Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g3182 | ATGGCCGACGAATTTCCATCCAAAACCCTCTTCTCGTCGGCGGCCAATCCCTCGCCGTGTTCCATCGGTGACTCCACCTTCTTGATAGATCCGACCATTCGAACGGCTTCCAATTGGAACCAAAATTTTCATGGAGATGACGGACAAAGAGTTGACACCACTTTGGTGGTGGATTCAATCACGGCCACAAAATTAAATTATGATCACCAAGAAACTTGTAGATCTGATGAACAACAAAATCCTTCCATTTTGAAAGCCGATCATGACTTTGTGTTTTTAATGGACCAACCTAATTATAATCAAAGCCCTTCCAACTTTTACGATGATGTTATTACAACTACATGCCAAGGGTTGCCAACGGCTTTCCCTTTTGGGATCATTTCAAATGGGTACACTCCAACATTGTTTCATAATTCATTGGATCAACCAAAACCATTTCTTGCCGACAACCGCCGGAACATTAATTGTTGTTCGTCAACAAATTCAGAGGAATCGTTGTCTTGTCGTCCACTGTTTGAAGAAACCCACTTTCTACAGCCTCCAGCCTTGAATTTCTCGGCCAACAATATTAGACCCAAATGCCCAAATCTCACAACGAAGCTGATTAGTTGTGGGGAAGTTGTTCAAGAATCGAGTAGGGTTGAGAGGAAAAACGAAAGTAATGAAATTGCAATAATCAAAAGGCCAAGAAGTGACATGCCATCCACATTACCCACTTTTAAGGTTCGAAAAGAGAAGCTTGGCGACAAGATCACAGCACTCCAACAACTCGTTTCTCCTTTTGGAAAGACTGATGCCGCATCAGTTCTACATGAAGCAATTGAGTACATTAAGTTTCTTCATGATCAAGTTCGTGTTTTAAGTTCTCCATATATGGAAGTTGGAAAACACGATCAAGAGCAACAGGTTAAGGAAAAATTGAGAGACACGAAGGAGAATAAGAAACAAGATCTAAGAAGTCGAGGACTTTGTCTTGTGGCTATTCCTAGTACAGTTGCATTAGCAAATGGTAATACACTTGATTTCTGGTCGCCAACATTTGGAGGAACATTTAGGTAA | 1059 | 41.17 | MADEFPSKTLFSSAANPSPCSIGDSTFLIDPTIRTASNWNQNFHGDDGQRVDTTLVVDSITATKLNYDHQETCRSDEQQNPSILKADHDFVFLMDQPNYNQSPSNFYDDVITTTCQGLPTAFPFGIISNGYTPTLFHNSLDQPKPFLADNRRNINCCSSTNSEESLSCRPLFEETHFLQPPALNFSANNIRPKCPNLTTKLISCGEVVQESSRVERKNESNEIAIIKRPRSDMPSTLPTFKVRKEKLGDKITALQQLVSPFGKTDAASVLHEAIEYIKFLHDQVRVLSSPYMEVGKHDQEQQVKEKLRDTKENKKQDLRSRGLCLVAIPSTVALANGNTLDFWSPTFGGTFR | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 83865952 | 83869728 | + | Tan0014821.1 | Tan05g3182 | 754490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g3182 | 352 | CDD | bHLH_AtbHLH_like | 237 | 288 | IPR045239 | - | |
Tan05g3182 | 352 | Gene3D | - | 241 | 317 | IPR036638 | GO:0046983(InterPro) | |
Tan05g3182 | 352 | FunFam | Transcription factor bHLH123 family | 241 | 303 | - | - | |
Tan05g3182 | 352 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 241 | 294 | IPR036638 | GO:0046983(InterPro) | |
Tan05g3182 | 352 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 231 | 280 | IPR011598 | GO:0046983(InterPro) | |
Tan05g3182 | 352 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 67 | 330 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Tan05g3182 | 352 | Coils | Coil | 297 | 317 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0987 | Tan-Chr2:13798182 | Tan05g3182 | Tan-Chr5:83865952 | 3.20E-27 | dispersed | |
Tan03g2383 | Tan-Chr3:77601358 | Tan05g3182 | Tan-Chr5:83865952 | 1.00E-41 | dispersed | |
Tan04g1767 | Tan-Chr4:48391597 | Tan05g3182 | Tan-Chr5:83865952 | 2.10E-15 | dispersed | |
Tan04g1768 | Tan-Chr4:48391597 | Tan05g3182 | Tan-Chr5:83865952 | 1.10E-15 | dispersed | |
Tan05g3182 | Tan-Chr5:83865952 | Tan05g3184 | Tan-Chr5:83865952 | 1.50E-178 | dispersed | |
Tan05g3182 | Tan-Chr5:83865952 | Tan05g3183 | Tan-Chr5:83865952 | 7.40E-149 | tandem | |
Tan01g1649 | Tan-Chr1:17283299 | Tan05g3182 | Tan-Chr5:83865952 | 4.30E-42 | wgd | |
Tan03g2382 | Tan-Chr3:77601358 | Tan05g3182 | Tan-Chr5:83865952 | 1.40E-43 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g3182 | - | - | - | 0.0 |