Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0065 ATGTGGTGGAGATCGGCCTCTTTCATCCTCGACAAGCAGCAAACTGAAGGCGGTTCGAAGCCCCCCGAAACCCTTTCTATCTCCCCGCCCGCGCAATCTTCTATGGCGGACACTTTCCAGAACCCTAACCCTAAAATCTCGGCTTATTACCAAAGTAGGGCTGCCCACACCGCCGTTGTCACCAGTGACTGGCTCGCCCAGGCGCAGGCCGCTGTCGGATTCCAATCCGACGAACAATTCTTGTCGGAAACTGATGTCAGGGACTCTGAATCCGGCAAGCCGTTCAGTGTAATCGATGAGTTTAATAACTGGAGGAAACAGCCGGATTTGGCCGAGGCCGTTGCAGCTATTCGGGCTTTGGCGGCTGTAATACGGTCCAGTCAGGCCACGACTATGATGGAGCTCGAAATTGAACTGAAAAAGGCCTCAGACTCTCTAAAATCGTGGGATACAACTTCGATATCATTAACAGCTGGCTGTGATTTGTTCATGCGATATGTAACTCGAACATCGGCTTTAGAATATGAGGACTTCAAGTCTGCAAAATCTCGCCTGATTGAACGTGCAGAAAAGTTTGGGGAGATTTCTTGTAAGGCACGGAGGATTATTGCAATGCTTAGTCAGGATTTCATTTTTGATGGTTGTACAATTTTGGTCCATGGTTTCTCTAGAGTTGTCATGGAAGTTCTAAGGTTGGCTGCACAGAATAAGAAGCTCTTTAGAGTGTTTTGCACAGAAGGAAGACCAGACAGGACAGGGTTACGTCTATCCAACGAGCTAGCTAAACTTGATGTTCCTGTAAAGCTCCTAATTGACTCAGCAGTAGCGTATACGATGGATGAGGTTGATATGGTGCTAGTTGGGGCTGATGGAGTAGTTGAAAGTGGAGGTATAATCAACATGATGGGCACCTATCAAATTGCAATAGTGGCACATAGCATGAACAAACCGGTGTATGTGGCTGCTGAGAGTTATAAGTTTGCTCGACTCTACCCATTGGATCAGAAAGACATGGCCCCTGCTCTGCGCCCCATCGATTTTGGGGTTCCTATCCCATCCAAGGTTGAAGTTGAAAAATCTGCTCGAGACTATACTCCTCCTCAATACCTTACTCTTCTCTTTACAGATTTGGGCGTTCTTTCTCCATCTGTGGTGAGTGACGAGCTCATCCAACTATATTTATAG 1185 47.17 MWWRSASFILDKQQTEGGSKPPETLSISPPAQSSMADTFQNPNPKISAYYQSRAAHTAVVTSDWLAQAQAAVGFQSDEQFLSETDVRDSESGKPFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSQATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFKSAKSRLIERAEKFGEISCKARRIIAMLSQDFIFDGCTILVHGFSRVVMEVLRLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVLVGADGVVESGGIINMMGTYQIAIVAHSMNKPVYVAAESYKFARLYPLDQKDMAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLSPSVVSDELIQLYL 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 787066 792704 + Tan0000014.1 Tan06g0065 754769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0065 394 Gene3D - 94 195 IPR042528 -
Tan06g0065 394 MobiDBLite consensus disorder prediction 12 35 - -
Tan06g0065 394 Gene3D - 198 394 IPR042529 -
Tan06g0065 394 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 92 394 IPR051501 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
Tan06g0065 394 FunFam Translation initiation factor eIF-2B subunit alpha 93 195 - -
Tan06g0065 394 FunFam Translation initiation factor eIF-2B subunit alpha 198 394 - -
Tan06g0065 394 SUPERFAMILY NagB/RpiA/CoA transferase-like 110 393 IPR037171 -
Tan06g0065 394 Pfam Initiation factor 2 subunit family 107 382 IPR000649 GO:0044237(InterPro)
Tan06g0065 394 Coils Coil 132 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0065 Tan-Chr6:787066 Tan06g0066 Tan-Chr6:787066 1.00E-135 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0065 K03239 - csv:101211420 736.487