Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3305 ATGGAGGAAGATGCTAATTCTTGGTTAAGAAGGACCAACTTTTCTCATACAATATGCTACCGTTTAGAGTCCTTACGATTGGCTTCCTTTCCTGTCACCACTCAGCCACCACTCAATTCAGTTGCGCAATCAAAAGCTGTCCCAGTTCCTTCTCATCATAGATCTACCCTTTGTTATAACCTACCCATTGAGAACAATCATGTTCCTAACAAGCAGAAGTTGTCTGTGTCTCTGCCTCCACAAACTACACTCTCGAGTGCATTTAAGGATGCACGTAAGGATCAGAAGCGATTTTCAACTCCACAACCTCGGAGGAGAGCAACCAAAAAAGAGAAGGGCAAAAGGGTATTCAGTAAAGAAGCTGAGGTGCACACTTCCCGAAAGGAAGAGAAGTTAAGAAGCCATCTGACGCATCTTGCCAAATTTAAAGGCAATGAGAAATCCAAGTTCAGGAAGGAGTCTTCTTGGACCAAGTTTTTCTATCACAGTGGAGGGAAGGTCACTGCCGTTGAAGCTGTAGATGAGTTGTCTGTTGACTTGTCCGAGTTGTATTTTGGGCCTAGATTTGCTCATGGAGCTCATAGTCGGCTTTACCATGGATTTTACTATGACAAAGTTGTTGCTGTTAAGATCATCAATCTACCGGAAGATGATGAAAATGGAGATCTTGCAGGTCGCTTAACCAAGCAGTTTGGTAGGGAAGTAACCCTTTTATCTCATCTTCACCATCCCAATGTTGTAAAGTTGGTAGCAGCTTGTAGAAAGCCACCTGCTTATTGGATCATCACTGAGTATCTATGTCAAGGTTCCTTAAGGGCATATCTACACAAACTTGAAAACAAATCTCTCCCACTGCAAAAACTGATTGCCATTGCCTTGGACATTGCTCGTGGGATGGAATACATTCACTCACAAGGCGTCATTCATCGGGATCTCAAACCTGAAAACGTTCTTATCGATCAAGACTTTTGTCTAAAGATTGCCGATTTCGGCATTGCTTGTGAGGAAGTACATTATGATACACTGGCCGACGACCCTGGAACATATCGTTGGATGGCCCCCGAGATGATCAAACGTAAACCTTATGGACGAAAGGTTGATCTCTACAGCTTCGGACTTATCCTGTGGGAATTGGTGGCTGGAAGAATCCCTTATGAGGATATGACTCCCATTCAAGCAGCTTATGCAGTTGTAAATAAGAATATTAGACCGGTCATCCCGAGCGAGTGTCCCTCGGTGATGCGGGCGTTGATCGAGAAATGTTGGTCGGTGCATCCGGAAAAGAGGCCGGAGTTTTGGCAGGTGGTGAAAGTACTAGAGCAACTTGAGAGTTCAGTTGGGGGAGATGGTACATTGATGAATGTAGAGCAGAAGCCAAGTTGGGAAGATCACAAGAAAGGTTTAAAGCGTTGGATACAAAAGCTTGGTCCTCATCATTCTCAGACTTACTCTAACTTCCACATCTAA 1467 44.1 MEEDANSWLRRTNFSHTICYRLESLRLASFPVTTQPPLNSVAQSKAVPVPSHHRSTLCYNLPIENNHVPNKQKLSVSLPPQTTLSSAFKDARKDQKRFSTPQPRRRATKKEKGKRVFSKEAEVHTSRKEEKLRSHLTHLAKFKGNEKSKFRKESSWTKFFYHSGGKVTAVEAVDELSVDLSELYFGPRFAHGAHSRLYHGFYYDKVVAVKIINLPEDDENGDLAGRLTKQFGREVTLLSHLHHPNVVKLVAACRKPPAYWIITEYLCQGSLRAYLHKLENKSLPLQKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQDFCLKIADFGIACEEVHYDTLADDPGTYRWMAPEMIKRKPYGRKVDLYSFGLILWELVAGRIPYEDMTPIQAAYAVVNKNIRPVIPSECPSVMRALIEKCWSVHPEKRPEFWQVVKVLEQLESSVGGDGTLMNVEQKPSWEDHKKGLKRWIQKLGPHHSQTYSNFHI 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 84958429 84960996 - Tan0008726.1 Tan05g3305 754613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3305 488 SUPERFAMILY Protein kinase-like (PK-like) 161 439 IPR011009 -
Tan05g3305 488 Gene3D Transferase(Phosphotransferase) domain 1 268 481 - -
Tan05g3305 488 ProSiteProfiles Protein kinase domain profile. 183 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 FunFam serine/threonine-protein kinase HT1 268 460 - -
Tan05g3305 488 Pfam Protein tyrosine and serine/threonine kinase 189 439 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 MobiDBLite consensus disorder prediction 85 132 - -
Tan05g3305 488 MobiDBLite consensus disorder prediction 113 132 - -
Tan05g3305 488 Gene3D Phosphorylase Kinase; domain 1 171 267 - -
Tan05g3305 488 SMART serkin_6 183 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 PANTHER SERINE-THREONINE PROTEIN KINASE 79 442 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan05g3305 488 CDD STKc_MAP3K-like 190 439 - -
Tan05g3305 488 PRINTS Tyrosine kinase catalytic domain signature 347 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 PRINTS Tyrosine kinase catalytic domain signature 410 432 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 PRINTS Tyrosine kinase catalytic domain signature 301 319 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 PRINTS Tyrosine kinase catalytic domain signature 366 388 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 PRINTS Tyrosine kinase catalytic domain signature 263 276 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3305 488 MobiDBLite consensus disorder prediction 89 106 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2484 Tan-Chr3:78269237 Tan05g3305 Tan-Chr5:84958429 6.00E-145 dispersed
Tan05g2017 Tan-Chr5:70162549 Tan05g3305 Tan-Chr5:84958429 1.00E-89 dispersed
Tan05g2018 Tan-Chr5:70162549 Tan05g3305 Tan-Chr5:84958429 7.50E-75 dispersed
Tan05g3305 Tan-Chr5:84958429 Tan08g0941 Tan-Chr8:13611319 4.00E-76 dispersed
Tan07g1571 Tan-Chr7:66882973 Tan05g3305 Tan-Chr5:84958429 6.20E-22 transposed
Tan03g2483 Tan-Chr3:78269237 Tan05g3305 Tan-Chr5:84958429 2.80E-178 wgd
Tan04g1048 Tan-Chr4:9327838 Tan05g3305 Tan-Chr5:84958429 4.10E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67718 PF07714 PK_Tyr_Ser-Thr 3.20E-61 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3305 - - - 0.0