Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3192 ATGGCAAAAGCAAAACTGATTTGCAGGTGCAGGCTTTTGGATTTTTTCTTCCTCTGCATGACCATAGCTCTGTTTCCAAGAAAATCATTAGCAATCGATAGCATAAAAGCAGGGGAATCCATCAATGGTAGCACCCAGATATTAGTGTCAGCTAAACAGAACTTTGTGTTGGGAATCTTCACCCCCCAAAGCTCCAAATTTCGGTATTTGGGAATATGGTACAACAACATCCGACAGACTGTTGTGTGGGTAGCAAATAGAGATAACCCACTTGTAAATTCCTCTGGCAGATTAACATTCAATGGAGGAAACCTCGTTCTTCTGAATGAAAGAGGTGGAATTCTATGGTCTTCCACTCCTTCAATATTAGTGAATGAGCCAGTGGCTCAGTTACTAGATACAGGTAATTTAGTGTTAAGAGAATCTGGATTTGAAAATGAGGTGTGGCAGAGTTTTGATTATCCCTCTGATACTCTGTTACCTGGCATGAAACTGGGTTGGGACTTGGAAACAGGCCTGAACCGGAAATTAACGTCGTGGAAAAGCTCACAGAATCCGTCGTCTGGGGACTTCACCTACGGTGTGGACCTTGATGGGCTTCCCCAATTTGTAATTCGCGTCAGGGCCATCACGAGGTTTCGGGGCGGCCCATGGTACGGTACAAGGTTTAATGATAGTCCTCTAAGCGATACTTCAATTTATTCTCCGAAGCTTGTTAATACAGTCGACGAAGTATTCTTTTCATATGATGCTGCGAACAATCTCATTGTAAGATTTACACTAAACGCAACTGGGTCATTTCAACAATTATATTGGGACAATGGTAGAAAAGATTGGTACATTTTGTATACGTTGCCAGGAGACCGCTGCGACAACTATGGACTCTGCGGAGATTTTGGTTTTTGTACATCTTCCCTCAGTACACCACAATGCTATTGCATGGCTGGGTTTCAACCCAAATCGCCCCAAGATTGGGAAAAGCGTGGCTGGTCAGATGGCTGCGTCAGAAAGGACAGCCGAATATGCAGAAATGGAGAGGGATTTAAAAGAATCAGCAGTGTGAAATTGCCAGATTCTTCAGGATATTTGGTGAATATTAATACGAGCATTCAAGACTGCTTGGTGGCGTGCTTAAAGAACTGCTCTTGCTTGGCCTTCGGATTAATGGAAAATCCCAAAGGCTATGGCTGCGTCACCTGGTTTCAGAAATTGATGGATGTTAGATTTGTTCCTGAAAATGGACAGGATCTCTATGTGAGAGTGGCAGCTTCTGAATTTGGTTCGAGTAACACGAACCTTATAATTGGGCTTAGTGTGTCTGCGACTTCACTGATAAGCTTCTTGGTTTTAGTTGTTTGCTTTATCCTATGGCGTAGAAGGAAAGTTGAAGGTAATGATATCACTAAAAGTGAGATTCAGTTTCAAGAGAACAAAGTTGAGATGCCATTCTATGATTTTACTAACATCCAGACTGCTACAAATAGTTTTTCTTTTTCTAATAAGATAGGCGAAGGTGGTTTTGGTCCTGTATACAAGGGAAAGCTTCCATGTGGACAAGAAATTGCAGTAAAAAGACTAGCAAAAGGTTCCGGCCAAGGGCAAAGCGAGTTCAAAAATGAGGTCTTGTTGATCTCTAAACTTCAACATCGAAATCTTGTTAAGCTGCTCGGGTTCTGCATTCATCAAGAAGAAACATTGCTGGTCTATGAATATATGCCAAACAAAAGTCTTGACTACTTCCTCTTTGATAACAAGAAGCGATCTTTACTCAATTGGAAAAAAAGATTGGATATCATAATTGGAATAGCTCGAGGACTTCTTTATCTCCACAGGGATTCAAGGCTTATAATTATACATAGGGATCTCAAAGTGAGTAACATATTACTTGATAATGAAATGAATCCAAAAATTTCAGACTTTGGTATGGCACGCATGTTTGCAGAAGATCAAACTATGACAAAGACCAAAAGAGTTGTTGGGACCTATGGTTATATGTCTCCAGAATATGCAATCGATGGATATTTTTCATTGAAATCTGATATCTTTAGTTTTGGAGTAATTCTTTTGGAAATAGTTAGTGGTAAGAAAAATAGAGGCTTCTTCCATCCAGACCATCAACTAAATCTTCTTGGACATGCATGGAAGCTTTGGGATGAAGGGAAAGCTTTGGAATTAATGGATGAAACATTGAAGGATCAGTTCCAAAACTCTGAAGCCCTGCGATGCATTCAGGTAGGCCTTTTGTGCGTTCAAGAGAATCCAGATGAAAGACCAATTATGTGGTCAGTACTTTCAATGTTAGAGAATGAAAATATGTTATTATCTCATCCTAAACAACCTGGATTCTTCACACAAAGAATTGTTTCTAATACTCATAAATTACCAGTCGAAGCCCCAACTTCCTTTAAACTGACCTTTACACAGCTACAAGGGCGTTAG 2439 40.3 MAKAKLICRCRLLDFFFLCMTIALFPRKSLAIDSIKAGESINGSTQILVSAKQNFVLGIFTPQSSKFRYLGIWYNNIRQTVVWVANRDNPLVNSSGRLTFNGGNLVLLNERGGILWSSTPSILVNEPVAQLLDTGNLVLRESGFENEVWQSFDYPSDTLLPGMKLGWDLETGLNRKLTSWKSSQNPSSGDFTYGVDLDGLPQFVIRVRAITRFRGGPWYGTRFNDSPLSDTSIYSPKLVNTVDEVFFSYDAANNLIVRFTLNATGSFQQLYWDNGRKDWYILYTLPGDRCDNYGLCGDFGFCTSSLSTPQCYCMAGFQPKSPQDWEKRGWSDGCVRKDSRICRNGEGFKRISSVKLPDSSGYLVNINTSIQDCLVACLKNCSCLAFGLMENPKGYGCVTWFQKLMDVRFVPENGQDLYVRVAASEFGSSNTNLIIGLSVSATSLISFLVLVVCFILWRRRKVEGNDITKSEIQFQENKVEMPFYDFTNIQTATNSFSFSNKIGEGGFGPVYKGKLPCGQEIAVKRLAKGSGQGQSEFKNEVLLISKLQHRNLVKLLGFCIHQEETLLVYEYMPNKSLDYFLFDNKKRSLLNWKKRLDIIIGIARGLLYLHRDSRLIIIHRDLKVSNILLDNEMNPKISDFGMARMFAEDQTMTKTKRVVGTYGYMSPEYAIDGYFSLKSDIFSFGVILLEIVSGKKNRGFFHPDHQLNLLGHAWKLWDEGKALELMDETLKDQFQNSEALRCIQVGLLCVQENPDERPIMWSVLSMLENENMLLSHPKQPGFFTQRIVSNTHKLPVEAPTSFKLTFTQLQGR 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83974399 83977576 - Tan0010566.1 Tan05g3192 754500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3192 812 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Tan05g3192 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 782 - -
Tan05g3192 812 SMART blect_4 39 155 IPR001480 -
Tan05g3192 812 SMART serkin_6 496 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3192 812 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544(InterPro)
Tan05g3192 812 ProSiteProfiles Protein kinase domain profile. 496 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3192 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 571 - -
Tan05g3192 812 CDD STKc_IRAK 502 769 - -
Tan05g3192 812 SMART ntp_6 343 421 IPR003609 -
Tan05g3192 812 PIRSF SRK 4 812 IPR024171 GO:0004674(InterPro)
Tan05g3192 812 Gene3D - 29 152 IPR036426 -
Tan05g3192 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 186 IPR036426 -
Tan05g3192 812 SUPERFAMILY Protein kinase-like (PK-like) 480 790 IPR011009 -
Tan05g3192 812 Gene3D Transferase(Phosphotransferase) domain 1 572 779 - -
Tan05g3192 812 CDD B_lectin 41 155 IPR001480 -
Tan05g3192 812 CDD PAN_AP_plant 343 422 - -
Tan05g3192 812 ProSiteProfiles EGF-like domain profile. 286 323 IPR000742 -
Tan05g3192 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3192 812 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Tan05g3192 812 Gene3D Phosphorylase Kinase; domain 1 457 571 - -
Tan05g3192 812 Pfam Protein tyrosine and serine/threonine kinase 497 765 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3192 812 Pfam PAN-like domain 342 407 IPR003609 -
Tan05g3192 812 Pfam D-mannose binding lectin 80 181 IPR001480 -
Tan05g3192 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 775 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3192 Tan-Chr5:83974399 Tan11g2173 Tan-Chr11:56792933 1.10E-174 dispersed
Tan05g3191 Tan-Chr5:83952597 Tan05g3192 Tan-Chr5:83974399 0.00E+00 tandem
Tan05g3192 Tan-Chr5:83974399 Tan05g3193 Tan-Chr5:83983092 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67709 PF07714 PK_Tyr_Ser-Thr 1.70E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3192 - - - 0.0