Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3149 ATGGCCGCAACGAGTGCGAAACAGAATTACTTCTTTAACATGCTCAATTTTCTTACTTTCCTCTTCCTCCTCAGTTTCGTTATCCATGGAAACTCCCAGACCCCAGTTTCTTACCCGTATCGCGCTTGCTTACCCGACAATTTCACCCAGAATAGCACCTATCAGTCCAACCTTAATCTTCTCTTTTCAAATCTCTCCGCCAACGGCCCCGAAAGAAATAGATTCTTCAATACTTCCGTCGGCCGACCACCAAACGACACCGTTTACGGTCTCTTCCAGTGCCGTGGAGATGTCAACAACAGCACCTGTCGAACTTGTTTGACCACCGCTACTAGAGACATAGCCCGGCTTTACTGTCCCCTGAGTAAAGGCGCTGTGATTTGGTACGACGCCTGCATACTCCGGTATTCCGACCAATCTTTCTCTTCCGTCATGTCCACAGATCCAAGTTTGGCATTACTGAATACGGCTGATATAGACGTCGACAAGGCTCGATTCAACCAATTAGTGATGTCCACATTGAGGGACACCGCGGCTCGGGCAGCCAACGCCTCTTCGGTGGGCGAATTGTTTGCAACGCAGGAGGCTAATTTCACATCAGATCTGACGCTTTACACATTAGTACAGTGTACCGGCGACTTGTCCAATTCGGATTGTGAAGAATGCTTAAGACAAGCTACCAATAATATTCCGAGTTGTTGCACTAATAAACGAGGTGGCAGAGTTCTGCTTCCCAGTTGTTTCGTTCGTTACGAAGTTTACATGTTTTACGAAGCTACACCAACGAATTCAGTTCCTCCTCCGGCAACTCCCACGCCCAATTCCACAACTCCAATTTTACCTTTTCTTCCTCCTCCTTCTCGGCCAGGGGAAAGTAAATCCTCAACGGTGTTAATTGTAGCCATTGCGGCTCCAATTACTGTCTCCATACTGCTCTTTGTTCTGGGATGTTGTTTCCTGCGCCGAAGAGCGAAGAAGAGATACACCGCTGAAAGGGAAGATAGTGTTGTTAACGAGATGACCACTGTGGAATCTCTGCAATTCGATTTCAAAACAATCGATGCTGCTACTAACAAATTCTCAGAGGAAAACAGGTTGGGAGAAGGTGGATTTGGTGCAGTCTTCAAGGGTATACTTGATAATGGACAAGAGATAGCAGTGAAAAGGCTATCAAGAGGATCTCTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTTATGTTGGTTGCTAAGCTTCAACATAGAAATCTAGTGAGGCTATTGGGATTCTGCTTGGAGGGTGAAGAGAAGATACTCATCTATGAATACATTCCTAACAAAAGCCTCGACTATTTCTTGTTTGATTCTGCGAGACAAACAGAGTTGGATTGGTTGAAACGATATAAAATCATCAATGGAATTGCTCGAGGAATATTATATCTACATGAAGATTCTCGTCTTCGAATCATTCATCGTGATCTTAAAGCGAGTAATATCTTGTTAGATAGAGATATGAATCCCAAAATTTCAGACTTTGGTATGGCAAGAATTGTGCAAATGGATCAAACTCAAGGAAACACAAATAGGATTGTTGGTACCTACGGCTATATGTCTCCCGAATATGCAATGCATGGTAACTTCTCTATGAAGTCAGATGTGTATAGCTTTGGAGTCTTAGTCTTGGAGATTTTAAGCGGCAAGAAAAACAACACCTTTTATTTGTTAGATCTTGCTGAAGACATTTTGACCTATGCTTGGAAACTGTGGAATGATGGAATACCATTAGAATTATTGGACCCGAGTCTAAGAGATAGTTACTCAAGAAATGAGGTGCTTAGATGCATTCATATTGCTTTATTATGTGTTCAAGAGGATCCTAGTAGTAGACCTTCCATGGCATCTATTGTTCTCATGCTTAATAGTTATTCGGTTACTTTGCCATTACCTGAAGAACCAGCATTATTCATGCGCAGTAAAGATAATGGGATTACAATAGACAGTGATCAATCTACGAATAGGTCTATCCAGTGGTCTGCCAATGAAACATCTATATCTGAGTTGCATCCACGATGA 2049 42.85 MAATSAKQNYFFNMLNFLTFLFLLSFVIHGNSQTPVSYPYRACLPDNFTQNSTYQSNLNLLFSNLSANGPERNRFFNTSVGRPPNDTVYGLFQCRGDVNNSTCRTCLTTATRDIARLYCPLSKGAVIWYDACILRYSDQSFSSVMSTDPSLALLNTADIDVDKARFNQLVMSTLRDTAARAANASSVGELFATQEANFTSDLTLYTLVQCTGDLSNSDCEECLRQATNNIPSCCTNKRGGRVLLPSCFVRYEVYMFYEATPTNSVPPPATPTPNSTTPILPFLPPPSRPGESKSSTVLIVAIAAPITVSILLFVLGCCFLRRRAKKRYTAEREDSVVNEMTTVESLQFDFKTIDAATNKFSEENRLGEGGFGAVFKGILDNGQEIAVKRLSRGSLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKILIYEYIPNKSLDYFLFDSARQTELDWLKRYKIINGIARGILYLHEDSRLRIIHRDLKASNILLDRDMNPKISDFGMARIVQMDQTQGNTNRIVGTYGYMSPEYAMHGNFSMKSDVYSFGVLVLEILSGKKNNTFYLLDLAEDILTYAWKLWNDGIPLELLDPSLRDSYSRNEVLRCIHIALLCVQEDPSSRPSMASIVLMLNSYSVTLPLPEEPALFMRSKDNGITIDSDQSTNRSIQWSANETSISELHPR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83487339 83490530 + Tan0020912.1 Tan05g3149 754457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3149 682 Pfam Salt stress response/antifungal 46 139 IPR002902 -
Tan05g3149 682 Pfam Salt stress response/antifungal 164 253 IPR002902 -
Tan05g3149 682 Gene3D - 36 141 IPR038408 -
Tan05g3149 682 Gene3D - 151 256 IPR038408 -
Tan05g3149 682 Gene3D Transferase(Phosphotransferase) domain 1 436 638 - -
Tan05g3149 682 ProSiteProfiles Gnk2-homologous domain profile. 147 256 IPR002902 -
Tan05g3149 682 SUPERFAMILY Protein kinase-like (PK-like) 345 663 IPR011009 -
Tan05g3149 682 ProSiteProfiles Protein kinase domain profile. 360 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3149 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 72 647 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3149 682 FunFam Cysteine-rich receptor-like protein kinase 25 149 256 - -
Tan05g3149 682 FunFam cysteine-rich receptor-like protein kinase 10 436 638 - -
Tan05g3149 682 SMART serkin_6 360 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3149 682 FunFam Cysteine-rich receptor-like protein kinase 10 321 435 - -
Tan05g3149 682 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 36 141 - -
Tan05g3149 682 CDD STKc_IRAK 366 632 - -
Tan05g3149 682 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524(InterPro)
Tan05g3149 682 Pfam Protein tyrosine and serine/threonine kinase 363 629 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3149 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3149 682 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Tan05g3149 682 Gene3D Phosphorylase Kinase; domain 1 321 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0308 Tan-Chr2:2589279 Tan05g3149 Tan-Chr5:83487339 8.80E-35 dispersed
Tan03g2370 Tan-Chr3:77530275 Tan05g3149 Tan-Chr5:83487339 3.50E-117 dispersed
Tan05g2264 Tan-Chr5:73544255 Tan05g3149 Tan-Chr5:83487339 3.80E-93 dispersed
Tan05g3130 Tan-Chr5:83411324 Tan05g3149 Tan-Chr5:83487339 6.40E-303 dispersed
Tan05g3131 Tan-Chr5:83423345 Tan05g3149 Tan-Chr5:83487339 1.50E-267 dispersed
Tan05g3132 Tan-Chr5:83440176 Tan05g3149 Tan-Chr5:83487339 1.40E-240 dispersed
Tan05g3144 Tan-Chr5:83459541 Tan05g3149 Tan-Chr5:83487339 1.40E-302 dispersed
Tan05g3145 Tan-Chr5:83459541 Tan05g3149 Tan-Chr5:83487339 6.20E-138 dispersed
Tan05g3146 Tan-Chr5:83464028 Tan05g3149 Tan-Chr5:83487339 2.70E-277 dispersed
Tan05g3147 Tan-Chr5:83464028 Tan05g3149 Tan-Chr5:83487339 9.20E-226 dispersed
Tan05g3149 Tan-Chr5:83487339 Tan05g3151 Tan-Chr5:83512531 4.60E-288 dispersed
Tan05g3156 Tan-Chr5:83522134 Tan05g3149 Tan-Chr5:83487339 3.10E-69 dispersed
Tan05g3157 Tan-Chr5:83522134 Tan05g3149 Tan-Chr5:83487339 3.10E-69 dispersed
Tan11g1764 Tan-Chr11:18331119 Tan05g3149 Tan-Chr5:83487339 9.40E-20 dispersed
Tan05g3148 Tan-Chr5:83480621 Tan05g3149 Tan-Chr5:83487339 8.10E-274 tandem
Tan05g3149 Tan-Chr5:83487339 Tan05g3150 Tan-Chr5:83487339 4.50E-304 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67694 PF07714 PK_Tyr_Ser-Thr 1.60E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3149 - - - 0.0