Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3189 ATGGGAGAACTGATTTGCAGGTGCAAGCTTTCGACTTTTCTATTTTTCTGGACGACCATAGCTCTGTTTCCAAGAAAATCATTAGCAATCGATAGCATAAAAGCAGGGGAATCCATTAATGGTAGTACCCAGATTTTAGTTTCAGCTGCACAGAACTTTGTGCTGGGAATCTTCAATCCCGAAGGCTCCAAGTTTCAGTATTTGGGAATATGGTACAACAACATCCCACAAACTGTTGTGTGGGTTGCAAACAGAGATAACCCACTTGTAAATTCCTCTGGCAAATTAGCATTCAATGGAGGAAACATTGTTCTTCTCAACGAAACAGGTGGAATTTTATGGTCTTCCACCTCTCCAGAACCAGTGAAACAGCCAGTGGCTCAACTGCTAAACACAGGTAATTTGGTTTTAAAAGAATCAGGGTCTGAAAATTATGCGTGGCAGAGTTTCGATTATCCCTTTGATACTCTGTTACCTGGGATGAAACTTGGTTGGGGCTCGAAAACCGGTCTGAACCGAAAGTTAACTTCTTGGAAAAGTTCAAACGATCCGTCGTCTGGGGATTACACTTACAGCGTGGAAATGGATGGGCTTCCCCAACTTGTAGTTCGCAAAGGACCCATCACGACGTTTCGAGGCGGCCCATGGTATGGTACTAGGTTTAGTGGAAGTGGTCCACTCAGAGAAACCGCAATTTATACTCCAAAGTTCGAGTATAATGCTGATGAACACGAAGCATTCTTTTCATATGATGCTGCGAACAATTTCTCAGTAAGATTGGTGCTGAACGCGGCTGGGTTATTTCAACAGTTGTATTGGGTCGATGATGGAAAATATTGGTACCCTTTGTATACATTGCCAGGAGATCGCTGCGATGTCTATGGACTCTGCGGGGATTTTGGTGTCTGTACATTTTCCCTCACAGCAGAATGTGATTGTATGGCTGGGTTTGAACCCAAATCGCCTGATGATTGGGAAAAATTTAGGTGGTCTGGTGGCTGCGTTAGAAAGGACAATCGAACCTGTGGAAATGGAGAGGGATTTAAGAGAATCAGCAGTGTGAAATTGCCAGATTCTTCAGGGAATTTGGTCAATGTTAATACGAGCATTCAAGACTGCGAGGCAGAGTGCTTGAAAAACTGCTCTTGCTTGGCCTATGGAATAATGGAGCTTCCAACTGGTGGCTATGCCTGTGTTACCTGGTTTCATAAACTGATGGATGTTAAGTTTGTTCTTCAAAATGGACAGGATCTCTATGTGAGAGTGGCGGCTTCGGAATTAGACTCAACCAACAAGAAACTTATGATTGCAATCAGTCTGTCTGTGGCTTCATTTCTAGGCTTCTTGATTTTTGTCATTTGCTTTATTCTTGGGCGTAGTAGGAGAGTTAGAGGTAATGTGATCACTCCTGAGATCACTGCCGGTGATATTCAATCTCAAGAAAATGATGTTGAGATGCCAATCTACGATTTTACAACGATCGAGTCTGCCACAAATAGTTTCTCCTTTTCGAATAAGATAGGTGAAGGCGGTTTTGGTCCTGTATACAAGGGGAAACTTTCATGTGGACAAGAAATTGCAGTGAAGAGGCTGGCAGAAGGCTCTGGCCAAGGGCAAAGTGAGTTCAAAAACGAGGTTTTGCTGATCTCACAGCTTCAACATCGAAATCTTGTCAAGCTTCTTGGTTTCTGCATTCACAAGGAAGAAACATTATTGGTTTATGAATATATGCCAAACAAAAGTTTAGACCACTTCCTCTTCGATAACGGGAGACGATCTTTACTCAATTGGCAACAGAGATTGGATATCATAATTGGAATAGCTCGAGGGATTCTTTATCTCCATCGAGATTCAAGACTAAGAATAATACATAGGGATCTCAAAGTAAGTAATATATTACTTGACAATGAAATGAATCCGAAAATCTCAGACTTTGGTATGGCACGCATGTTTGGGGAAGATCAAACAATGACTAAAACCAAAAGAGTTGTTGGAACCTATGGATATATGTCACCAGAATATGCACTCGATGGATGCTTTTCGTTGAAATCTGATGTCTTTAGCTTTGGGGTCATTCTTTTGGAAATAGTTAGTGGTAAGAAGAATAGAGGCTTCTTCCATACCGATCATCAACTAAATCTTCTTGGACATGCATGGAAGCTTTGGGATGAAGAAAATGCTTTGGAGTTAATGGATGCATCATTGGAGGATCAATTCCAACCTTCTGAAGCACTGCGATGCATTCAAGTAGGCCTTTTGTGTGTGCAACAAAACCCAGATGAAAGGCCAACAATGTGGTCAGTACTTTCAATGTTGGAGACTGAAAACATGTTGTTATCTCATCCTAAACAACCTGGATTTTACACAGAAAGAACATTTTCTAAGACCGATAGATTATCGGCTGAAACCTCGACTTCCAATGAAGTTACAGTCACATCGCTACATGGTCGTTAG 2454 41.69 MGELICRCKLSTFLFFWTTIALFPRKSLAIDSIKAGESINGSTQILVSAAQNFVLGIFNPEGSKFQYLGIWYNNIPQTVVWVANRDNPLVNSSGKLAFNGGNIVLLNETGGILWSSTSPEPVKQPVAQLLNTGNLVLKESGSENYAWQSFDYPFDTLLPGMKLGWGSKTGLNRKLTSWKSSNDPSSGDYTYSVEMDGLPQLVVRKGPITTFRGGPWYGTRFSGSGPLRETAIYTPKFEYNADEHEAFFSYDAANNFSVRLVLNAAGLFQQLYWVDDGKYWYPLYTLPGDRCDVYGLCGDFGVCTFSLTAECDCMAGFEPKSPDDWEKFRWSGGCVRKDNRTCGNGEGFKRISSVKLPDSSGNLVNVNTSIQDCEAECLKNCSCLAYGIMELPTGGYACVTWFHKLMDVKFVLQNGQDLYVRVAASELDSTNKKLMIAISLSVASFLGFLIFVICFILGRSRRVRGNVITPEITAGDIQSQENDVEMPIYDFTTIESATNSFSFSNKIGEGGFGPVYKGKLSCGQEIAVKRLAEGSGQGQSEFKNEVLLISQLQHRNLVKLLGFCIHKEETLLVYEYMPNKSLDHFLFDNGRRSLLNWQQRLDIIIGIARGILYLHRDSRLRIIHRDLKVSNILLDNEMNPKISDFGMARMFGEDQTMTKTKRVVGTYGYMSPEYALDGCFSLKSDVFSFGVILLEIVSGKKNRGFFHTDHQLNLLGHAWKLWDEENALELMDASLEDQFQPSEALRCIQVGLLCVQQNPDERPTMWSVLSMLETENMLLSHPKQPGFYTERTFSKTDRLSAETSTSNEVTVTSLHGR 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83935272 83938626 - Tan0007319.1 Tan05g3189 754497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3189 817 CDD B_lectin 39 153 IPR001480 -
Tan05g3189 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3189 817 Gene3D Transferase(Phosphotransferase) domain 1 577 784 - -
Tan05g3189 817 SMART blect_4 37 153 IPR001480 -
Tan05g3189 817 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Tan05g3189 817 SMART ntp_6 343 422 IPR003609 -
Tan05g3189 817 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544(InterPro)
Tan05g3189 817 SUPERFAMILY Protein kinase-like (PK-like) 483 774 IPR011009 -
Tan05g3189 817 ProSiteProfiles Protein kinase domain profile. 501 779 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3189 817 Gene3D Phosphorylase Kinase; domain 1 470 576 - -
Tan05g3189 817 MobiDBLite consensus disorder prediction 798 817 - -
Tan05g3189 817 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Tan05g3189 817 Gene3D - 27 150 IPR036426 -
Tan05g3189 817 CDD PAN_AP_plant 339 423 - -
Tan05g3189 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 184 IPR036426 -
Tan05g3189 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Tan05g3189 817 SMART serkin_6 501 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3189 817 PIRSF SRK 3 817 IPR024171 GO:0004674(InterPro)
Tan05g3189 817 CDD STKc_IRAK 507 773 - -
Tan05g3189 817 Pfam Domain of unknown function (DUF3403) 774 817 IPR021820 GO:0004674(InterPro)
Tan05g3189 817 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Tan05g3189 817 Pfam D-mannose binding lectin 78 179 IPR001480 -
Tan05g3189 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 576 - -
Tan05g3189 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 30 787 - -
Tan05g3189 817 Pfam PAN-like domain 342 408 IPR003609 -
Tan05g3189 817 Pfam Protein tyrosine and serine/threonine kinase 502 771 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0835 Tan-Chr5:6428762 Tan05g3189 Tan-Chr5:83935272 3.70E-132 dispersed
Tan05g3189 Tan-Chr5:83935272 Tan05g3193 Tan-Chr5:83983092 0.00E+00 dispersed
Tan08g0332 Tan-Chr8:2927315 Tan05g3189 Tan-Chr5:83935272 2.20E-97 dispersed
Tan05g3188 Tan-Chr5:83916792 Tan05g3189 Tan-Chr5:83935272 1.70E-152 tandem
Tan05g3189 Tan-Chr5:83935272 Tan05g3190 Tan-Chr5:83940104 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67706 PF07714 PK_Tyr_Ser-Thr 2.30E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3189 - - - 0.0