Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3150 ATGGCCGCAACGAGTGCGAAACAGAATTACTTCTTTAACATGCTCAATTTTCTTACTTTCCTCTTCCTCCTCAGTTTCGTTATCCATGGAAACTCCCAGACCCCAGTTTCTTACCCGTATCGCGCTTGCTTACCCGACAATTTCACCCAGAATAGCACCTATCAGTCCAACCTTAATCTTCTCTTTTCAAATCTCTCCGCCAACGGCCCCGAAAGAAATAGATTCTTCAATACTTCCGTCGGCCGACCACCAAACGACACCGTTTACGGTCTCTTCCAGTGCCGTGGAGATGTCAACAACAGCACCTGTCGAACTTGTTTGACCACCGCTACTAGAGACATAGCCCGGCTTTACTGTCCCCTGAGTAAAGGCGCTGTGATTTGGTACGACGCCTGCATACTCCGGTATTCCGACCAATCTTTCTCTTCCGTCATGTCCACAGATCCAAGTTTGGCATTACTGAATACGGCTGATATAGACGTCGACAAGGCTCGATTCAACCAATTAGTGATGTCCACATTGAGGGACACCGCGGCTCGGGCAGCCAACGCCTCTTCGGTGGGCGAATTGTTTGCAACGCAGGAGGCTAATTTCACATCAGATCTGACGCTTTACACATTAGTACAGTGTACCGGCGACTTGTCCAATTCGGATTGTGAAGAATGCTTAAGACAAGCTACCAATAATATTCCGAGTTGTTGCACTAATAAACGAGGTGGCAGAGTTCTGCTTCCCAGTTGTTTCGTTCGTTACGAAGTTTACATGTTTTACGAAGCTACACCAACGAATTCAGTTCCTCCTCCGGCAACTCCCACGCCCAATTCCACAACTCCAATTTTACCTTTTCTTCCTCCTCCTTCTCGGCCAGGGGAAAGTAAATCCTCAACGGTGTTAATTGTAGCCATTGCGGCTCCAATTACTGTCTCCATACTGCTCTTTGTTCTGGGATGTTGTTTCCTGCGCCGAAGAGCGAAGAAGAGATACACCGCTGAAAGGGAAGATAGTGTTGTTAACGAGATGACCACTGTGGAATCTCTGCAATTCGATTTCAAAACAATCGATGCTGCTACTAACAAATTCTCAGAGGAAAACAGGTTGGGAGAAGGTGGATTTGGTGCAGTCTTCAAGGGTATACTTGATAATGGACAAGAGATAGCAGTGAAAAGGCTATCAAGAGGATCTCTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTTATGTTGGTTGCTAAGCTTCAACATAGAAATCTAGTGAGGCTATTGGGATTCTGCTTGGAGGGTGAAGAGAAGATACTCATCTATGAATACATTCCTAACAAAAGCCTCGACTATTTCTTGTTTGATTCTGCGAGACAAACAGAGTTGGATTGGTTGAAACGATATAAAATCATCAATGGAATTGCTCGAGGAATATTATATCTACATGAAGATTCTCGTCTTCGAATCATTCATCGTGATCTTAAAGCGAGTAATATCTTGTTAGATAGAGATATGAATCCCAAAATTTCAGACTTTGGTATGGCAAGAATTGTGCAAATGGATCAAACTCAAGGAAACACAAATAGGATTGTTGGTACCTAG 1578 44.3 MAATSAKQNYFFNMLNFLTFLFLLSFVIHGNSQTPVSYPYRACLPDNFTQNSTYQSNLNLLFSNLSANGPERNRFFNTSVGRPPNDTVYGLFQCRGDVNNSTCRTCLTTATRDIARLYCPLSKGAVIWYDACILRYSDQSFSSVMSTDPSLALLNTADIDVDKARFNQLVMSTLRDTAARAANASSVGELFATQEANFTSDLTLYTLVQCTGDLSNSDCEECLRQATNNIPSCCTNKRGGRVLLPSCFVRYEVYMFYEATPTNSVPPPATPTPNSTTPILPFLPPPSRPGESKSSTVLIVAIAAPITVSILLFVLGCCFLRRRAKKRYTAEREDSVVNEMTTVESLQFDFKTIDAATNKFSEENRLGEGGFGAVFKGILDNGQEIAVKRLSRGSLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKILIYEYIPNKSLDYFLFDSARQTELDWLKRYKIINGIARGILYLHEDSRLRIIHRDLKASNILLDRDMNPKISDFGMARIVQMDQTQGNTNRIVGT 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83487339 83490530 + Tan0020912.2 Tan05g3150 754458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3150 525 Pfam Protein tyrosine and serine/threonine kinase 363 516 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3150 525 Pfam Salt stress response/antifungal 46 139 IPR002902 -
Tan05g3150 525 Pfam Salt stress response/antifungal 164 253 IPR002902 -
Tan05g3150 525 ProSiteProfiles Gnk2-homologous domain profile. 147 256 IPR002902 -
Tan05g3150 525 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 36 141 - -
Tan05g3150 525 ProSiteProfiles Protein kinase domain profile. 360 525 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3150 525 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 67 525 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3150 525 SUPERFAMILY Protein kinase-like (PK-like) 337 525 IPR011009 -
Tan05g3150 525 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 436 525 - -
Tan05g3150 525 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524(InterPro)
Tan05g3150 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3150 525 Gene3D Phosphorylase Kinase; domain 1 321 435 - -
Tan05g3150 525 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Tan05g3150 525 FunFam Cysteine-rich receptor-like protein kinase 10 321 435 - -
Tan05g3150 525 Gene3D - 151 256 IPR038408 -
Tan05g3150 525 Gene3D - 36 141 IPR038408 -
Tan05g3150 525 Gene3D Transferase(Phosphotransferase) domain 1 436 525 - -
Tan05g3150 525 SMART serkin_6 360 523 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3150 525 FunFam Cysteine-rich receptor-like protein kinase 25 149 256 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3150 Tan-Chr5:83487339 Tan05g3152 Tan-Chr5:83512531 4.90E-173 dispersed
Tan05g3149 Tan-Chr5:83487339 Tan05g3150 Tan-Chr5:83487339 4.50E-304 tandem
Tan05g3150 Tan-Chr5:83487339 Tan05g3151 Tan-Chr5:83512531 2.80E-216 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67695 PF07714 PK_Tyr_Ser-Thr 3.00E-33 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3150 - - - 0.0