Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3301 ATGGCCGCTCTGAAACTCCCAATTCTTCTCCTTTTTTTCCCCCTTCTTTTCTTCTCCATATCCGCCCTTGATTTCCTCTTCAATGGCTTCAATTCCACCGACGTCTTGCTCTACGGCAACGCCACCATCGAATCCCCTATTCTCGCTCTCACCAACCAAACAAGTTTCTCAATCGGTCGCGCTTTGTACCCATCCAAAATCACCACTAAGGACTCCAATTCCTCCATGGTCTTTCCTTTTTCCACTTCTTTCATCTTCGCCATGGCCCCTTACAAGGACGTCCTCCCCGGCCATGGCTTGGTTTTCATCTTCGTTCCGTCCACCGGAATCAGCGGAACCGCCTCTGCTCAGAATTTGGGCTTTTTGAACTTCACGCTCAATGGGAATTCCGCTAATCATGTATTTGGAATCGAATTCGATGTGTTTGCCAATCAAGAATTCAACGACCCCAACGACAATCATGTCGGAATCAACTTCAATTCCTTGACCTCTAACTTCACCGGAGATGCTGGGTTTTGGTCCGACGGCGGCTCTTTCAGTAGGTTCAAGCTTAATAGCGGCGAAAACTACCAAGTCTGGGTTGACTATTCTGATTTTCAGATGAATGTTACGATGGCTCCGGCGGGGATGAAAAAGCCACGGCGGCCGTTGATTACTGCCTCCCTGAATCTCTCTGAAATTTTCCTCAACGAAATGTATGTGGGGTTCACGAGCTCCACGGGGCAGTTAGTTCAAGGCCACAACATTTTAGCTTGGAGTTTCAGCAACTCCAATTTTTCATTGAGCGAGAGTTTGATCACCACTGGATTGCCCTCCTTCGTCCTCCCAAAAGATCCATTTACCAAATCGAAATGGTTCATCGCCGCCGTGACGGTTGGAGCATTCCTCGTCGTTTGTTTCGTCGCTACGATTTTGGGGATTTTGATCGCCGACCATCGGAGGAGAGCGAGGGCGAGAGCGGAAATGGAAGATTGGGAATTGGAGTATTGGCCCCATCGAATCACATATCAAGAAATCGAATCGGCGACGAAGGGATTTGCAGAGGAAAATGTCATCGGAATCGGAGGGAACGGGAAAGTTCATAAAGGGGTTTTGGCCGGAGGAGGTTCAGAAGTTGCAGTGAAGCGAATTTCTCACGAAAACGACGGGATGCGAGAGTTCTTAGCTGAAATTTCGAGCATAGGGAGATTGAAGCACAGAAATGTCGTCAGTTTGAGAGGTTGGTGTAAGAAAGAGAAGGGAAATTTCTTACTGGTTTACGATTACATGGAAAATGGAAGTTTAGACAAATGGATATTCGATTGCGACGAGAGAATCATGCTGAGTTGCGACGATCGTATCAGAATATTAAAAAACGTAGCCTCAGGGGTTTTGTATTTACACGAAGGATGGGAATCAAAGGTCCTCCACAGGGATATAAAAGCCAGTAATGTGTTGCTAGACAAAGACATGAATGGAAGGCTAGGGGATTTCGGGTTGGCTCGAGTCCACGGCCATGGCCAAGTCGCTAGCACGACTAGAGTCGTTGGCACGATGGGCTACATCGCGCCTGAGTTGATCCGAACCGGACGAGCATCGTCTCAGTCGGATGTGTTTGGTTTTGGAGTCTTGGTTTTGGAAGTGATGTGTGGGAGGAGGCCAATAGAGGAAGGGAAGCCGCCATTGGTGGATTGGGTTCGGCGGTTGGTGGTCGAAGGGGAGCTGACCGCAGCACTCGATGAGAGGATGAGGAAGAAGGGCGGGTGGAGTGAGGAGGAAGTCGAGAGAGTGCTACATTTGGGGTTGTTGTGTGCGCATCCTGACCCGAACACTCGGCCGACGATGAGGCAAATTGTGAAAGTTTTAGAAGGGAAGATTGAGTTGGATGAGAATGAGAGTGAGAGCATGAATGCTTATTTGCTTCAAAGATTGAAGTCACAAGGAATGTGGTGTGATTCTAGTGTTGGTTTTGGTCATAAATTGCATCCAACTTTTGAGGATTTTCTTCAGTCTTCTTCATCTTCCATATCTTGGTCTACTTCCATTGTCACTGGCAGGTGA 2040 47.99 MAALKLPILLLFFPLLFFSISALDFLFNGFNSTDVLLYGNATIESPILALTNQTSFSIGRALYPSKITTKDSNSSMVFPFSTSFIFAMAPYKDVLPGHGLVFIFVPSTGISGTASAQNLGFLNFTLNGNSANHVFGIEFDVFANQEFNDPNDNHVGINFNSLTSNFTGDAGFWSDGGSFSRFKLNSGENYQVWVDYSDFQMNVTMAPAGMKKPRRPLITASLNLSEIFLNEMYVGFTSSTGQLVQGHNILAWSFSNSNFSLSESLITTGLPSFVLPKDPFTKSKWFIAAVTVGAFLVVCFVATILGILIADHRRRARARAEMEDWELEYWPHRITYQEIESATKGFAEENVIGIGGNGKVHKGVLAGGGSEVAVKRISHENDGMREFLAEISSIGRLKHRNVVSLRGWCKKEKGNFLLVYDYMENGSLDKWIFDCDERIMLSCDDRIRILKNVASGVLYLHEGWESKVLHRDIKASNVLLDKDMNGRLGDFGLARVHGHGQVASTTRVVGTMGYIAPELIRTGRASSQSDVFGFGVLVLEVMCGRRPIEEGKPPLVDWVRRLVVEGELTAALDERMRKKGGWSEEEVERVLHLGLLCAHPDPNTRPTMRQIVKVLEGKIELDENESESMNAYLLQRLKSQGMWCDSSVGFGHKLHPTFEDFLQSSSSSISWSTSIVTGR 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 84903016 84905373 + Tan0016767.1 Tan05g3301 754609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3301 679 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Tan05g3301 679 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524(InterPro)
Tan05g3301 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3301 679 Pfam Legume lectin domain 23 259 IPR001220 GO:0030246(InterPro)
Tan05g3301 679 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 308 422 - -
Tan05g3301 679 FunFam L-type lectin-domain containing receptor kinase S.4 21 262 - -
Tan05g3301 679 FunFam L-type lectin-domain containing receptor kinase S.4 423 628 - -
Tan05g3301 679 CDD lectin_legume_LecRK_Arcelin_ConA 23 252 IPR001220 GO:0030246(InterPro)
Tan05g3301 679 Gene3D - 21 264 - -
Tan05g3301 679 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Tan05g3301 679 Gene3D Transferase(Phosphotransferase) domain 1 423 638 - -
Tan05g3301 679 ProSiteProfiles Protein kinase domain profile. 346 633 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3301 679 CDD STKc_IRAK 352 617 - -
Tan05g3301 679 Pfam Protein kinase domain 347 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3301 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 262 IPR013320 -
Tan05g3301 679 PANTHER - 39 621 IPR050528 GO:0005886(PANTHER)
Tan05g3301 679 SMART serkin_6 346 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1384 Tan-Chr4:15315213 Tan05g3301 Tan-Chr5:84903016 2.50E-56 dispersed
Tan05g3301 Tan-Chr5:84903016 Tan09g2302 Tan-Chr9:72930759 2.40E-140 dispersed
Tan02g0214 Tan-Chr2:1862226 Tan05g3301 Tan-Chr5:84903016 1.30E-205 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67717 PF00069 Pkinase 5.30E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3301 - - - 0.0