Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3372 ATGGCTGCTTTTGAAAAAGACGATGTACCAATGCTATCAAACACTGATCCACCATTGTTAGATGAACAAGTGGATTCTTATTTTCCTTCATATGCATCATTGGCCCGGAGTTCATCACTATCAATTCCAACAACTTCTTCTGGGATGTATGGTAGTGAAGCAAATCTTGTTGGTCATACTGGTCCCCTACGAATTGAAAGAAAAAGTTCTTTCATAGTGAGTGGTTCAAGATATACTGGCCATAAACCTGAAAAATTTTCAGAATCAAATCCTGGTGTGACTGAAAGCAAAACTGCAGAGCCATTGGCAGACAAATTTCCTTCTTTCAAGACGAAGGATGAGTTTGATTGGTCCATTCATAACTCTGCTGGCAGAAACGAACACTTAATAAGGTCAGGCCAGCTGGGAGTGTGCAATGATCCTTTCTGTATAACTTGCCCAACATATAATTTCAAAGCATCGCAACAGAAAATCTCAAGAACGGCAGGCATATTTGACCCTGAGTTTCATAACGATCTCTATGGAGAAGGGAAAGGTTGGGCGGGGAAGCTTGGGTCCTTCTGGTGCTTCTTGCTTCCATATATTCCTGGAGTTATGAATCCTCATGCAAAAGTTGTTCAGCAATGGAATAAGTTTTTTGTCATTTCTTGCTTGGTGGCGATCTTCTTGGATCCATTATTTTTCTTCTTGCTTGCTGTCCAAGAGAATAACAAGTGCATAGTTATTAATTGGCCAATGACCACAACATTGGTGGTTTTCCGAAGCATGACTGATTTTATCTATTTCCTACACATGCTTCTCCAGTTTAGGTTGGCTTACGTGGCACCAGAATCCAGAGTTGTTGGTGCAGGCGAATTAGTCGACCATCCGAAGAAAATTGCTGTGAATTACCTTAAAGGAAATTTTTTTATAGATTTGCTTGTTGTTTTGCCGCTGCCTCAGATAATAGTTTTTCTAGTGCTGCCGAAGTCTTTGGGGTCATCTGGAGCAAATTATGCAAAAAATCTACTACGCACTGCAGTTATTGTTCAATATATTCCCAGGCTGTATAGGTTTCTACCTCTTCTTGCTGGCCAGTCTCCAAGTGGCTTTGTATTTGAGACAGCATGGGCAAATTTTGTCATCAATCTTCTCACCTTTATGTTGGTTGGTCATATTGTTGGGTCTTTCTGGTATCTATTTGGGCTTCAGGGGGTGAATCGATGTTTTCGAGATGCCTGCAATAAAACTGGAACTCCAAGCTGCTTAGAATATATAGATTGTGGCCATGGGGATGAAGCTGGGAGTCATAGTCAGGATCCACTGCGGGTAAAATGGAGAGATAATGAGAATGCTTCGGCATGTTTTGCTAAAGAAGGTTTTGATTATGGAATCTACCTTCAGGCTGTAAATCTTACTACAGAAAATAGTATAATCACCAGATATACTTACTCATTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGGAACCAAGTTCCAAGCTATTACGTCTATGAAGTCCTTTTCACTATGGGTATTATTGGGCTTGGTCTATTGCTGTTTGCTCTTCTCATTGGGAATATGCAGAACTTTCTCCAGGCTCTTGGAAGAAGGAGGTTAGAAATGTCACTAAGACGTCGTGATGTTGAGCAGTGGATGGAGCATCGTCGATTGCCAGAGAATTTAAGAAGGCAAGTACGACAGGCTGAAAGGTACAATTGGGCTTCTACAAGAGGAGTAAATGAAGAAAGGATTTTCGAAAATTTGCCTGAGGACCTACAAAGAAACATAAGACGACATCTCTTTAGATTTGTCAACAAGGTTCGAATTTTTGCACTGATGGACTATGAGCCTATTTTAGATGCAATACGTGAGAGACTGCGACAAAAGACATACATAGAAGGAAGTGAAGTTTTTTCTGCTGGAGATATCATTGAGAAGATGGTTTTCATTGTACGGGGGAAAATGGAGAGCCGTGTAGATGGGACTGGGATTGTGGTTCCCTTATCTGAAGGAGATGTCTGCGGTGAGGAACTTCTAACATGGTGTCTTGAGCATTCCTCCATAAACAGAGATATGAGGCGACATCAAGTTCCAACACAAAGATTGGTTAGCAACCGGACAGTGAAGTGCTTATCAAATGTTGAAGCATTTTCTCTCCGGGTTGCAGACCTTGAAGAAGTGACCAGTATATTTTCTAGATTCTTGCGAAATCCACGTGTTCAAGGAGCCATAAGGTACGAATCACCCTACTGGAGATACCTAGCGGCAACACGTATTCAAGTAGCTTGGAGATACAGGAAAAGGCGTCTTTCTCGAGCTCAATCCTCTCAATCTAACAACTAA 2331 41.4 MAAFEKDDVPMLSNTDPPLLDEQVDSYFPSYASLARSSSLSIPTTSSGMYGSEANLVGHTGPLRIERKSSFIVSGSRYTGHKPEKFSESNPGVTESKTAEPLADKFPSFKTKDEFDWSIHNSAGRNEHLIRSGQLGVCNDPFCITCPTYNFKASQQKISRTAGIFDPEFHNDLYGEGKGWAGKLGSFWCFLLPYIPGVMNPHAKVVQQWNKFFVISCLVAIFLDPLFFFLLAVQENNKCIVINWPMTTTLVVFRSMTDFIYFLHMLLQFRLAYVAPESRVVGAGELVDHPKKIAVNYLKGNFFIDLLVVLPLPQIIVFLVLPKSLGSSGANYAKNLLRTAVIVQYIPRLYRFLPLLAGQSPSGFVFETAWANFVINLLTFMLVGHIVGSFWYLFGLQGVNRCFRDACNKTGTPSCLEYIDCGHGDEAGSHSQDPLRVKWRDNENASACFAKEGFDYGIYLQAVNLTTENSIITRYTYSLFWGFQQISTLAGNQVPSYYVYEVLFTMGIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQWMEHRRLPENLRRQVRQAERYNWASTRGVNEERIFENLPEDLQRNIRRHLFRFVNKVRIFALMDYEPILDAIRERLRQKTYIEGSEVFSAGDIIEKMVFIVRGKMESRVDGTGIVVPLSEGDVCGEELLTWCLEHSSINRDMRRHQVPTQRLVSNRTVKCLSNVEAFSLRVADLEEVTSIFSRFLRNPRVQGAIRYESPYWRYLAATRIQVAWRYRKRRLSRAQSSQSNN 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 85471202 85511052 + Tan0008678.1 Tan05g3372 754680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3372 776 CDD CAP_ED 605 723 IPR000595 -
Tan05g3372 776 Gene3D Jelly Rolls 603 729 IPR014710 -
Tan05g3372 776 Pfam Ion transport protein 211 531 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan05g3372 776 SUPERFAMILY cAMP-binding domain-like 533 731 IPR018490 -
Tan05g3372 776 Gene3D - 201 527 - -
Tan05g3372 776 Gene3D Helix hairpin bin 528 597 - -
Tan05g3372 776 SUPERFAMILY Voltage-gated potassium channels 204 528 - -
Tan05g3372 776 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 195 770 - -
Tan05g3372 776 ProSiteProfiles cAMP/cGMP binding motif profile. 618 675 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3372 Tan-Chr5:85471202 Tan08g0725 Tan-Chr8:7495317 4.60E-111 dispersed
Tan05g3372 Tan-Chr5:85471202 Tan05g0241 Tan-Chr5:1824058 8.70E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3372 K05391 - csv:101215903 1369.37