Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0066 | ATGTGGTGGAGATCGGCCTCTTTCATCCTCGACAAGCAGCAAACTGAAGGCGGTTCGAAGCCCCCCGAAACCCTTTCTATCTCCCCGCCCGCGCAATCTTCTATGGCGGACACTTTCCAGAACCCTAACCCTAAAATCTCGGCTTATTACCAAAGTAGGGCTGCCCACACCGCCGTTGTCACCAGTGACTGGCTCGCCCAGGCGCAGGCCGCTGTCGGATTCCAATCCGACGAACAATTCTTGTCGGAAACTGATGTCAGGGACTCTGAATCCGGCAAGCCGTTCAGTGTAATCGATGAGTTTAATAACTGGAGGAAACAGCCGGATTTGGCCGAGGCCGTTGCAGCTATTCGGGCTTTGGCGGCTGTAATACGGTCCAGTCAGGCCACGACTATGATGGAGCTCGAAATTGAACTGAAAAAGGCCTCAGACTCTCTAAAATCGTGGGATACAACTTCGATATCATTAACAGCTGGCTGTGATTTGTTCATGCGATATGTAACTCGAACATCGGCTTTAGAATATGAGGACTTCAAGTCTGCAAAATCTCGCCTGATTGAACGTGCAGAAAAGTTTGGGGAGATTTCTTGTAAGGCACGGAGGATTATTGCAATGCTTAGTCAGGATTTCATTTTTGATGGTTGTACAATTTTGGTCCATGGTTTCTCTAGAGTTGTCATGGAAGTTCTAAGGTTGGCTGCACAGAATAAGAAGCTCTTTAGAGTGTTTTGCACAGCTGTTTTGCAGGAAGTGTGTAGAAGTGAAGGTCTGTATAAAAGGGGAGGAGCGAGGAATCACCAACCTGCCATTAAACAACAAGAGTTTGCCAGAAACATGTAG | 840 | 47.86 | MWWRSASFILDKQQTEGGSKPPETLSISPPAQSSMADTFQNPNPKISAYYQSRAAHTAVVTSDWLAQAQAAVGFQSDEQFLSETDVRDSESGKPFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSQATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFKSAKSRLIERAEKFGEISCKARRIIAMLSQDFIFDGCTILVHGFSRVVMEVLRLAAQNKKLFRVFCTAVLQEVCRSEGLYKRGGARNHQPAIKQQEFARNM | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 787066 | 792704 | + | Tan0000014.2 | Tan06g0066 | 754770 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0066 | 279 | MobiDBLite | consensus disorder prediction | 12 | 35 | - | - | |
Tan06g0066 | 279 | Gene3D | - | 197 | 260 | IPR042529 | - | |
Tan06g0066 | 279 | Gene3D | - | 94 | 195 | IPR042528 | - | |
Tan06g0066 | 279 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 96 | 245 | IPR037171 | - | |
Tan06g0066 | 279 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA | 92 | 246 | IPR051501 | GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER) | |
Tan06g0066 | 279 | FunFam | Translation initiation factor eIF-2B subunit alpha | 93 | 195 | - | - | |
Tan06g0066 | 279 | Coils | Coil | 132 | 152 | - | - | |
Tan06g0066 | 279 | Pfam | Initiation factor 2 subunit family | 107 | 245 | IPR000649 | GO:0044237(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0065 | Tan-Chr6:787066 | Tan06g0066 | Tan-Chr6:787066 | 1.00E-135 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0066 | K03239 | - | csv:101211420 | 451.055 |