKRYTAVKEDSVIDEISTVEFLQFDFKTIDAATNKFSEENRLGEGGFGAVFKGRLDNGQEIAVKRLSRASLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGRERILIYEYIPNKSLDFFLFDPKRKKELDWSKRYKIISGIARGILYLHEDSCLRIIHRDLKTSNVLLDGDMNPKISDFGMARIIQLDQTQGNTNRIVGTYGYMSPEYAMHGNFSLKSDVYSFGVLVFEILSGKRNNTFYLSELAEDMLSYVSQEFLTLI 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83464028 83467282 + Tan0007255.2 Tan05g3147 754455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3147 566 MobiDBLite consensus disorder prediction 253 272 - -
Tan05g3147 566 Gene3D - 23 129 IPR038408 -
Tan05g3147 566 Gene3D - 139 243 IPR038408 -
Tan05g3147 566 FunFam Cysteine-rich receptor-like protein kinase 25 139 243 - -
Tan05g3147 566 ProSiteProfiles Gnk2-homologous domain profile. 24 129 IPR002902 -
Tan05g3147 566 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Tan05g3147 566 Pfam Salt stress response/antifungal 155 240 IPR002902 -
Tan05g3147 566 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524(InterPro)
Tan05g3147 566 SUPERFAMILY Protein kinase-like (PK-like) 320 544 IPR011009 -
Tan05g3147 566 Pfam Protein tyrosine and serine/threonine kinase 344 541 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3147 566 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 72 558 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3147 566 Gene3D Transferase(Phosphotransferase) domain 1 417 563 - -
Tan05g3147 566 MobiDBLite consensus disorder prediction 253 271 - -
Tan05g3147 566 Gene3D Phosphorylase Kinase; domain 1 316 416 - -
Tan05g3147 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3147 566 FunFam Lectin-domain containing receptor kinase A4.3 417 563 - -
Tan05g3147 566 SMART serkin_6 341 563 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3147 566 ProSiteProfiles Protein kinase domain profile. 341 566 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3147 566 FunFam Cysteine-rich receptor-like protein kinase 10 302 416 - -
Tan05g3147 566 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Tan05g3147 566 ProSiteProfiles Gnk2-homologous domain profile. 137 243 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3147 Tan-Chr5:83464028 Tan05g3149 Tan-Chr5:83487339 9.20E-226 dispersed
Tan05g3146 Tan-Chr5:83464028 Tan05g3147 Tan-Chr5:83464028 6.20E-298 tandem
Tan05g3147 Tan-Chr5:83464028 Tan05g3148 Tan-Chr5:83480621 8.60E-208 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67692 PF07714 PK_Tyr_Ser-Thr 8.20E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3147 - - - 0.0