Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0146 ATGAATTTAGGTGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATTCCGGCTGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCTCTGTTTTCAGGTGTTTCGGCGTCTCTTTACCCTATGGTGGTGTTGAAAACACGGCAACAAGTTGCTCATTCGCAGCTTTCTTGCATCAGAACTGCATTTTCGCTTGTCCGCCATGAGGGGTTTCGAGCTCTCTACAGAGGATTTGGGACTTCTCTGATGGGAACTATTCCTGCTAGAGCTCTGTACATGGGAGCTCTTGAGGTTACAAAGAGCTATGTCGGAACTGCCACTGTTAGAATGGGATTTCCTGAGGCTACTGCTGCTACAATTGCTAATGCAGCTGCTGGATTAAGTGCTGCAATGGCGGCTCAGCTTGTATGGACTCCTGTTGATGTTGTGAGTCAGAGACTGATGGTTCAAAGTAGCTACAATCCTACTGCTCCGAAACCTTCGTCCTCCATTCATTACATCAATGGGATCGATGCCTTTCGAAAAATCCTCAATGCCGATGGTCCCCGAGGCCTCTACCGGGGTTTCGGGATATCGATTTTGACATATGCACCTTCGAATGCGGTGTGGTGGGCTTCTTACTATGTAGCACAGCGACTGGTTTGGGGTGGAATTGGATGCTATTATGCTAAGAAGGTTGGTGAAGGGAATGAAAATGTAGCTAATGTCTACAGACCGGATTTGAAGACCGTGATCGCAGTTCAGGGTGCGAGCGCAGCCATGGCGGGTAGTATCTCAGCTTTGATAACAATGCCTCTTGATACAATCAAGACTAGATTGCAAGTTTTGGATGGGGATGAAAATGGTAGACGAGGACCAACCATTGGACAGACTTTGAGAAATTTAGTAAGGGAAGGCGGATGGTCGGCATGTTACCGAGGTTTGGCGCCCCGGTGCGCGTCGATGTCGATGTCTGCAACAACAATGATCACTACATATGAGTTTCTCAAACGGCTATCAACCAAGAATCAAGAGGGTTTAACAAGCTAA 1047 47.37 MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLSCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEVTKSYVGTATVRMGFPEATAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQSSYNPTAPKPSSSIHYINGIDAFRKILNADGPRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCYYAKKVGEGNENVANVYRPDLKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWSACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQEGLTS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1343377 1345135 - Tan0004053.1 Tan06g0146 754850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0146 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 219 IPR018108 -
Tan06g0146 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 344 - -
Tan06g0146 348 Gene3D Mitochondrial carrier domain 30 346 IPR023395 -
Tan06g0146 348 SUPERFAMILY Mitochondrial carrier 23 335 IPR023395 -
Tan06g0146 348 Pfam Mitochondrial carrier protein 36 110 IPR018108 -
Tan06g0146 348 Pfam Mitochondrial carrier protein 254 341 IPR018108 -
Tan06g0146 348 Pfam Mitochondrial carrier protein 125 220 IPR018108 -
Tan06g0146 348 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085(InterPro)
Tan06g0146 348 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085(InterPro)
Tan06g0146 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 338 IPR018108 -
Tan06g0146 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0146 Tan-Chr6:1343377 Tan11g0423 Tan-Chr11:3418696 8.80E-70 dispersed
Tan05g0522 Tan-Chr5:3603389 Tan06g0146 Tan-Chr6:1343377 1.70E-22 transposed
Tan01g4590 Tan-Chr1:111933046 Tan06g0146 Tan-Chr6:1343377 2.00E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0146 K15121 - csv:101210602 582.408