Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g3369 | ATGGAAGACCAAGATAGACAGGATTTACGAAAAATTAGAAATTTTGAAATAAGATTAGATGCCAGAATAGCAAGTTTGGAAGAAAATCGGAAGAGATATACCAACGAGATTCTTGCACTGACGCAAATTTGCAATGAATTAGAGTTGACAATTCCTGATGAAGATCAAATTATGAGGAGGTTTGAACTCGGTGAAGAATTGGATCGAACACAAGCGACTTCTAGCACACCGACAAATAATGCGCTAAATAACGAGAAACAACAAAAATTGAAAGAGGAGTGTCGTAGACTAAAAGAAGAAACAGAGATGATAAAAGCTCAAACGGCTAGAACACGAGAAAAAATGGAGAAGATAGCCACTCGAATGAAAGAGCGTTCTAAGCAGATCGAAGTTTGTCTATCAGCGACTCCCCAAAAGATCTTTTATGATGATCCCCACGAAGGGGAAAACCAAGATAATTCGATGACACAATTGAATCAAGCTAATCTAAAGGCTCATAAAGGGCATTGGAAGAATATCATGGAGCATCACGATTTGATCCTTGACAACATCTCCATTGTGATTGGGAATGAGTTTAAAGGAAGGATAAGAGTATGTTGTCGAATCAGACCAGCAAACGAACAAGAACTTGGTCGAAACGATAGAGTGGTCCTCACAAGTCGAGACAACATCATAGTCGAGCATCCATTGAAAGATGGTCAATTGAAGATGTATTTATTTGATCGTGTATTTGATGGCAATGCATCTCAAGAAGATGTCTTTGTTGATACGCAGCATCTTGTTCAGTCTGTTGTTGATGGCTATAATGTTTGCATATTTGCATATGGACAAAATGGTTCTGGAAAGACGTACACAATTTATGGATCCAAGGACAACCCTGGATTGATACCTCGTGCGACCGAAGAGCTTTTTAAGATTTTGGAGGAGGAGAGTAACATCTTCTCATTCTCATTGAAGGCATACATGGTAGAACTCTATCAAGATACACTAATAGATATACTTCTACCACATAAGGTATCTCGATCAAAATTGAGAATAAGAAAGGATACACAGGGTGTAGTATCTTTAGACCAAGTGACATTGGTTGATTTTACTACCCGTGGAGAACTGAGCAACATTATCACGAGTGGCTTCAACTTACGACACATGTCGAAGACGTTGCTTAATGAACAAAGCTCAAGGTCGCATTTAGTTCTTTCCATCATCATCGAAACGACTAACAAGTTTACACAGTTGGTTACGAAAGGAAAGTTGACTTTTGTTGACTTAGCTGGCTCCGAGAGAGTCTATAAGTCAGGAGTTGTAGGCATGCGATTGAAGGAAGCTCAAAGTATTAATAAGTCATTGTTTGCCCTTGGAGATGTAATAAGGGCGTTGTCGAAAAGGGCTCCACATATCCCCTATAGAAACCACTCATTAACCATGTTATTGAGTGATTCCTTAGGTGGAAATGCCAAAACAATGATGTTTGTCAACGTTTCGCCTACAGATTCACATTTAAACGAAACATCGAATTCTTTAATATATGGCTCGAATGCTCGGTTCATAAAAAATCCCTTGAACGAGGTTAGCCAGACAGATAGATGA | 1587 | 38.94 | MEDQDRQDLRKIRNFEIRLDARIASLEENRKRYTNEILALTQICNELELTIPDEDQIMRRFELGEELDRTQATSSTPTNNALNNEKQQKLKEECRRLKEETEMIKAQTARTREKMEKIATRMKERSKQIEVCLSATPQKIFYDDPHEGENQDNSMTQLNQANLKAHKGHWKNIMEHHDLILDNISIVIGNEFKGRIRVCCRIRPANEQELGRNDRVVLTSRDNIIVEHPLKDGQLKMYLFDRVFDGNASQEDVFVDTQHLVQSVVDGYNVCIFAYGQNGSGKTYTIYGSKDNPGLIPRATEELFKILEEESNIFSFSLKAYMVELYQDTLIDILLPHKVSRSKLRIRKDTQGVVSLDQVTLVDFTTRGELSNIITSGFNLRHMSKTLLNEQSSRSHLVLSIIIETTNKFTQLVTKGKLTFVDLAGSERVYKSGVVGMRLKEAQSINKSLFALGDVIRALSKRAPHIPYRNHSLTMLLSDSLGGNAKTMMFVNVSPTDSHLNETSNSLIYGSNARFIKNPLNEVSQTDR | 528 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 85424016 | 85443744 | + | Tan0006463.1 | Tan05g3369 | 754677 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g3369 | 528 | MobiDBLite | consensus disorder prediction | 68 | 85 | - | - | |
| Tan05g3369 | 528 | Pfam | Kinesin motor domain | 201 | 514 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Tan05g3369 | 528 | ProSiteProfiles | Kinesin motor domain profile. | 195 | 516 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Tan05g3369 | 528 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 195 | 519 | IPR027417 | - | |
| Tan05g3369 | 528 | Coils | Coil | 16 | 43 | - | - | |
| Tan05g3369 | 528 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 25 | 514 | IPR027640 | GO:0003777(InterPro)|GO:0007018(InterPro) | |
| Tan05g3369 | 528 | MobiDBLite | consensus disorder prediction | 68 | 89 | - | - | |
| Tan05g3369 | 528 | Gene3D | Kinesin motor domain | 190 | 528 | IPR036961 | - | |
| Tan05g3369 | 528 | PRINTS | Kinesin heavy chain signature | 466 | 487 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Tan05g3369 | 528 | PRINTS | Kinesin heavy chain signature | 417 | 435 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Tan05g3369 | 528 | PRINTS | Kinesin heavy chain signature | 267 | 288 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Tan05g3369 | 528 | PRINTS | Kinesin heavy chain signature | 386 | 403 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Tan05g3369 | 528 | Coils | Coil | 80 | 107 | - | - | |
| Tan05g3369 | 528 | ProSitePatterns | Kinesin motor domain signature. | 416 | 427 | IPR019821 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro) | |
| Tan05g3369 | 528 | SMART | kinesin_4 | 193 | 524 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g3369 | Tan-Chr5:85424016 | Tan11g1964 | Tan-Chr11:33317844 | 1.80E-122 | dispersed | |
| Tan05g3369 | Tan-Chr5:85424016 | Tan01g2499 | Tan-Chr1:33586196 | 1.80E-50 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g3369 | K27887 | - | csv:101206704 | 432.565 |