Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3188 ATGCTTCAACTTTTTTGCAGCTCTAAACTCTGTTGCCTTCCCATTAATAATATAACAATCCCTTTTCGCCCTCTTTGTTCAATTTCCAATGAACTGTCAACCATGAATCCTCACAAATGGTTCTTCTTTCATATATTGTTGTTTTTGACCATTTTTGTTGGCACCCATTTTAGCCTCGCCGTTGATATCAACTCCACGGTTGTTATTATCAAAGATGGAGATCCATTGGTATCCACGAACAAGAATTTCGCTCTTGGATTCTTCGGTTTCAACAATTCGACTACTCGCCGATATGTCGGAATTTGGTATAACAAAATTCCCGAACGAACCCTCGTTTGGGTTGCCAACAGAAACCAACCCCTCAACGACACCTCCGGAACTCTGTCAATCGACCGTCATGGAAACGTCGTCGTTTTCAGCGCCACACAAACCGTACTCCTTTGGTCCACCAACAATTCGTTCCAATCGCCGAACGAGGTGTCGGTTGTGCTTCAGGATACGGGAAATCTCGCGGTGGTTGAACGAGAGAGCCGAAGGGTTATTTGGCAGAGCTTTGATTATCCGTCTCATGCTCTTCTTCCGTACATGAAATTGGGGCTGAATCTTCGGACCGGGTTCAGTTGGGTTTTAACTTCATGGAAGGCGGAAGACGATCCGGGAACCGGGAATTTCAGTTGCCGGATTGACCCGACCGGGTATCCGCAGCTGATTGTGTACGAAGGGGATGTTCCGTGGTGGCGGGGCGGGTCGTGGACAGGCCGTAGATGGACGGGTGTACCTCAAATGACTAATTCCTTTATAATCACTACATCTTATACTGACAACGATGAAGAGATTTCTCTAATGAACGGTGTAACGGACGATACAATATTAATGAGGATGATTTTGGATGAATCTGGTATTTTGCGTCGCTCCTTATGGATTGAAAAAGAGCAAAGATGGAATGAGTTTTGGACCCCAACCGAGCGGTGCGACAAATACAACCAGTGCGGTCTAAACGGTAACTGCGACCCATACAACACAAACCAATCTCAATGCGATTGCCTCCCCGGCTTCAAACCGCGGTCGGACCGGGATTGGTTCTTGAGAGATCCGTCGGGTGGGTGCGTCAGGAAGAGACCAAACGCCACGTGTCGGAGTGGAGAGGGTTTTGTGAAGGTCCCACGTGTGAAGGTGCCGGACAGTTCAACGGCACGTGCAGACAAGACTATGAGCTTACAAGCTTGCGAACAAGCGTGTTTGAAGGATTGTAACTGCACGGCTTACACGAGCGCAAATGAGACGAGCGGAATCGGGTGCGTGACGTGGTATGGAGATCTGATAGACACGCGGACCTATCCTAACATCGGTCAAGATCTGTATGTCAGAGTTGATGCAGTTGAATTAGCTCAATATGCACAAAAATCAAATCGTCCTTCAACAAAGAAAGTGGTAGCAATTGTCGTTGTGTCCTTTGTTGCATTGTTGTTGCTCGTGACCTCGCTAGTTTACTTATGGGAAATGGCAAAAAAAAGAAGGGAGAGATCGACAAGTTTATCTTATAATTTTGGGGATTCTCCAAATCCAAAGGAATTTGATGAAAGTAGAACAAGCTCAGATTTGCCAGTATTTGACTTGTGTACCATAGCTAACGCAACGGATAATTTTTCTTTTAATAACAAGCTTGGAGAAGGTGGCTTTGGCGCAGTTTTTAAGGGCAAGCTTACAAATGGAGAGGAAATTGCAGTTAAAAGGCTAGCTAAGAACTCAGGGCAAGGAGTTGGAGAGTTCAAGAACGAAGTTAATTTAATTGCAAAGCTCCAACATAGAAATCTCGTCAGAATTTTAGGCTACTGCGTAAAGAATGAAGAGAAAATGCTTGTATATGAATACTTGCCAAACAAAAGCTTGGACACTTTCATTTTTGATGAAAGCAAGAGGGCTTTGCTCAGTTGGAGAAAACGTTTTGAAATCATTTGTGGAGTTGCTCGAGGGATGTTATATCTTCATCAAGATTCAAGATTGAAAATCATCCATCGAGATTTGAAGGCAAGCAATATACTATTAGATGTTGATTTGAATCCCAAAATTGCTGATTTTGGAATGGCAAAAATATTTGGTCAAGATCAAATCCAAGCAAACACGAGTCGCATCGTGGGAACATAG 2145 44.24 MLQLFCSSKLCCLPINNITIPFRPLCSISNELSTMNPHKWFFFHILLFLTIFVGTHFSLAVDINSTVVIIKDGDPLVSTNKNFALGFFGFNNSTTRRYVGIWYNKIPERTLVWVANRNQPLNDTSGTLSIDRHGNVVVFSATQTVLLWSTNNSFQSPNEVSVVLQDTGNLAVVERESRRVIWQSFDYPSHALLPYMKLGLNLRTGFSWVLTSWKAEDDPGTGNFSCRIDPTGYPQLIVYEGDVPWWRGGSWTGRRWTGVPQMTNSFIITTSYTDNDEEISLMNGVTDDTILMRMILDESGILRRSLWIEKEQRWNEFWTPTERCDKYNQCGLNGNCDPYNTNQSQCDCLPGFKPRSDRDWFLRDPSGGCVRKRPNATCRSGEGFVKVPRVKVPDSSTARADKTMSLQACEQACLKDCNCTAYTSANETSGIGCVTWYGDLIDTRTYPNIGQDLYVRVDAVELAQYAQKSNRPSTKKVVAIVVVSFVALLLLVTSLVYLWEMAKKRRERSTSLSYNFGDSPNPKEFDESRTSSDLPVFDLCTIANATDNFSFNNKLGEGGFGAVFKGKLTNGEEIAVKRLAKNSGQGVGEFKNEVNLIAKLQHRNLVRILGYCVKNEEKMLVYEYLPNKSLDTFIFDESKRALLSWRKRFEIICGVARGMLYLHQDSRLKIIHRDLKASNILLDVDLNPKIADFGMAKIFGQDQIQANTSRIVGT 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83916792 83921892 - Tan0014355.2 Tan05g3188 754496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3188 714 PIRSF SRK 33 714 IPR024171 GO:0004674(InterPro)
Tan05g3188 714 ProSitePatterns Protein kinases ATP-binding region signature. 555 577 IPR017441 GO:0005524(InterPro)
Tan05g3188 714 Pfam Protein tyrosine and serine/threonine kinase 550 703 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3188 714 Gene3D Phosphorylase Kinase; domain 1 523 624 - -
Tan05g3188 714 Pfam PAN-like domain 378 443 IPR003609 -
Tan05g3188 714 CDD PAN_AP_plant 379 457 - -
Tan05g3188 714 ProSiteProfiles PAN/Apple domain profile. 378 458 IPR003609 -
Tan05g3188 714 Pfam D-mannose binding lectin 110 214 IPR001480 -
Tan05g3188 714 Gene3D - 65 185 IPR036426 -
Tan05g3188 714 SMART serkin_6 549 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3188 714 Pfam S-locus glycoprotein domain 246 355 IPR000858 GO:0048544(InterPro)
Tan05g3188 714 SUPERFAMILY alpha-D-mannose-specific plant lectins 111 219 IPR036426 -
Tan05g3188 714 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 625 714 - -
Tan05g3188 714 ProSiteProfiles Bulb-type lectin domain profile. 61 185 IPR001480 -
Tan05g3188 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3188 714 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 517 624 - -
Tan05g3188 714 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 58 185 - -
Tan05g3188 714 ProSiteProfiles Protein kinase domain profile. 549 714 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3188 714 SMART ntp_6 379 457 IPR003609 -
Tan05g3188 714 SUPERFAMILY Protein kinase-like (PK-like) 525 714 IPR011009 -
Tan05g3188 714 Gene3D Transferase(Phosphotransferase) domain 1 625 714 - -
Tan05g3188 714 CDD B_lectin 67 188 IPR001480 -
Tan05g3188 714 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 61 714 - -
Tan05g3188 714 SMART blect_4 67 188 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3188 Tan-Chr5:83916792 Tan05g3190 Tan-Chr5:83940104 1.10E-154 dispersed
Tan05g3187 Tan-Chr5:83916792 Tan05g3188 Tan-Chr5:83916792 0.00E+00 tandem
Tan05g3188 Tan-Chr5:83916792 Tan05g3189 Tan-Chr5:83935272 1.70E-152 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67705 PF07714 PK_Tyr_Ser-Thr 1.80E-33 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3188 - - - 0.0