Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3151 ATGGGCGCAACGAGTGCAAAACTCAATTGTTGCTTCAACATGCTCAATTTCCCAACTTTCCTCTTCCTTCTCAGTTTCGGGCTTATCCATGGAAACGCTCAGACTTCAGATGGGTACCCATATCGCAGTTGCTTATCCGGAAATTTCACCCAAAATAGCACCTATCAATCCAACCTTAATCTTCTCTTTTCAACTCTCTCCACCAACGCCCCCGGAATCAATGGATTTTTCAATACTTCCGTTGGCCGAACTCCAGAAGACACCGTTCACGGTCTCTTCCAGTGCCGTGGAGACATCACCAATCGATCCTGCCAAAATTGCGTGGCCGTAGCTACCAGAGACGTAGCCCAACTGTACTGTCCTCTTAGAAAAGGCGCTGTGGTTTGGCACAACGAGTGCATCTTACGTTATTCCGACCAATCTTTCTTTTCCATCGTCTCCACATTCCCAATGTTAGAATTATGGATTACAGCCGATATAGAAGTCGACAAGGGTCAATTCAACCAACTAGTGTTGTCCACGTTGAGGACCAAGACGGCTCCGGCGGCCTCTAATTCAGTGGGCAAATTGTTTGCAACGCAGGAGGCAAATTTCACATCAGATATAATGCTCTACACATTAGCACAGTGCACCGGTGATTTGTCTAATATGGATTGCCAACAATGCTTATCGCGAGCTATCGATTATATTCCCGATTGTTGCACTAATAAACGAGGTGCCCGAGTTTTGTTTCCCAGCTGTTACGTTCGTTACGAAATCTACGTGTTTTACCAACTCACGCCAATAAATTCGGCACTACCTTTTCTTTCTCCTCCTCCTCCGCCAGGGGAAAGCAGATCGTTAACGGTGTTAATTGTAGCCATTGTGGTTTCAATTACATTTACTCTCTCTATACTGCTATTTGTTCTGGGATGTTGTTTCCTGCGCCGTAGAGCGAAGAAGAGATACACTTCTGGAAAGGAAGATAGTGTTGTTACTGAGATGACCACTGTGGAATCTCTACAATTTGATTTCAAAACAATCGATGCTGCTACTAGCAAATTCTCAGAGGAAAACAGGTTGGGAGCAGGTGGATTTGGTGCAGTCTACAAGGGTAGGCTTGATAATGGACAAGAGATAGCAGTGAAAAGACTATCAAGAAGATCTGTGCAAGGTTCTACAGAGTTCAAGAATGAGGTTATTTTGGTTGCTAAGCTTCAACATAGAAATCTAGTGAAGCTATTGGGATTCTGCTTGGAGGGTGAAGAAAAAATACTCATCTATGAATACATTTACAACAAAAGCCTTGACTTTTTCATATTTGATCCAATCAGACAAAGAGAGTTGGATTGGTTGAAACGATATAAGATCATCAATGGAATTGCTCGAGGAATATTATATTTGCACGAAGATTCTCGTCTTCGAATTATTCATCGTGATCTTAAAGCGAGTAACATCTTGTTAGATGAAGATATGAATCCTAAAATTTCAGACTTTGGTATGGCAAGAATTGTGCAACTAGATCAAACTCAAGGAATTACAAGTAGAATTGTTGGTACATACGGTTACATGTCTCCTGAATATGCAAGACATGGAAACTTTTCTATGAAATCCGATGTGTATAGTTTTGGAGTCTTGGTCTTGGAGATTTTAAGTGGCAAGAGAAACCACACTTTTTACTTGTCGAATCTTGCCAAAGATATTTTGACCCATGCTTGGAACCTATGGAAGGACGGAACACCATTAGAATTATTGGACCCAAGTTTGAGAGACAATTGCTCAAGAAATGAGGTGCTTAGATGCATTCATATGGCTTTATTATGTGTTCAGGAGGATCCTAGCAGTAGACCTTCCATGGCATCCATTGTTCTTATGCTTAATAGTTATTCAGTTACTTTACCCTTGCCTAGAGAGCCAGCGTTCTTCATGCACGGTATGATAAACAATGATCAATTGTCTCTGAGTAAGTCTGTCCAACAGTCTCCCAATGAAGTTTCTATGTCTGAGTTGCATCCACGATGA 2001 41.73 MGATSAKLNCCFNMLNFPTFLFLLSFGLIHGNAQTSDGYPYRSCLSGNFTQNSTYQSNLNLLFSTLSTNAPGINGFFNTSVGRTPEDTVHGLFQCRGDITNRSCQNCVAVATRDVAQLYCPLRKGAVVWHNECILRYSDQSFFSIVSTFPMLELWITADIEVDKGQFNQLVLSTLRTKTAPAASNSVGKLFATQEANFTSDIMLYTLAQCTGDLSNMDCQQCLSRAIDYIPDCCTNKRGARVLFPSCYVRYEIYVFYQLTPINSALPFLSPPPPPGESRSLTVLIVAIVVSITFTLSILLFVLGCCFLRRRAKKRYTSGKEDSVVTEMTTVESLQFDFKTIDAATSKFSEENRLGAGGFGAVYKGRLDNGQEIAVKRLSRRSVQGSTEFKNEVILVAKLQHRNLVKLLGFCLEGEEKILIYEYIYNKSLDFFIFDPIRQRELDWLKRYKIINGIARGILYLHEDSRLRIIHRDLKASNILLDEDMNPKISDFGMARIVQLDQTQGITSRIVGTYGYMSPEYARHGNFSMKSDVYSFGVLVLEILSGKRNHTFYLSNLAKDILTHAWNLWKDGTPLELLDPSLRDNCSRNEVLRCIHMALLCVQEDPSSRPSMASIVLMLNSYSVTLPLPREPAFFMHGMINNDQLSLSKSVQQSPNEVSMSELHPR 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83512531 83515356 + Tan0022319.1 Tan05g3151 754459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3151 666 ProSiteProfiles Gnk2-homologous domain profile. 148 256 IPR002902 -
Tan05g3151 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3151 666 ProSiteProfiles Protein kinase domain profile. 348 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3151 666 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 168 635 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Tan05g3151 666 Gene3D - 37 142 IPR038408 -
Tan05g3151 666 Gene3D - 154 256 IPR038408 -
Tan05g3151 666 Pfam Salt stress response/antifungal 171 253 IPR002902 -
Tan05g3151 666 Pfam Salt stress response/antifungal 47 140 IPR002902 -
Tan05g3151 666 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524(InterPro)
Tan05g3151 666 SUPERFAMILY Protein kinase-like (PK-like) 333 653 IPR011009 -
Tan05g3151 666 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Tan05g3151 666 FunFam Cysteine-rich receptor-like protein kinase 10 309 423 - -
Tan05g3151 666 FunFam cysteine-rich receptor-like protein kinase 10 424 626 - -
Tan05g3151 666 Pfam Protein tyrosine and serine/threonine kinase 351 617 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3151 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 38 142 - -
Tan05g3151 666 SMART serkin_6 348 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3151 666 CDD STKc_IRAK 354 620 - -
Tan05g3151 666 Gene3D Transferase(Phosphotransferase) domain 1 425 626 - -
Tan05g3151 666 FunFam Cysteine-rich receptor-like protein kinase 10 152 256 - -
Tan05g3151 666 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3148 Tan-Chr5:83480621 Tan05g3151 Tan-Chr5:83512531 2.40E-249 dispersed
Tan05g3149 Tan-Chr5:83487339 Tan05g3151 Tan-Chr5:83512531 4.60E-288 dispersed
Tan05g3151 Tan-Chr5:83512531 Tan05g3153 Tan-Chr5:83512531 1.00E-239 dispersed
Tan11g2173 Tan-Chr11:56792933 Tan05g3151 Tan-Chr5:83512531 6.50E-106 dispersed
Tan05g3150 Tan-Chr5:83487339 Tan05g3151 Tan-Chr5:83512531 2.80E-216 tandem
Tan05g3151 Tan-Chr5:83512531 Tan05g3152 Tan-Chr5:83512531 1.00E-239 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67696 PF07714 PK_Tyr_Ser-Thr 1.60E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3151 - - - 0.0