Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0048 ATGAATTGGAGTTGGACGGAACTGGTTTCTCTCATCTTTCTTTGCATTCTGGGGTTGAAGCCTAGCTCCATTCAAGGAGCCACAGATCCATCTGATGCCTCTGCTTTAAGAGTTTTGTACACCAGCTTAAACTCGCCGTCTCAGTTGACCCAGTGGACCGCAAATGGCGATGATCCATGTGGACAATCATGGAAAGGGATTACTTGCTCTGGCTCACGGGTTACAGAAATAATCTTATCTGGCCTCGCGCTCAGTGGATCGCTCGGATACCAGCTCGCAAGTTTGACATCGTTAACCAACCTAGATGTGAGCAATAACAATATTGGAGGCGAAATAGTCTACCAACTTCCACCAAACCTGCAGAGACTAAATCTTGCTCGAAATAACTTCAATAAAGGCATCCCTTATTCCATTTCCTTGATGACTACTCTTCAATACCTAAATCTCAGTCATAATCAGCTTCAGAATCCATTGATTGATATGTTTGGGCAGCTTACTTCCCTATCCACATTGGATTTGTCTTTCAATGCTATGTCAGGCGAACTGCCTCAGAGTTTTAGCTCTCTTTCTAGCATCAGCACTATGTATTTGCAAAACAATCAGTTCACTGGCACAATTAATGTCCTTGCAAATCTTCCTCTTGATAACCTGAATGTTGAAAATAACCGTTTCTCTGGCTGGATCCCTGAGCAACTGAAAAGCATCAATCTGCAGAAAGATGGCAACTCCTGGAACTCAGGTCCTGCCCCCCCTCCTCCACCTGGTACACCTCCAGCCACCAGAAGGAACCGAAATCGCAATTCTGGTGGCAATAGTCCATCAAATGGTGGTTCTGATGAAGGTCAGAAATCAGGAATTAGTGGTGGTGCCATTGCAGGAATTATCATCTCTGTGCTTGTCGTTGGAGCTGTAGTAGCATTCTTCCTTGTCAGGAGGAGATCCAAGAGATCATCTTCGGACATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTTAAAATGACTGCAGCACAAGAAATAAAGTCCGAAGAGACTTCCCCCACATTTTATCCAACAACATTTGACACTTCTGCTGCAATTAATCTTAAACCCCCACCTAGCGATCGTCATAAATCATTTGATGAAGATGACTTTGCAAAGAGACCCGTTGTCAAGAAAGCTAGTGCAGCTCCCATAAATGTAAAGTCATATTCAATAGCAGACCTGCAAATGGCTACAGGCAGCTTCAATGTTGAAAATCTTCTTGGTGAGGGATCGTTTGGACGGGTTTATCGGGCTGAGTTTGATGATGGGAAGATTCTTGCCGTGAAAAAAATAAATTCGTCTGCACTACCTAGGGAATTATCTGAAGATTTCACTGACATTGTTTCAAAAGTCTCCCAGTTACACCATCCCAATATAACTGAGCTTGTGGGTTATTGCTCAGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCATAAAAATGGCTCGCTTTATGACTTCTTGCATCTATCAGATGAATTCAACAAGCCACTGATATGGAATTCCCGTGTTAAAATTGCTTTGGGAACAGCACGGGCATTAGAGTATCTTCATGAAGTTTGTTCCCCATCAATTGTTCATAGAAACATCAAGTCTGCTAACATATTGTTGGATGCCGAACTCAGCCCTCACCTTTCTGATTCTGGACTGGAAAACTTTGTACCAAATGCAGATCAGGCAGTGGATCACAATGCAAGTTCAGGATACATTGCGCCCGAGGTTACGATGTCTGGACAATATACTCTGAACAGCGATGTCTACAGTTTTGGAGTAGTCATGTTGGAACTGCTGACTGGACGCAAACCTTTTGATAGTTCAAGACCGAGGATGGAGCAATCTTTGGTTCGATGGGCTACACCTCAGCTTCATGACATTGATGCTTTGACAAAGATGGTCGATCCAGAACTCAAAGGCCTTTATCCAGTTAAATCTCTCTCCCGATTTGCAGATGTCATTGCACTTTGCGTCCAGACCGAACCTGAGTTCAGACCTCCAATGTCGGAGGTGGTCGAAGCATTAGTTCGTCTGGTACAGCGAGCAAACATGAGTAAGAGAACGATTGGAACTGATAATGCAGCATCTCCCAGAGGGGACATGGGTGGGGAGGACACACCATAA 2142 44.21 MNWSWTELVSLIFLCILGLKPSSIQGATDPSDASALRVLYTSLNSPSQLTQWTANGDDPCGQSWKGITCSGSRVTEIILSGLALSGSLGYQLASLTSLTNLDVSNNNIGGEIVYQLPPNLQRLNLARNNFNKGIPYSISLMTTLQYLNLSHNQLQNPLIDMFGQLTSLSTLDLSFNAMSGELPQSFSSLSSISTMYLQNNQFTGTINVLANLPLDNLNVENNRFSGWIPEQLKSINLQKDGNSWNSGPAPPPPPGTPPATRRNRNRNSGGNSPSNGGSDEGQKSGISGGAIAGIIISVLVVGAVVAFFLVRRRSKRSSSDIEKLDNQPLQPLKMTAAQEIKSEETSPTFYPTTFDTSAAINLKPPPSDRHKSFDEDDFAKRPVVKKASAAPINVKSYSIADLQMATGSFNVENLLGEGSFGRVYRAEFDDGKILAVKKINSSALPRELSEDFTDIVSKVSQLHHPNITELVGYCSEHGQHLLVYEFHKNGSLYDFLHLSDEFNKPLIWNSRVKIALGTARALEYLHEVCSPSIVHRNIKSANILLDAELSPHLSDSGLENFVPNADQAVDHNASSGYIAPEVTMSGQYTLNSDVYSFGVVMLELLTGRKPFDSSRPRMEQSLVRWATPQLHDIDALTKMVDPELKGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTIGTDNAASPRGDMGGEDTP 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 704598 710859 + Tan0011675.1 Tan06g0048 754752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0048 713 SUPERFAMILY L domain-like 28 233 - -
Tan06g0048 713 CDD STKc_IRAK 415 684 - -
Tan06g0048 713 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0048 713 ProSiteProfiles Protein kinase domain profile. 409 684 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0048 713 Gene3D Ribonuclease Inhibitor 29 252 IPR032675 -
Tan06g0048 713 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Tan06g0048 713 Pfam Leucine Rich Repeat 167 189 IPR001611 GO:0005515(InterPro)
Tan06g0048 713 Pfam Leucine Rich Repeat 119 139 IPR001611 GO:0005515(InterPro)
Tan06g0048 713 Pfam Leucine Rich Repeat 144 165 IPR001611 GO:0005515(InterPro)
Tan06g0048 713 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
Tan06g0048 713 MobiDBLite consensus disorder prediction 260 282 - -
Tan06g0048 713 Gene3D Phosphorylase Kinase; domain 1 373 486 - -
Tan06g0048 713 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 374 486 - -
Tan06g0048 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 161 686 IPR046959 -
Tan06g0048 713 MobiDBLite consensus disorder prediction 238 283 - -
Tan06g0048 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 487 695 - -
Tan06g0048 713 MobiDBLite consensus disorder prediction 693 713 - -
Tan06g0048 713 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524(InterPro)
Tan06g0048 713 Gene3D Transferase(Phosphotransferase) domain 1 488 702 - -
Tan06g0048 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 255 - -
Tan06g0048 713 Pfam Leucine Rich repeat 95 113 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0048 Tan-Chr6:704598 Tan11g2046 Tan-Chr11:43040410 1.40E-146 dispersed
Tan04g2828 Tan-Chr4:87719541 Tan06g0048 Tan-Chr6:704598 2.20E-224 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67721 PF07714 PK_Tyr_Ser-Thr 2.10E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0048 - - - 0.0