Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3190 ATGAGAAAACTGATCTGCGGGTGCAAGCTTTCGGCTGTTCTCTTTCTCTGGACGACCATAGCTCTGTTTCCAAGAAAATCCTTAGCAATCGATAGCATAAAAGCATGGGAATCCATTAATGGTAGTAATCTGATGTTAATTTCAGCTAAACAGAACTTTGTGTTGGGAATCTTCAATCCCCAAGGCTCCAAATTTCAGTATTTGGGAATATGGTACAACAACATTCCACAAACTGTCGTATGGGTAGCAAACAGAGATAACCCACTTGTAAATTCCACTGGCAGATTAACATTCAACAAAGAAGGAAACATTATTCTTGACGATGAAACAGGTGGAGGAGTTTTATGGTCTTCCACTTCTCCAGAATTGGTAAAACAACCAGTGGCTCAGCTGCTAGATACAGGCAATTTGGTTTTAAAAGAATCAGGGTCTGAAAATTATGTGTGGCAGAGTTTCAATTATCCCTCTGATACTCTGTTACCTGGGATGAAACTCGGTTGGGACTTGACAACCGGCCTGAACCGGAAGTTAACGTCGTGGAAAAGCTCAAACGATCCGTCGTCAGGGGAGTTCAGTTACGGTGTGGACAGGGATGGGCTTCCCCAATTGGTAACTCACAAAGGAACCATCACGATGTTTCGGGGCGGCCCATGGTACGGTACAAGATTTAGCGGTAGCCCTCCTATCAGAGATAATCCAATATATATTACCAAGTTTGAATATGGAATCCACGAAATTACCTATTCATATGCTGCTGCGGACAATTTCACTGTAAGATTTGTACTTGAGGCGTCTGGGGAATTTAAACAATTTTATTGGGCTGATGATGGAAAATATTGGCACTTTTTGTATAAAAGGCCTGGAGACAGCTGCGACGACTACGGATTATGTGGAGATTTTGGTGTTTGTACATTTTCCGTCGCATCACAATGCAAATGTATGGATGGGTTTCAGCCCAAATCGCCTGATGATTGGGAAAAAAAGTTAAAGTGGTCTGATGGCTGCGTTAGAAGGGACAATCGAACTTGCAAAAATGGGGAGGGATTCAAAAGAATCAGCGGTGTAAAATTGCCAGATTCTTCAGGGGATTTGGTCAATGTTAATATGACCATTCCAGACTGCAAGGCAGCGTGCTTGAACGACTGCTCTTGCTTGGCTTATGGAATAATGGAAGTTCCCACAGGCGGTTATGGCTGCGTCACTTGGTTTAAAAAATTGATGGATGTTAGAACTGTTCTTGAAAACGGACAGGATATCTATGTGAGAGTAGCGGCTTCAGAATTAGACTCAGGCAAGAGGAAGCTTATAGTTGTGCTTAGCGTGTCTATGGCTTCACTGATAGGCTTCTTGGTTTTAGTCGTTTGCTTTGTTCTGTGGCGTAGAAGGAAAGTTGGAGGTAATGAGATCATTGTAGGTGAGATTCAATCTCAAGAGAACGAAATTGAGATGCCACTTTATGATTTTACTGAGATCGAGACTGCCACAAATAATTTCTCCTTTTCTAATAAGATAGGCGAAGGTGGTTTTGGTCCTGTATACAGGGGAAAGCTTTCATGTGGACAAGAAATTGCAGTAAAAAGACAGGCAGAGGGTTCTGGCCAAGGACTAAGCGAGTTCAAAAATGAGGTCCTGTTGATATCCAAACTTCAACATCGAAATCTTGTCAAGCTGCTCGGTTTCTGCATCCATCAAGAAGAAACATTGCTGGTCTATGAATATATGCCAAACAAAAGTTTAGACTACTTCCTCTTCGATAACAAGAAGCGATCTTTACTCAGCTGGAAAAAGAGATTAGATATCATAATTGGAATAGCTCGAGGGCTTCTTTATCTCCATAGAGATTCAAGGCTTATAATTATACATAGAGATCTTAAAGTGAGTAACATATTACTTGATAATGAAATGAATCCAAAAATTTCAGACTTTGGTATGGCACGTATGTTCACTGAAGATCAAACTATGACAAAAACCAGAAGAGTTGTTGGGACCTATGGTTATATGTCTCCGGAATATGCAATCGATGGATATTTTTCATTGAAATCTGATATCTTTAGCTTTGGAGTTATTCTTTTGGAAATAGTTAGTGGTAAGAAAAATAGAGGCTTCTTCCATCCAGACCATCAACTAAATCTTCTTGGACATGCATGGAAGCTTTGGGATGAAGGAAAAGCTTTGGAATTAATGGATGAAACATTGAAGGATGAATTCCAAAACTCTGAAGCCCTTCGTTGCATTCAAGTAGGACTTTTGTGTGTTCAAGAGAATCCAGAGGAAAGGCCAACTATGTGGTCAGTACTTTCAATGTTAGAGAGTGAAAATATGTTATTATCTCATCCTAAACGACCTGGATTCTACACACAAAGAATGGTTTCTAAGACTCACAAACCGGCTGAAACCTCCAGTTCCAATGAAGTGACCGTTACACTGCTACAAGGTCGATAG 2442 40.66 MRKLICGCKLSAVLFLWTTIALFPRKSLAIDSIKAWESINGSNLMLISAKQNFVLGIFNPQGSKFQYLGIWYNNIPQTVVWVANRDNPLVNSTGRLTFNKEGNIILDDETGGGVLWSSTSPELVKQPVAQLLDTGNLVLKESGSENYVWQSFNYPSDTLLPGMKLGWDLTTGLNRKLTSWKSSNDPSSGEFSYGVDRDGLPQLVTHKGTITMFRGGPWYGTRFSGSPPIRDNPIYITKFEYGIHEITYSYAAADNFTVRFVLEASGEFKQFYWADDGKYWHFLYKRPGDSCDDYGLCGDFGVCTFSVASQCKCMDGFQPKSPDDWEKKLKWSDGCVRRDNRTCKNGEGFKRISGVKLPDSSGDLVNVNMTIPDCKAACLNDCSCLAYGIMEVPTGGYGCVTWFKKLMDVRTVLENGQDIYVRVAASELDSGKRKLIVVLSVSMASLIGFLVLVVCFVLWRRRKVGGNEIIVGEIQSQENEIEMPLYDFTEIETATNNFSFSNKIGEGGFGPVYRGKLSCGQEIAVKRQAEGSGQGLSEFKNEVLLISKLQHRNLVKLLGFCIHQEETLLVYEYMPNKSLDYFLFDNKKRSLLSWKKRLDIIIGIARGLLYLHRDSRLIIIHRDLKVSNILLDNEMNPKISDFGMARMFTEDQTMTKTRRVVGTYGYMSPEYAIDGYFSLKSDIFSFGVILLEIVSGKKNRGFFHPDHQLNLLGHAWKLWDEGKALELMDETLKDEFQNSEALRCIQVGLLCVQENPEERPTMWSVLSMLESENMLLSHPKRPGFYTQRMVSKTHKPAETSSSNEVTVTLLQGR 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83940104 83943439 - Tan0008321.1 Tan05g3190 754498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3190 813 Gene3D Transferase(Phosphotransferase) domain 1 574 780 - -
Tan05g3190 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Tan05g3190 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 573 - -
Tan05g3190 813 SMART serkin_6 498 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3190 813 Pfam D-mannose binding lectin 78 181 IPR001480 -
Tan05g3190 813 MobiDBLite consensus disorder prediction 792 813 - -
Tan05g3190 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 35 784 - -
Tan05g3190 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3190 813 Gene3D - 28 153 IPR036426 -
Tan05g3190 813 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Tan05g3190 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 186 IPR036426 -
Tan05g3190 813 Gene3D Hepatocyte Growth Factor 339 422 - -
Tan05g3190 813 Pfam Protein tyrosine and serine/threonine kinase 499 768 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3190 813 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3190 813 Pfam PAN-like domain 343 409 IPR003609 -
Tan05g3190 813 CDD PAN_AP_plant 340 424 - -
Tan05g3190 813 CDD STKc_IRAK 504 770 - -
Tan05g3190 813 CDD B_lectin 53 155 IPR001480 -
Tan05g3190 813 Gene3D Phosphorylase Kinase; domain 1 467 573 - -
Tan05g3190 813 SMART ntp_6 344 423 IPR003609 -
Tan05g3190 813 SUPERFAMILY Protein kinase-like (PK-like) 478 770 IPR011009 -
Tan05g3190 813 PIRSF SRK 2 813 IPR024171 GO:0004674(InterPro)
Tan05g3190 813 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544(InterPro)
Tan05g3190 813 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Tan05g3190 813 Pfam Domain of unknown function (DUF3403) 771 813 IPR021820 GO:0004674(InterPro)
Tan05g3190 813 SMART blect_4 37 155 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3188 Tan-Chr5:83916792 Tan05g3190 Tan-Chr5:83940104 1.10E-154 dispersed
Tan05g3190 Tan-Chr5:83940104 Tan05g3193 Tan-Chr5:83983092 0.00E+00 dispersed
Tan05g3194 Tan-Chr5:83993183 Tan05g3190 Tan-Chr5:83940104 1.60E-68 dispersed
Tan11g1730 Tan-Chr11:17405587 Tan05g3190 Tan-Chr5:83940104 1.70E-71 dispersed
Tan05g3189 Tan-Chr5:83935272 Tan05g3190 Tan-Chr5:83940104 0.00E+00 tandem
Tan05g3190 Tan-Chr5:83940104 Tan05g3191 Tan-Chr5:83952597 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67707 PF07714 PK_Tyr_Ser-Thr 8.50E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3190 - - - 0.0