Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3187 ATGCTTCAACTTTTTTGCAGCTCTAAACTCTGTTGCCTTCCCATTAATAATATAACAATCCCTTTTCGCCCTCTTTGTTCAATTTCCAATGAACTGTCAACCATGAATCCTCACAAATGGTTCTTCTTTCATATATTGTTGTTTTTGACCATTTTTGTTGGCACCCATTTTAGCCTCGCCGTTGATATCAACTCCACGGTTGTTATTATCAAAGATGGAGATCCATTGGTATCCACGAACAAGAATTTCGCTCTTGGATTCTTCGGTTTCAACAATTCGACTACTCGCCGATATGTCGGAATTTGGTATAACAAAATTCCCGAACGAACCCTCGTTTGGGTTGCCAACAGAAACCAACCCCTCAACGACACCTCCGGAACTCTGTCAATCGACCGTCATGGAAACGTCGTCGTTTTCAGCGCCACACAAACCGTACTCCTTTGGTCCACCAACAATTCGTTCCAATCGCCGAACGAGGTGTCGGTTGTGCTTCAGGATACGGGAAATCTCGCGGTGGTTGAACGAGAGAGCCGAAGGGTTATTTGGCAGAGCTTTGATTATCCGTCTCATGCTCTTCTTCCGTACATGAAATTGGGGCTGAATCTTCGGACCGGGTTCAGTTGGGTTTTAACTTCATGGAAGGCGGAAGACGATCCGGGAACCGGGAATTTCAGTTGCCGGATTGACCCGACCGGGTATCCGCAGCTGATTGTGTACGAAGGGGATGTTCCGTGGTGGCGGGGCGGGTCGTGGACAGGCCGTAGATGGACGGGTGTACCTCAAATGACTAATTCCTTTATAATCACTACATCTTATACTGACAACGATGAAGAGATTTCTCTAATGAACGGTGTAACGGACGATACAATATTAATGAGGATGATTTTGGATGAATCTGGTATTTTGCGTCGCTCCTTATGGATTGAAAAAGAGCAAAGATGGAATGAGTTTTGGACCCCAACCGAGCGGTGCGACAAATACAACCAGTGCGGTCTAAACGGTAACTGCGACCCATACAACACAAACCAATCTCAATGCGATTGCCTCCCCGGCTTCAAACCGCGGTCGGACCGGGATTGGTTCTTGAGAGATCCGTCGGGTGGGTGCGTCAGGAAGAGACCAAACGCCACGTGTCGGAGTGGAGAGGGTTTTGTGAAGGTCCCACGTGTGAAGGTGCCGGACAGTTCAACGGCACGTGCAGACAAGACTATGAGCTTACAAGCTTGCGAACAAGCGTGTTTGAAGGATTGTAACTGCACGGCTTACACGAGCGCAAATGAGACGAGCGGAATCGGGTGCGTGACGTGGTATGGAGATCTGATAGACACGCGGACCTATCCTAACATCGGTCAAGATCTGTATGTCAGAGTTGATGCAGTTGAATTAGCTCAATATGCACAAAAATCAAATCGTCCTTCAACAAAGAAAGTGGTAGCAATTGTCGTTGTGTCCTTTGTTGCATTGTTGTTGCTCGTGACCTCGCTAGTTTACTTATGGGAAATGGCAAAAAAAAGAAGGGAGAGATCGACAAGTTTATCTTATAATTTTGGGGATTCTCCAAATCCAAAGGAATTTGATGAAAGTAGAACAAGCTCAGATTTGCCAGTATTTGACTTGTGTACCATAGCTAACGCAACGGATAATTTTTCTTTTAATAACAAGCTTGGAGAAGGTGGCTTTGGCGCAGTTTTTAAGGGCAAGCTTACAAATGGAGAGGAAATTGCAGTTAAAAGGCTAGCTAAGAACTCAGGGCAAGGAGTTGGAGAGTTCAAGAACGAAGTTAATTTAATTGCAAAGCTCCAACATAGAAATCTCGTCAGAATTTTAGGCTACTGCGTAAAGAATGAAGAGAAAATGCTTGTATATGAATACTTGCCAAACAAAAGCTTGGACACTTTCATTTTTGATGAAAGCAAGAGGGCTTTGCTCAGTTGGAGAAAACGTTTTGAAATCATTTGTGGAGTTGCTCGAGGGATGTTATATCTTCATCAAGATTCAAGATTGAAAATCATCCATCGAGATTTGAAGGCAAGCAATATACTATTAGATGTTGATTTGAATCCCAAAATTGCTGATTTTGGAATGGCAAAAATATTTGGTCAAGATCAAATCCAAGCAAACACGAGTCGCATCGTGGGAACATACGGATATATGTCACCAGAGTACGCAATGGAAGGTCTATTCTCAGTGAAATCAGACGTATATAGCTTCGGAGTTTTAGTGCTAGAGATGATTACGGGCAAAAAAAACACCAGCCATGATTCCTCTTACTTAAACTTGGTCGGACATGTTTGGGAGCTTTGGAAATCGGACAATGCAGTGGAAATAGTGGACTCGAGTTTAGAAGAATCAAGTTATGGACATGAAATCATGAGATGCCTCCAAATTGGGCTATTGTGTGTGCAGGAGGATCCGACAGATCGTCCGACCATGTCGACTGTCGTCTTCATGTTGGGCAATGAAGTGGGTCTTCCTTCTCCAAAGAAACCTGCTTTTATTTTGAAGAGAAAATACACCAGTGGAGATCCATCCACCAGTACTGAAGGAGCCAACTCTGTAAATGACGTAACCATTTCCATAATCCATGCTCGTTAA 2595 44.05 MLQLFCSSKLCCLPINNITIPFRPLCSISNELSTMNPHKWFFFHILLFLTIFVGTHFSLAVDINSTVVIIKDGDPLVSTNKNFALGFFGFNNSTTRRYVGIWYNKIPERTLVWVANRNQPLNDTSGTLSIDRHGNVVVFSATQTVLLWSTNNSFQSPNEVSVVLQDTGNLAVVERESRRVIWQSFDYPSHALLPYMKLGLNLRTGFSWVLTSWKAEDDPGTGNFSCRIDPTGYPQLIVYEGDVPWWRGGSWTGRRWTGVPQMTNSFIITTSYTDNDEEISLMNGVTDDTILMRMILDESGILRRSLWIEKEQRWNEFWTPTERCDKYNQCGLNGNCDPYNTNQSQCDCLPGFKPRSDRDWFLRDPSGGCVRKRPNATCRSGEGFVKVPRVKVPDSSTARADKTMSLQACEQACLKDCNCTAYTSANETSGIGCVTWYGDLIDTRTYPNIGQDLYVRVDAVELAQYAQKSNRPSTKKVVAIVVVSFVALLLLVTSLVYLWEMAKKRRERSTSLSYNFGDSPNPKEFDESRTSSDLPVFDLCTIANATDNFSFNNKLGEGGFGAVFKGKLTNGEEIAVKRLAKNSGQGVGEFKNEVNLIAKLQHRNLVRILGYCVKNEEKMLVYEYLPNKSLDTFIFDESKRALLSWRKRFEIICGVARGMLYLHQDSRLKIIHRDLKASNILLDVDLNPKIADFGMAKIFGQDQIQANTSRIVGTYGYMSPEYAMEGLFSVKSDVYSFGVLVLEMITGKKNTSHDSSYLNLVGHVWELWKSDNAVEIVDSSLEESSYGHEIMRCLQIGLLCVQEDPTDRPTMSTVVFMLGNEVGLPSPKKPAFILKRKYTSGDPSTSTEGANSVNDVTISIIHAR 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83916792 83921892 - Tan0014355.1 Tan05g3187 754495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3187 864 Pfam Domain of unknown function (DUF3403) 821 864 IPR021820 GO:0004674(InterPro)
Tan05g3187 864 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 625 825 - -
Tan05g3187 864 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 61 831 - -
Tan05g3187 864 Gene3D Transferase(Phosphotransferase) domain 1 625 823 - -
Tan05g3187 864 Pfam D-mannose binding lectin 110 214 IPR001480 -
Tan05g3187 864 ProSitePatterns Protein kinases ATP-binding region signature. 555 577 IPR017441 GO:0005524(InterPro)
Tan05g3187 864 CDD PAN_AP_plant 379 457 - -
Tan05g3187 864 ProSiteProfiles PAN/Apple domain profile. 378 458 IPR003609 -
Tan05g3187 864 SMART serkin_6 549 791 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3187 864 Pfam Protein tyrosine and serine/threonine kinase 550 815 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3187 864 Gene3D Phosphorylase Kinase; domain 1 523 624 - -
Tan05g3187 864 ProSiteProfiles Bulb-type lectin domain profile. 61 185 IPR001480 -
Tan05g3187 864 Gene3D - 65 185 IPR036426 -
Tan05g3187 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3187 864 SUPERFAMILY Protein kinase-like (PK-like) 525 818 IPR011009 -
Tan05g3187 864 ProSiteProfiles Protein kinase domain profile. 549 832 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3187 864 CDD STKc_IRAK 555 818 - -
Tan05g3187 864 SUPERFAMILY alpha-D-mannose-specific plant lectins 111 219 IPR036426 -
Tan05g3187 864 Pfam S-locus glycoprotein domain 246 355 IPR000858 GO:0048544(InterPro)
Tan05g3187 864 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 58 185 - -
Tan05g3187 864 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 517 624 - -
Tan05g3187 864 SMART ntp_6 379 457 IPR003609 -
Tan05g3187 864 CDD B_lectin 67 188 IPR001480 -
Tan05g3187 864 PIRSF SRK 33 864 IPR024171 GO:0004674(InterPro)
Tan05g3187 864 Pfam PAN-like domain 378 443 IPR003609 -
Tan05g3187 864 SMART blect_4 67 188 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3187 Tan-Chr5:83916792 Tan05g3193 Tan-Chr5:83983092 1.60E-197 dispersed
Tan05g3187 Tan-Chr5:83916792 Tan05g3188 Tan-Chr5:83916792 0.00E+00 tandem
Tan01g4474 Tan-Chr1:110203536 Tan05g3187 Tan-Chr5:83916792 9.60E-200 wgd
Tan01g1610 Tan-Chr1:16356093 Tan05g3187 Tan-Chr5:83916792 2.40E-170 wgd
Tan02g0283 Tan-Chr2:2432606 Tan05g3187 Tan-Chr5:83916792 8.50E-117 wgd
Tan03g2388 Tan-Chr3:77627159 Tan05g3187 Tan-Chr5:83916792 1.10E-182 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67704 PF07714 PK_Tyr_Ser-Thr 1.80E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3187 - - - 0.0