Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3265 ATGAATTGCTTCTGCTTCGGGTCCTCTACTTTGGAGAAGAAACGGATCTCTACTCGTGCTGATAAGGATTTGGACATTGACTTGCTTGAGAATGTTAAACAATTCTCCTTCAATGAATTAAGATCTGCTACAGAGGATTTCCATTCGAACAATAGAATTGGGCGTGGAGGGTTTGGAACTGTTTACAAGGGCACATTAAGGAGTGGAGTACAAGTTGCGGTAAAGAAACTTTCTATAGAGTCTAAGCAAGGGGCTCAGGAATTTTTGACAGAGATCAAAACCATTTCAAATGTCAGGCATCCAAACCTTGTTGAGTTGATTGGATGCTGTTCTCAAAAAGCTAACCGGATCTTGGTCTATGAATATCTGGAAAATAATAGTCTCGACCATGCCTTGTTAGATTATAAGAATACAAGTGTCGAACTGGATTGGGGGAAGAGGTCCTCTATTTGCATTGGTACTGCTAGGGGCCTTCAATTTCTTCACGAGGAAGTTATTCCACATATTGTGCATAGAGATATCAAGGCTAGTAATATACTCCTTGATAAGGACTTCAATCCGAAAATTGGCGACTTTGGATTAGCTAAACTTTTCCCAGATGATATTACTCACATTAGCACAAGAATTGCAGGAACAACTGGTTATTTGGCTCCAGAGTATGCACTGGGAGGTCAGCTAACTCTGAAGGCAGATGTATATAGCTTTGGAATCCTCATCCTTGAAATAGTTAGTGGTAGACGTAGCAGTACAGTTTTTGCGGGAGAAATACCAATGCTCTTGCTGGAACGGGTGTGGGAGTTATATGAAGGAGGAAAACTTTTAGATATAGTGGATTCTAGACTAGGAGATTATCCTCAAGAAGAAGTGCTTAGGTACATGAAAGTGGCTCTTTTCTGCACACAAGCAGCTGCAAATCGACGGCCAGTGATGAGTCAAGTCGTTAACATGCTTACAAAAAAAATAAAGCTTAACGAGAAGCTACTTACCGCCCCAGGGTTCTACGGAGGCTCGAGTGACAATCCTGCAAGCAAGAAAACCTCCAGCACTTCCACTAGCAACGAGGTATGCTCCGCAGTCGTCTCTATAACTCAAATCACCCCCAGATGA 1107 42.1 MNCFCFGSSTLEKKRISTRADKDLDIDLLENVKQFSFNELRSATEDFHSNNRIGRGGFGTVYKGTLRSGVQVAVKKLSIESKQGAQEFLTEIKTISNVRHPNLVELIGCCSQKANRILVYEYLENNSLDHALLDYKNTSVELDWGKRSSICIGTARGLQFLHEEVIPHIVHRDIKASNILLDKDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTLKADVYSFGILILEIVSGRRSSTVFAGEIPMLLLERVWELYEGGKLLDIVDSRLGDYPQEEVLRYMKVALFCTQAAANRRPVMSQVVNMLTKKIKLNEKLLTAPGFYGGSSDNPASKKTSSTSTSNEVCSAVVSITQITPR 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 84662704 84669560 - Tan0009678.1 Tan05g3265 754573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3265 368 CDD STKc_IRAK 53 319 - -
Tan05g3265 368 Gene3D Transferase(Phosphotransferase) domain 1 123 329 - -
Tan05g3265 368 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 351 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Tan05g3265 368 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524(InterPro)
Tan05g3265 368 PIRSF TyrPK_CSF1-R 50 135 - -
Tan05g3265 368 PIRSF TyrPK_CSF1-R 123 365 - -
Tan05g3265 368 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Tan05g3265 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3265 368 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
Tan05g3265 368 SMART serkin_6 47 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3265 368 Pfam Protein tyrosine and serine/threonine kinase 49 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3265 368 FunFam cold-responsive protein kinase 1 18 122 - -
Tan05g3265 368 SUPERFAMILY Protein kinase-like (PK-like) 28 325 IPR011009 -
Tan05g3265 368 ProSiteProfiles Protein kinase domain profile. 47 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1052 Tan-Chr3:66800024 Tan05g3265 Tan-Chr5:84662704 6.40E-71 dispersed
Tan03g1053 Tan-Chr3:66800024 Tan05g3265 Tan-Chr5:84662704 6.80E-82 dispersed
Tan05g3265 Tan-Chr5:84662704 Tan08g2116 Tan-Chr8:73093997 1.20E-112 dispersed
Tan05g3265 Tan-Chr5:84662704 Tan05g2539 Tan-Chr5:76713709 1.00E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67716 PF07714 PK_Tyr_Ser-Thr 2.80E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3265 - - - 0.0