Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g3183 | ATGGACCAACCTAATTATAATCAAAGCCCTTCCAACTTTTACGATGATGTTATTACAACTACATGCCAAGGGTTGCCAACGGCTTTCCCTTTTGGGATCATTTCAAATGGGTACACTCCAACATTGTTTCATAATTCATTGGATCAACCAAAACCATTTCTTGCCGACAACCGCCGGAACATTAATTGTTGTTCGTCAACAAATTCAGAGGAATCGTTGTCTTGTCGTCCACTGTTTGAAGAAACCCACTTTCTACAGCCTCCAGCCTTGAATTTCTCGGCCAACAATATTAGACCCAAATGCCCAAATCTCACAACGAAGCTGATTAGTTGTGGGGAAGTTGTTCAAGAATCGAGTAGGGTTGAGAGGAAAAACGAAAGTAATGAAATTGCAATAATCAAAAGGCCAAGAAGTGACATGCCATCCACATTACCCACTTTTAAGGTTCGAAAAGAGAAGCTTGGCGACAAGATCACAGCACTCCAACAACTCGTTTCTCCTTTTGGAAAGACTGATGCCGCATCAGTTCTACATGAAGCAATTGAGTACATTAAGTTTCTTCATGATCAAGTTCGTGTTTTAAGTTCTCCATATATGGAAGTTGGAAAACACGATCAAGAGCAACAGGTTAAGGAAAAATTGAGAGACACGAAGGAGAATAAGAAACAAGATCTAAGAAGTCGAGGACTTTGTCTTGTGGCTATTCCTAGTACAGTTGCATTAGCAAATGGTAATACACTTGATTTCTGGTCGCCAACATTTGGAGGAACATTTAGGTAA | 780 | 40.13 | MDQPNYNQSPSNFYDDVITTTCQGLPTAFPFGIISNGYTPTLFHNSLDQPKPFLADNRRNINCCSSTNSEESLSCRPLFEETHFLQPPALNFSANNIRPKCPNLTTKLISCGEVVQESSRVERKNESNEIAIIKRPRSDMPSTLPTFKVRKEKLGDKITALQQLVSPFGKTDAASVLHEAIEYIKFLHDQVRVLSSPYMEVGKHDQEQQVKEKLRDTKENKKQDLRSRGLCLVAIPSTVALANGNTLDFWSPTFGGTFR | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 83865952 | 83869728 | + | Tan0014821.2 | Tan05g3183 | 754491 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g3183 | 259 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 94 | 237 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Tan05g3183 | 259 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 148 | 202 | IPR036638 | GO:0046983(InterPro) | |
Tan05g3183 | 259 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 138 | 187 | IPR011598 | GO:0046983(InterPro) | |
Tan05g3183 | 259 | CDD | bHLH_AtbHLH_like | 144 | 195 | IPR045239 | - | |
Tan05g3183 | 259 | Gene3D | - | 148 | 226 | IPR036638 | GO:0046983(InterPro) | |
Tan05g3183 | 259 | FunFam | Transcription factor bHLH123 family | 148 | 210 | - | - | |
Tan05g3183 | 259 | Coils | Coil | 204 | 224 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g3183 | Tan-Chr5:83865952 | Tan09g1255 | Tan-Chr9:64884174 | 8.10E-28 | dispersed | |
Tan05g3182 | Tan-Chr5:83865952 | Tan05g3183 | Tan-Chr5:83865952 | 7.40E-149 | tandem | |
Tan05g3183 | Tan-Chr5:83865952 | Tan05g3184 | Tan-Chr5:83865952 | 4.80E-121 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g3183 | - | - | - | 0.0 |