Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3193 ATGGCAAAGCCGATTTTCAGGTGCAGGCTTTTGGCTTTCTTCTTCTTCTGGACGACCATAGCTCTGTTTTCAAGACCATCATTAGCAATTGATACAATAAAAGCAGGGGAATCCATCAATGGTAGCACCCAGATTTTAGTTTCAGCTAAACAGAACTTTGTGTTGGGAATGTTCAATCCCCAAGGCTCCAAATTTCAGTATTTGGGAATATGGTACAACAACATCCCACAGACTGTTGTGTGGGTAGCAAACAGAGACAACCCACTTCTAAATTCCTCTGCCAGATTAACATTCAATGAAGAAGGAAACGTAATCCTTCTCAATGAAACAGGTGGAGATTTATGGTCTTCCACTTCTCCAGGGACAGTGAAACAGCCAGTGGCTCAGCTGCTTGATACAGGCAATTTGGTTTTAAAAGAATCAGGGTCTGAAAATTACGTGTGGCAGAGTTTCAATTATCCTTCTGATACTCTGTTACCCGGCATGAAACTCGGTTGGGACTTGAAAACCGGCCTGAACCGGAAGTTAAAGTCTTGGAAAAGCTCAAACGATCCGTCGTCTGGGGATTTCACTTACAGCGTTGAAATGGATGGGCTTCCCCAACTTGTAGTTCACAAAGGACCCATCACAACGTACCGGGGCGGCCCATGGTACGGTGATAGGTTTAGCGGTAGTAATCCACTCAGAGATACCACAATTTACTCTCCCAAGTTCGAATATGGACCCGACGAAGTAACCTATTCTTACTCTGCTACAAGCAGTCTCATTGTAAGACTTGCTCTGAACCCAGCTGGGACATTTCAACAATTTTATTGGGACGATGGTAGAAAAGATTGGTATGCTATGTACACACTGCCAGGAGATCGCTGCGACGACTATGGACTCTGTGGGGATTTTGGTGTTTGTACATTTTCCCTCACACCACAATGCAATTGTATGGCTGGGTTTCAGCCCAAATCGCCAGATGATTGGGAAAAGTTTAGGTGGTCTGATGGCTGCGTTAGAAGGGACAATCAAATCTGCAGAAATGGAGAGGGGTTTAAAAGAATCAGCAATGTGAAATTGCCAGATTCTTCAGGGTATTTGGTGAATGTTAATACGAGCATTCATGACTGTGAGGCCGCGTGCTTGAACAACTGCACTTGCTTGGCCTTTGGAATAATGGAACTTTCCACAGGTGGGTATGGCTGCGTCACTTGGTTTCAGAAATTGATGGATGTTAGATTTGTTCCTGAAGATGGACAGGATATCTATGTCAGAGTGGCGGCTTCAGAATTAGACTCGAGTAAAAGGAAGCTTATAGTTGTGCTTAGTGTGTCTGTGGCTTCACTGATAGGCTTCTCGGTTTTAGTCGTTTGCTTTGTTCTGTGGCGTAGAAGGAAATTTGGAGGTAATGAGATCACTGCTGGTGAAATTCAATATGAAGAGAATGAAGTAGAGATGCCACTCTATGATTTTACTACGATTGAGATTGCCACAAATAATTTTTCCTTTTCCAATAAGCTTGGCGAAGGGGGTTTTGGTCCTGTATACAAGGGAAAGCTCCCATGTGGACAAGAAATTGCAGTAAAAAGGCTAGCAGAGGGCTCTGGTCAAGGGAAAAGCGAGTTCAAAAATGAGGTTTGGTTGATTTCCCAACTTCAACATCGAAATCTTGTCAAGCTGCTTGGTTTCTGCATTAATCAAGAAGAAACTTTACTGGTTTATGAATATATGCCCAACAAAAGTCTAGACTACTTCCTCTTTGATAATGAGAGGCGATCATTACTCAACTGGCAAAAGAGATTGGATATCATAATTGGGATAGCTCGAGGACTTCTTTATCTCCATAGAGATTCAAGGCTTAGAATAATACATCGAGATCTTAAAGTGAGTAATATATTACTAGACAATGAAATGAATCCAAAAATTTCAGACTTTGGAATGGCACGCATGTTCGCTGAGGACCAAACTATGACAAAAACCCAAAGAGTTGTTGGGACCTTTGGCTATATGTCTCCAGAATATGCACTCGATGGATGTTTTTCATTGAAATCGGATGTGTTTAGCTTTGGAGTTATTCTTTTGGAAATAGTTAGTGGTAAGAAGAATAGAGGCTTCTTTCACCCGGATCATCAACTAAATCTTCTTGGACATGCATGGAAGCTTTGGGATGAAGGAAATGCTTTGGAATTAATGGATGCAGCATTGGAGAATCAATTTCAACCTTCTGAAGCACTGCGATGCATTCAAGTAGGCCTTTTGTGTGTTCAACAGAACCCAGAAGAAAGGCCAACAATGTGGTCAGTACTTTCAATGTTGGAGAGTGAAAACATGTTGTTATCTCATCCTAAACAACCTGGATTTTACACAGAGAGAATGGTTTTGAAGACTGATAAATTATCGACTGAAATCTCCACTTCCAATGAAGTGACGGTCACATTGCTACATGGTCGTTAG 2439 41.94 MAKPIFRCRLLAFFFFWTTIALFSRPSLAIDTIKAGESINGSTQILVSAKQNFVLGMFNPQGSKFQYLGIWYNNIPQTVVWVANRDNPLLNSSARLTFNEEGNVILLNETGGDLWSSTSPGTVKQPVAQLLDTGNLVLKESGSENYVWQSFNYPSDTLLPGMKLGWDLKTGLNRKLKSWKSSNDPSSGDFTYSVEMDGLPQLVVHKGPITTYRGGPWYGDRFSGSNPLRDTTIYSPKFEYGPDEVTYSYSATSSLIVRLALNPAGTFQQFYWDDGRKDWYAMYTLPGDRCDDYGLCGDFGVCTFSLTPQCNCMAGFQPKSPDDWEKFRWSDGCVRRDNQICRNGEGFKRISNVKLPDSSGYLVNVNTSIHDCEAACLNNCTCLAFGIMELSTGGYGCVTWFQKLMDVRFVPEDGQDIYVRVAASELDSSKRKLIVVLSVSVASLIGFSVLVVCFVLWRRRKFGGNEITAGEIQYEENEVEMPLYDFTTIEIATNNFSFSNKLGEGGFGPVYKGKLPCGQEIAVKRLAEGSGQGKSEFKNEVWLISQLQHRNLVKLLGFCINQEETLLVYEYMPNKSLDYFLFDNERRSLLNWQKRLDIIIGIARGLLYLHRDSRLRIIHRDLKVSNILLDNEMNPKISDFGMARMFAEDQTMTKTQRVVGTFGYMSPEYALDGCFSLKSDVFSFGVILLEIVSGKKNRGFFHPDHQLNLLGHAWKLWDEGNALELMDAALENQFQPSEALRCIQVGLLCVQQNPEERPTMWSVLSMLESENMLLSHPKQPGFYTERMVLKTDKLSTEISTSNEVTVTLLHGR 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 83983092 83986247 - Tan0021629.1 Tan05g3193 754501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3193 812 CDD STKc_IRAK 502 768 - -
Tan05g3193 812 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Tan05g3193 812 Gene3D Phosphorylase Kinase; domain 1 464 571 - -
Tan05g3193 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 782 - -
Tan05g3193 812 FunFam Receptor-like serine/threonine-protein kinase SD1-8 26 151 - -
Tan05g3193 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 571 - -
Tan05g3193 812 SMART serkin_6 496 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3193 812 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544(InterPro)
Tan05g3193 812 Pfam D-mannose binding lectin 78 180 IPR001480 -
Tan05g3193 812 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Tan05g3193 812 CDD PAN_AP_plant 338 422 - -
Tan05g3193 812 SMART blect_4 37 154 IPR001480 -
Tan05g3193 812 CDD B_lectin 39 154 IPR001480 -
Tan05g3193 812 Pfam Domain of unknown function (DUF3403) 769 812 IPR021820 GO:0004674(InterPro)
Tan05g3193 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 775 - -
Tan05g3193 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 185 IPR036426 -
Tan05g3193 812 Pfam Protein tyrosine and serine/threonine kinase 497 766 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3193 812 SUPERFAMILY Protein kinase-like (PK-like) 478 768 IPR011009 -
Tan05g3193 812 ProSiteProfiles Protein kinase domain profile. 496 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3193 812 Gene3D Transferase(Phosphotransferase) domain 1 572 779 - -
Tan05g3193 812 SMART ntp_6 342 421 IPR003609 -
Tan05g3193 812 Pfam PAN-like domain 341 407 IPR003609 -
Tan05g3193 812 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Tan05g3193 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3193 812 PIRSF SRK 2 812 IPR024171 GO:0004674(InterPro)
Tan05g3193 812 Gene3D - 27 152 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4474 Tan-Chr1:110203536 Tan05g3193 Tan-Chr5:83983092 1.00E-217 dispersed
Tan05g3187 Tan-Chr5:83916792 Tan05g3193 Tan-Chr5:83983092 1.60E-197 dispersed
Tan05g3189 Tan-Chr5:83935272 Tan05g3193 Tan-Chr5:83983092 0.00E+00 dispersed
Tan05g3190 Tan-Chr5:83940104 Tan05g3193 Tan-Chr5:83983092 0.00E+00 dispersed
Tan05g3191 Tan-Chr5:83952597 Tan05g3193 Tan-Chr5:83983092 0.00E+00 dispersed
Tan05g3193 Tan-Chr5:83983092 Tan11g2173 Tan-Chr11:56792933 1.40E-179 dispersed
Tan05g3192 Tan-Chr5:83974399 Tan05g3193 Tan-Chr5:83983092 0.00E+00 tandem
Tan05g3193 Tan-Chr5:83983092 Tan05g3194 Tan-Chr5:83993183 1.90E-66 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67710 PF07714 PK_Tyr_Ser-Thr 5.90E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3193 - - - 0.0