Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g0034 | ATGACGTCTCGTGGTTCATCCGCTTCGGCCAATGGCCTATTGCCGCTCGGCCGGCAACATGATATTGAGTCTGGCCACTCCTCCGGCAAAAGCATTAACGAGGAGGAAGAAGAGGCTGAATCCGATCCTTTTGATATCGACAATACCAAAAATGTCCCTCTCGAGATACTCAAGCGATGGAGGCAAGCTGCATTGGTGCTTAATGCATCTCGGAGATTTCGATATACTTTGGACTTAAAAAAGGAGGAAGAGAAAGAACAAAGAAGAAGGATGATTAGAGCCCATGCACAAGTCATAAGGGCAGCACTGCTTTTCAAATTGGCAGGGGAACAACAAACTGGTTTCTCAGTATCACCTCCAGCGTCAACTGGTGACTATGCCATTAGTTTAGAACAGCTTGCCTCATTGACCCGTGATCAAAACTTTTCTTCTCTACAACAATATGGAGGAGTTAAAGGCTTATCGAATTTATTGAAAACAAATACTGAGAAAGGAATATCGGGAGATGAAACTGATCTACTGAAAAGAAGAAATTCATTTGGATCAAATACATATCCACGTAAAAAAGGACGGAGTTTCTTGAGATTTCTTTGGGAAGCCTGGCAGGATTTAACCCTAATCATCTTGATTATAGCTGCAGTGGCATCATTAGCTTTGGGGATTAAAACAGAGGGTGTAAAGGAAGGATGGTATGATGGAGGAAGTATTGCCTTTGCTGTGATTCTTGTCATAGTGGTCACAGCGGTTAGTGATTATCGACAGTCTCTTCAATTTCAAAACTTAAATGAGGAAAAACAGAACATACAAGTAGAGATCTTGAGGGATGGTAGAACTTTAAAGGTCTCAATATTTGACCTTGTTGTTGGGGATGTTGTACCTCTTAAAATTGGAGATCAGATCCCTGCCGATGGAATATTGATCACTGGTCATTCACTTGCCATAGATGAATCTAGCATGACAGGCGAAAGCAAGATTGTTCGCAAGGATCAGAAGGCACCCTTTATGATGTCTGGTTGTAAGGTTGCAGATGGAGTTGGTACCATGATGGTAACTGCTGTTGGAATCAATACTGAATGGGGATTGTTGATGGCAAGCATCTCAGAGGATACTGGGGAAGAAACTCCCTTGCAGGTTCGGTTGAACGGAGTTGCAACCTTCATAGGCATAGTTGGGCTTGCGGTTGCAGTTTCTGTGCTAGCTGTTCTTTTGGGCAGATACTTCACGGGAAATACACATGATGCAAATGGAAACATTGAATTTCAGCGCGGGCTTACGAGTCTAGGTGATGCTGTAGATGGAGTTATTAAAATCGTTACTGTTGCTGTTACTATTGTGGTTGTTGCAGTACCTGAAGGACTTCCTTTGGCTGTCACCCTAACATTAGCATACTCCATGAGGAAAATGATGGCTGATAAAGCATTGGTTCGTAGACTGTCTGCTTGTGAAACTATGGGTTCTGCAACAACAATTTGCAGTGATAAGACTGGAACGTTGACTTTAAATCAGATGACTGTGGTGGAGGCATGTGTTGGCAAGAAGATGATTAGTCCCCCAGATGATCCACTGCAGTTTCACACATTGGTACTCAATCTGTTATATGAGGGCATTGCTCAGAACAGCACGGGCAATGTTTTTGTGCCTAAGGACGGGAGAAGTATAGAGGTCACTGGATCTCCTACAGAAAAGGCTATTTTATCTTGGGCTGTCAAGCTGGGAATGAAGTTCAATGTCGTCAAATCAGAGTCCAAAGTTCTCCATGTTGTCCCTTTCAATTCAGAAAAGAAGCGAGGTGGTGTTGCAATAAAACGGGCCGACTCAGAAGTTTACATACATTGGAAAGGAGCGGCAGAGATGGTCTTATCTTCTTGTACAAAGTATCTGGACATGAATGGTGAAGTGCACTCAATGGAAAACAATGAGGATTATTTTAAGGTAGCTATTAACGACATGGCTGCAAAAAGTTTGCGTTGTGTTGCGATTGCATATAGATCATATGAACTTGAGAATGTTCCAGTAGATGAACAGCGTTTGGATCAATGGGATTTGTCTGCTGATGACCTTATTCTGCTTGCAATTGTTGGTATAAAGGATCCTTGTCGCGATGGTGTTAAAGAGGCTGTGAAAGTGTGCACGGATGCAGGTGTCAAGGTGCGCATGGTCACGGGAGACAATATACAGACTGCAAAAGCTATAGCAATAGAGTGTGGAATACTGAACGCAACAGAAGATGCTTCTGAGCCTACAGTTATTGAAGGAAAAGCATTCCGTGTATTGTCTGAGATGGAAAGAGAAATAGTTGCCCCTAAAATAACGGTGATGGGGAGGTCTTCGCCCAATGACAAGCTCTTGCTTGTTCAAGCATTAAGAAAGGGAGGAGACGTTGTTGCTGTAACGGGAGATGGGACTAATGATGCCCCTGCACTCCATGAGGCAGATATCGGTCTTTCTATGGGCATTCAAGGCACTGAAGTTGCTAAAGAAAGTTCTGATATTGTTATCCTGGATGATAACTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGGCGTTCTGTGTATGCAAACATTCAAAAGTTCATCCAGTTTCAGCTCACTGTAAATGTTGCTGCTCTTGTGATTAATGTTGTTGCAGCTGTGTCTTCTGGTGAAGTTCCTTTAAATACTGTGCAGCTTCTCTGGGTTAACCTGATCATGGACACACTTGGTGCTCTAGCATTAGCTACTGAACCACCAACAGACCACCTGATGCATCGGTCACCTGTTGGGCGAAGGGAACCCCTTATAACTAATATCATGTGGAGGAATTTGATTGTACAGGCTTTGTATCAAGTTGCTGTACTTCTTCTTCTCAACTTCTATGCCACTGATATTCTTCAATTGAATAGTGATACCAAGGAACACGCCTTTAATGTGAAGAATACAGTGATTTTCAATGCATTTGTCCTCTGCCAAATATTCAATGAATTTAATGCTCGAAAACCAGATGAAATAAACGTGTTCAGTGGAGTGACGAAAAATTACCTCTTTATGGGAATAGTTGGAACCACATTCGTGCTTCAGATTATCATCGTCGAATTTCTTGGAAAATTTACTTCCACAGTAAAACTTGATGGGAAGCAATGGCTTGTCTGCTTTGCTATCGGCCTTGTCAGCTGGCCGCTGGCGGTTGTTGGCAAACTGATTCCTGTTCCGGAGACCCCATTGGCTAAATACTTCACAAAGCCAGTTCAACGATGCAGAAGGTCACGTGGTGCTTAA | 3255 | 42.92 | MTSRGSSASANGLLPLGRQHDIESGHSSGKSINEEEEEAESDPFDIDNTKNVPLEILKRWRQAALVLNASRRFRYTLDLKKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQQTGFSVSPPASTGDYAISLEQLASLTRDQNFSSLQQYGGVKGLSNLLKTNTEKGISGDETDLLKRRNSFGSNTYPRKKGRSFLRFLWEAWQDLTLIILIIAAVASLALGIKTEGVKEGWYDGGSIAFAVILVIVVTAVSDYRQSLQFQNLNEEKQNIQVEILRDGRTLKVSIFDLVVGDVVPLKIGDQIPADGILITGHSLAIDESSMTGESKIVRKDQKAPFMMSGCKVADGVGTMMVTAVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLAVAVSVLAVLLGRYFTGNTHDANGNIEFQRGLTSLGDAVDGVIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEACVGKKMISPPDDPLQFHTLVLNLLYEGIAQNSTGNVFVPKDGRSIEVTGSPTEKAILSWAVKLGMKFNVVKSESKVLHVVPFNSEKKRGGVAIKRADSEVYIHWKGAAEMVLSSCTKYLDMNGEVHSMENNEDYFKVAINDMAAKSLRCVAIAYRSYELENVPVDEQRLDQWDLSADDLILLAIVGIKDPCRDGVKEAVKVCTDAGVKVRMVTGDNIQTAKAIAIECGILNATEDASEPTVIEGKAFRVLSEMEREIVAPKITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGEVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQALYQVAVLLLLNFYATDILQLNSDTKEHAFNVKNTVIFNAFVLCQIFNEFNARKPDEINVFSGVTKNYLFMGIVGTTFVLQIIIVEFLGKFTSTVKLDGKQWLVCFAIGLVSWPLAVVGKLIPVPETPLAKYFTKPVQRCRRSRGA | 1084 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 593835 | 615188 | + | Tan0012584.1 | Tan06g0034 | 754738 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g0034 | 1084 | PRINTS | Sodium/potassium-transporting ATPase signature | 870 | 891 | - | - | |
| Tan06g0034 | 1084 | PRINTS | Sodium/potassium-transporting ATPase signature | 484 | 505 | - | - | |
| Tan06g0034 | 1084 | PRINTS | Sodium/potassium-transporting ATPase signature | 610 | 628 | - | - | |
| Tan06g0034 | 1084 | PRINTS | Sodium/potassium-transporting ATPase signature | 234 | 254 | - | - | |
| Tan06g0034 | 1084 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 41 | 84 | IPR024750 | GO:0005516(InterPro) | |
| Tan06g0034 | 1084 | CDD | P-type_ATPase_Ca_PMCA-like | 173 | 931 | - | - | |
| Tan06g0034 | 1084 | Pfam | Cation transport ATPase (P-type) | 548 | 626 | - | - | |
| Tan06g0034 | 1084 | PRINTS | P-type cation-transporting ATPase superfamily signature | 713 | 723 | - | - | |
| Tan06g0034 | 1084 | PRINTS | P-type cation-transporting ATPase superfamily signature | 691 | 702 | - | - | |
| Tan06g0034 | 1084 | PRINTS | P-type cation-transporting ATPase superfamily signature | 798 | 817 | - | - | |
| Tan06g0034 | 1084 | PRINTS | P-type cation-transporting ATPase superfamily signature | 491 | 505 | - | - | |
| Tan06g0034 | 1084 | PRINTS | P-type cation-transporting ATPase superfamily signature | 315 | 329 | - | - | |
| Tan06g0034 | 1084 | PRINTS | P-type cation-transporting ATPase superfamily signature | 822 | 834 | - | - | |
| Tan06g0034 | 1084 | NCBIfam | HAD-IC family P-type ATPase | 430 | 514 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan06g0034 | 1084 | NCBIfam | HAD-IC family P-type ATPase | 766 | 878 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan06g0034 | 1084 | Pfam | E1-E2 ATPase | 267 | 469 | - | - | |
| Tan06g0034 | 1084 | SMART | Cation_ATPase_N_a_2 | 147 | 221 | IPR004014 | - | |
| Tan06g0034 | 1084 | SFLD | Haloacid Dehalogenase | 473 | 850 | - | - | |
| Tan06g0034 | 1084 | Gene3D | - | 54 | 107 | - | - | |
| Tan06g0034 | 1084 | Gene3D | - | 172 | 367 | - | - | |
| Tan06g0034 | 1084 | SUPERFAMILY | Calcium ATPase, transduction domain A | 268 | 364 | IPR008250 | - | |
| Tan06g0034 | 1084 | Gene3D | - | 199 | 1051 | - | - | |
| Tan06g0034 | 1084 | SFLD | p-type atpase | 473 | 850 | IPR044492 | - | |
| Tan06g0034 | 1084 | PANTHER | CATION TRANSPORTING ATPASE | 107 | 1062 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Tan06g0034 | 1084 | Pfam | Cation transporting ATPase, C-terminus | 883 | 1059 | IPR006068 | - | |
| Tan06g0034 | 1084 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 493 | 499 | IPR018303 | - | |
| Tan06g0034 | 1084 | FunFam | Calcium-transporting ATPase | 199 | 256 | - | - | |
| Tan06g0034 | 1084 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Tan06g0034 | 1084 | FunFam | Calcium-transporting ATPase | 815 | 1064 | - | - | |
| Tan06g0034 | 1084 | FunFam | Calcium-transporting ATPase | 690 | 843 | - | - | |
| Tan06g0034 | 1084 | Pfam | Cation transporter/ATPase, N-terminus | 148 | 216 | IPR004014 | - | |
| Tan06g0034 | 1084 | FunFam | Calcium-transporting ATPase | 247 | 367 | - | - | |
| Tan06g0034 | 1084 | SUPERFAMILY | HAD-like | 489 | 903 | IPR036412 | - | |
| Tan06g0034 | 1084 | FunFam | Calcium-transporting ATPase | 52 | 108 | - | - | |
| Tan06g0034 | 1084 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 148 | 1062 | IPR023298 | - | |
| Tan06g0034 | 1084 | Gene3D | - | 488 | 843 | IPR023214 | - | |
| Tan06g0034 | 1084 | FunFam | Calcium-transporting ATPase | 501 | 698 | - | - | |
| Tan06g0034 | 1084 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 498 | 695 | IPR023299 | GO:0000166(InterPro) | |
| Tan06g0034 | 1084 | Gene3D | - | 501 | 698 | IPR023299 | GO:0000166(InterPro) | |
| Tan06g0034 | 1084 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 137 | 1062 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Tan06g0034 | 1084 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 345 | 515 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g0034 | Tan-Chr6:593835 | Tan06g0036 | Tan-Chr6:593835 | 0.00E+00 | dispersed | |
| Tan06g0034 | Tan-Chr6:593835 | Tan06g0035 | Tan-Chr6:593835 | 0.00E+00 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g0034 | K01537 | - | csv:101214801 | 1845.09 |