Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g3392 ATGGATGGGGATGACTGCTATTTGGAAGGTAGTGATGAGGGGAACAACCTGATTCTGTTTCAGTCTCAAGTGAAGTGGTTTGAGGAAGGATTTAGGGCACTGAGGCTGGGGAATTCGTGGGCGGCAGACTGTGTGTTTTGGCCTCCTACTGGTGGAAGGAAAAGGCTTCTAGTGGAGTTAGGTAACTTCAACAATGGATGGCTGGTGTTTGGCAATTTATTAACTGATGCCTTGCAAAATGTTGACGCTAGGCCTGTGACTCCTATCCCAGTTGTGCCCTCGGCCCTAGATGTGGCTCTCCAGGGTGAAGTAGCAGTACCTAGGTCAAATGAGGTGTTAATTGAGTCTGGGACCAGATCAAGGAGAAAGAAATTCCAATGGTTGAGAAAGGAGCAAGACATCTTAAGTCTCGATTTTGACCAACTTTGGGTTATCACACGCTTGTTCGAGCACATTTCTTGGATTCAAATCAGTGTTGCTTTCGAAAGTGTCTTTGGTTATAAAGTTGTTATTAATCCATTTTCAGCTGACAAAGCTCTGTTGTTATTAAAAGTTGCAGAGGAAAGATCGTGGGCTGACCGACTCAACTGTCGGCGTCTGGGGGATTCCTTTGTCAGAATTGAAAAGTGGTCGAGAGTGGAGCATGGTATTTCTAATGTTATTAGCTGTTACGGTGGATGGGTATCCATTTTAAACTTACCGTTTGTAATGTGGAGACAGGAAGTTTTCTCGGCCATTGGTTTGCATTTGGGAAGGTTATTGGAAGTAGCGTCAAGCACTCTCTATATAACGAATCTTGCTGCCGCAGTTACAAGACATTCAATTGACATTGTACGAATTGAGCCGGTTCTTAAAGATGCGTTAGGAGATGAGGTTGCTCTATCAAGGGAGGACGATCACTCAGTTCAGGTCCCATATCTTATGGCAAATGTGTTGGGTTCGTCAGCAACAGTGACGAAAGTAGGGGATCTGCGTGTGGTCGATGATACTCAGGTCAGCTCCATGGCCTATCCTCTGGTTGAGGGCTTGGGGGATGAGGAAGAGTCTTTGGAAGGAGTTAGAAGGAATGACTCTTCGGTTCCCTCGAGGGGGATTCTGGAAGCTTCTGACGATTGCTCAGTGCCAAGCAATCATAATTTTACCGTATCAAGCTTGGAAGACATTTCTGGTCAGTTAGTTAAGGGAAAAAAGAAATTTAGGCCTCTGTCTCTCGAAAATTTTAAGGAGCCGCTACGGCAAGGCAAGGAGGCAGGTGGCACTCCTTCAGGTGGTTTCTCGGAGTATCCTTTCTCTTCCTCTGTGCCGGATACAGTGGTATTGACTCTAAAGCCTTTGCCACTCTCTTCTAATTCAACATCCAAGCCAGTAAGCTCTCTCCCTCATATAGCAGTACAATTGGAAATTTTTAAGGAACTTCCGGACGGTGCCTCTTTGTTCAGAGCTTCTCTTCGGCCAGGGATTTCGAGGGCTAGGGCTGCGAGTCCCGTTTCATTTCTGAAGGAGGGGGAGTCGGTAGTAGATTCGGTAGTTAGTCTAAGTTCTCCAGAGGCTAGCATCATAAAAACAACTGTGCCCGGTAATTTAGTGGCTGGTTCTCCAGGACGCTATGAATCATCATGGTCATGTTCGGAAGGATTGAGAAATTTAGATTTCTGTACACCAGAGTCTTCTTATGACTGCGAAAACCCAAAGGAGTCAGAATCTCCACGCTTTCAAGCTATACTCCGAGTTACAAGTGCTCCTCGAAGGAAATATCCTGCCGATATCAAAAGTTTTTCCCATGAACTAAATTCAAAAGGCGTACGACCTTTCCCACTTTGGAAGTCACGTCGTTTAAATAATTTGGAGGAGATCTTAGTTATGATACGAGCAAAATTTGACAAGGCAAAGGAAGAAGTAAATTCTGATTTGGCTATTTTTGCTGCTGATCTGGTTGGAATTCTTGAAAAAAATGTTGATACTCATCCAGAGTTCCAAGAGACAATTGAAGACTTGTTGGTGTTAGCTCGAAGTTGTGCCATGTCATCTCCTGGTGAATTTTGGCTTCAGTGTGAAAGCATTGTTCAGGAATTGGATGATAGACGCCAGGAACTTCCTTCAGGCATGCTGAAACAACTTCATACTCGAATACTGTTCATTCTCACTAGATGTACCAGGTTACTGCAGTTCCATAAAGAAAGTGGGTTAGCTGAAGATGAAAATGTTTTTCAGCTTCGTCAGTCTCGAAATCTGCATTCTGCTGATAAACGCATTCCTCCAGTTATGGGAAGGGAAATGAAAAGTTCTAATGCAGCGAAGCCTTCTAAGACAGCTTCATCCAGGAAGTCTTACAGCCAGGAGCAGCGTGGCTTGGATTGGAGCAGAGAACACAATATACTGCCTGGGAATAACGTCTCTACATCTTCCGCTGATACTTCAAAGAACTTGGTATCTCCTACTGGCAGAGACCGGATGGCTTCTTGGAAAAGATTGCCTTCTCCGGCAGCAAAAAGTGTGAAAGAACCTACTTTGAAGGATCAGGGTGACAATAAGAAGTTTAAATCTTTGAACATGCCAAAAATCAGGACTGGTGTTTCTGAAACTGATTTGGCTGCTGCTAAGGTTTCTGAGCTTCCTCTGCTCAGAGATTCTCATGACCAGCCAACCAAGCACCAACACAAACCTTCTTGGGGTTGGGGTGATCAACCGACTGTATCTGATGAGAGTTCAATAATTTGTCGCATTTGTGAAGAAGAGATTCCTACTGCAAATGTGGAAGACCATTCAAGAATCTGTGCAGTTGCTGATCGATGTGATCAAAAGGGTATAAGTGTTAATGAACGCCTACTCAGAATTGCTGAAACTCTAGAGAAGATGATCGAGTCCTTTACGCAAAAGGATTCTCAACATGTAGGAAGTCCAGATGTTGCGAAAGTGTCAAATTCTAGCATGACTGAAGAGTCTGATATCTCCCCAAAACATAGTGATTGGTCCCGAAGGGGCTCAGAAGACATGCTTGATTGCTTCCATGAAACTGAAAATTCTGTTTTTATGGATGACATAAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCGGCTGGTAGCATGACTCCTAGATCTCCTTTATTAACACCAAGAACCAGTCAGTTTGACTTGTTTTTGGCAGGGAAAGGTGCTTACTACGAACACGATGATCTTACACAGATCAGTGATCTTGCAGATATTGCACGCTGTTCAGCAAATACACCTCTGGGTGATGATTGCTCGATGCAATATCTGTTAACATGCCTTGAAGACTTGAGAGTTGTCATTAACCGCAGGAAGTTTAATGCACTGACAGTTGATACTTTTGGCACTCGCATTGAAAAGTTAATCCGGGAGAAGTATTTGCAGCTTTGTGAGCTGGTGGATGATGAAAAGATTGACATAACAAGCACTGTTATTGATGAAGATACTCCTCTTGAAGATGATATTGTCCGTAGCTTAAGAACAAGTCCCATCCATTCTTCAAAGGACCGTACAACAATTGATGACTTTGAGATTATAAAACCAATTAGCCGTGGGGCATTTGGTCGGGTCTTCCTGGCTAAAAAGAGGACAACGGGAGACCTTTTTGCAATAAAGGTTTTGAAGAAAGCTGATATGATTCGGAAGAATGCTGTTGAAAGTATTCTGGCAGAACGTGATATTTTAATTTCTGTGCGCAACCCTTTTGTGGTTCGCTTCTTCTACTCTTTTACTTGTCGTGAAAATTTGTATCTCGTGATGGAGTATTTGAACGGAGGAGATCTGTACTCCTTGTTGAGAAATTTAGGTTGCTTGGATGAGGAGGTTGCTCGTGTATATATTGCAGAAGTTGTTCTTGCTTTGGAGTATTTGCATTCACTTGGGGTAGTTCATCGGGACTTGAAGCCTGATAATTTATTAATAGCACATGATGGTCATATTAAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTTATCAACAGTACTGATGATTTGTCTGGACCAGCTGTTAGCGGTACAACTCTTCTTGGGTATGACGAGCCTACAATGTCTGCTTCTGAGCATCAACAAGAAAGAAGGAAGAAGCGTTCTGCTGTTGGCACACCTGACTATTTGGCACCAGAGATACTATTGGGAACTGGACATGGTGCCACAGCTGACTGGTGGTCTGTCGGGATTATTTTATTTGAACTAATTGTTGGAATTCCACCCTTCAATGCAGAGCATCCCCAGACTATATTTGATAACATTCTCAATCGTAAGATCCCTTGGCCTCAAATACCTGAAGAGATGAGCCATGATACTCAAGATTTAATTGATCGCCAATTTATTACTCAGGTGAAGCAGCATATGTTCTTTAAAGATATCAACTGGGACACACTTGCCCGACAAAAGGCTGCATTTGTTCCAACATCTGAAAGTGCTCTTGATACTAGTTATTTTACAAGTCGCTACTCATGGAATCATTCAGATGATCATGGCTATCCACCCAGTGAACTTGAGGATTCGAGTGATGCTGACAGCTTAAGTGGTAACAGTAGTTTGAGCAATCGTCAAGATGAAGTGGGAGATGAATGTGGGGGCCTTACAGATTTTGAGCCTGGCTCTTCTGTCAATTACTCGTTCAGTAATTTCTCTTTCAAGAATCTCTCCCAGCTTGCATCCATCAACTATGACCTGCTTTCTAAAGGTTTGAAGGATGATCCTCCCAATCACGATCCATAA 4752 43.18 MDGDDCYLEGSDEGNNLILFQSQVKWFEEGFRALRLGNSWAADCVFWPPTGGRKRLLVELGNFNNGWLVFGNLLTDALQNVDARPVTPIPVVPSALDVALQGEVAVPRSNEVLIESGTRSRRKKFQWLRKEQDILSLDFDQLWVITRLFEHISWIQISVAFESVFGYKVVINPFSADKALLLLKVAEERSWADRLNCRRLGDSFVRIEKWSRVEHGISNVISCYGGWVSILNLPFVMWRQEVFSAIGLHLGRLLEVASSTLYITNLAAAVTRHSIDIVRIEPVLKDALGDEVALSREDDHSVQVPYLMANVLGSSATVTKVGDLRVVDDTQVSSMAYPLVEGLGDEEESLEGVRRNDSSVPSRGILEASDDCSVPSNHNFTVSSLEDISGQLVKGKKKFRPLSLENFKEPLRQGKEAGGTPSGGFSEYPFSSSVPDTVVLTLKPLPLSSNSTSKPVSSLPHIAVQLEIFKELPDGASLFRASLRPGISRARAASPVSFLKEGESVVDSVVSLSSPEASIIKTTVPGNLVAGSPGRYESSWSCSEGLRNLDFCTPESSYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRAKFDKAKEEVNSDLAIFAADLVGILEKNVDTHPEFQETIEDLLVLARSCAMSSPGEFWLQCESIVQELDDRRQELPSGMLKQLHTRILFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKRIPPVMGREMKSSNAAKPSKTASSRKSYSQEQRGLDWSREHNILPGNNVSTSSADTSKNLVSPTGRDRMASWKRLPSPAAKSVKEPTLKDQGDNKKFKSLNMPKIRTGVSETDLAAAKVSELPLLRDSHDQPTKHQHKPSWGWGDQPTVSDESSIICRICEEEIPTANVEDHSRICAVADRCDQKGISVNERLLRIAETLEKMIESFTQKDSQHVGSPDVAKVSNSSMTEESDISPKHSDWSRRGSEDMLDCFHETENSVFMDDIKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQFDLFLAGKGAYYEHDDLTQISDLADIARCSANTPLGDDCSMQYLLTCLEDLRVVINRRKFNALTVDTFGTRIEKLIREKYLQLCELVDDEKIDITSTVIDEDTPLEDDIVRSLRTSPIHSSKDRTTIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGIILFELIVGIPPFNAEHPQTIFDNILNRKIPWPQIPEEMSHDTQDLIDRQFITQVKQHMFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNHSDDHGYPPSELEDSSDADSLSGNSSLSNRQDEVGDECGGLTDFEPGSSVNYSFSNFSFKNLSQLASINYDLLSKGLKDDPPNHDP 1583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 85982695 86045624 + Tan0001705.1 Tan05g3392 754700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g3392 1583 ProSiteProfiles Protein kinase domain profile. 1185 1478 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3392 1583 MobiDBLite consensus disorder prediction 873 896 - -
Tan05g3392 1583 FunFam Probable serine/threonine-protein kinase cot-1 1268 1483 - -
Tan05g3392 1583 ProSiteProfiles AGC-kinase C-terminal domain profile. 1463 1566 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3392 1583 MobiDBLite consensus disorder prediction 957 991 - -
Tan05g3392 1583 SMART serkin_6 1185 1462 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3392 1583 MobiDBLite consensus disorder prediction 792 813 - -
Tan05g3392 1583 Coils Coil 939 959 - -
Tan05g3392 1583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1304 1316 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g3392 1583 FunFam probable serine/threonine protein kinase IREH1 1183 1272 - -
Tan05g3392 1583 Coils Coil 612 632 - -
Tan05g3392 1583 MobiDBLite consensus disorder prediction 763 780 - -
Tan05g3392 1583 Pfam Protein kinase domain 1186 1453 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g3392 1583 Gene3D Phosphorylase Kinase; domain 1 1183 1491 - -
Tan05g3392 1583 MobiDBLite consensus disorder prediction 958 981 - -
Tan05g3392 1583 SUPERFAMILY Protein kinase-like (PK-like) 1182 1502 IPR011009 -
Tan05g3392 1583 CDD STKc_MAST_like 1191 1467 - -
Tan05g3392 1583 PANTHER SERINE/THREONINE-PROTEIN KINASE 888 1558 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Tan05g3392 1583 MobiDBLite consensus disorder prediction 746 850 - -
Tan05g3392 1583 MobiDBLite consensus disorder prediction 835 849 - -
Tan05g3392 1583 MobiDBLite consensus disorder prediction 1512 1529 - -
Tan05g3392 1583 MobiDBLite consensus disorder prediction 1025 1047 - -
Tan05g3392 1583 MobiDBLite consensus disorder prediction 1501 1539 - -
Tan05g3392 1583 Gene3D Transferase(Phosphotransferase) domain 1 1269 1480 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2922 Tan-Chr1:65393440 Tan05g3392 Tan-Chr5:85982695 2.60E-17 dispersed
Tan01g3399 Tan-Chr1:96673642 Tan05g3392 Tan-Chr5:85982695 3.20E-305 dispersed
Tan05g3370 Tan-Chr5:85445624 Tan05g3392 Tan-Chr5:85982695 3.50E-56 dispersed
Tan05g3392 Tan-Chr5:85982695 Tan06g2405 Tan-Chr6:76338891 2.70E-65 dispersed
Tan07g1133 Tan-Chr7:38757716 Tan05g3392 Tan-Chr5:85982695 2.40E-10 dispersed
Tan05g3392 Tan-Chr5:85982695 Tan01g4598 Tan-Chr1:112003969 1.70E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67720 PF00069 Pkinase 1.30E-58 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g3392 K08789 - csv:101214945 1961.42